Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: -
Assembly: GCA_963989225.1
Location: OZ022325.1:42236821-42245131[-]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.79 2.4e+03 0.6 0.1 22 44 191 213 187 221 0.83

2 14 0.071 2.2e+02 4.0 0.1 21 52 218 249 215 251 0.85

3 14 0.12 3.6e+02 3.3 0.3 20 45 273 298 266 305 0.85

4 14 0.28 8.7e+02 2.1 0.3 22 44 303 325 297 334 0.81

5 14 2.4 7.3e+03 -0.9 0.2 21 43 330 352 327 357 0.73

6 14 0.0032 9.9 8.3 0.7 13 44 350 381 339 387 0.85

7 14 0.049 1.5e+02 4.5 0.1 21 45 386 410 383 418 0.88

8 14 0.27 8.3e+02 2.1 0.0 22 44 471 493 462 497 0.86

9 14 0.0018 5.5 9.1 0.1 21 43 498 520 493 525 0.90

10 14 0.21 6.5e+02 2.5 0.0 26 43 533 550 531 556 0.90

11 14 0.12 3.6e+02 3.3 0.1 21 45 556 580 552 583 0.89

12 14 0.0071 22 7.2 0.2 21 44 584 607 573 614 0.84

13 14 0.00037 1.1 11.3 0.1 23 48 614 638 612 644 0.84

14 14 0.002 6.1 9.0 0.1 11 44 657 691 649 695 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.79	2.4e+03	0.6	0.1	22	44	191	213	187	221	0.83
2	14	0.071	2.2e+02	4.0	0.1	21	52	218	249	215	251	0.85
3	14	0.12	3.6e+02	3.3	0.3	20	45	273	298	266	305	0.85
4	14	0.28	8.7e+02	2.1	0.3	22	44	303	325	297	334	0.81
5	14	2.4	7.3e+03	-0.9	0.2	21	43	330	352	327	357	0.73
6	14	0.0032	9.9	8.3	0.7	13	44	350	381	339	387	0.85
7	14	0.049	1.5e+02	4.5	0.1	21	45	386	410	383	418	0.88
8	14	0.27	8.3e+02	2.1	0.0	22	44	471	493	462	497	0.86
9	14	0.0018	5.5	9.1	0.1	21	43	498	520	493	525	0.90
10	14	0.21	6.5e+02	2.5	0.0	26	43	533	550	531	556	0.90
11	14	0.12	3.6e+02	3.3	0.1	21	45	556	580	552	583	0.89
12	14	0.0071	22	7.2	0.2	21	44	584	607	573	614	0.84
13	14	0.00037	1.1	11.3	0.1	23	48	614	638	612	644	0.84
14	14	0.002	6.1	9.0	0.1	11	44	657	691	649	695	0.81

Sequence Information

Coding Sequence: ATGGATGGTATTGATGTAAAAGAAAAAGACAATGGAGAATGTACAATTAAGGAAGATTTTAATAACTTTGAAAAAAACATGCTAGGAGATAATCGTGCAGTGGATGTTTTTTATGCCAAAAAAGATTTTGAGCAGGTATTAATTAAGGAAGAATATATTAGTGATGATGGAGAGCAAGTTGTAGAATGTAATACTGAGAAGACCAATTTATATGTCAAGAAAGAGAGAAATTATGATTTAATAATAGAGAAAGAACTAAATATTTACAGAAATGGCATGCAAGATGTAGGAAATAAAAATGCTATTAACAGTGTTTTCATCAAGGAAGAATTAAATGAAGAATCCATAATACAGGAAGATGCAAATCGATTTGAAAAAGATATGCATGTTGCTCCAAATGAAGATACGACAGATGATTTTTGTTTAAAAGagaaaattaatgaagaatTGATCATTAAAGAAAACTCAACTTCCCAAGAGAATAACATGGAGCAAGATGAATCTGATTCTGAAAATGATACAACTGATACAGaCTGTCAACCAACATCTGCCTGTATCAATTACAAAGAAAAGCGTCCATTTGAATGTCCTACATGTCAAAAAACATTCGATCGTAAAAGTAGTTTGAAGAAACACATATTTATTCACACTGGTGAGAGACCACATGCATGCGATATATGTCAAAAAACATTCACAGAAAGTGGCACTTTGACTAAACACAAACGTATTCACACTAACGAAAAGCCATACGCATGCAATTTCTGTGAAAAAACATTTACTGATAATAGTACTTTAATACAACACAGACGTATTCACACCAACGAGAGGCCATATTCTTGTAATGTttgtgaagaaaaatttaaacaaattggGGCTTTAAACAGACATAGACGTATTCACAGTGGTAACAGACCGTACGCATGTAACATCTGTCTGAAAACTTTTGAACGAAATAGTGATGTAAAAAGACACAAACTTATTCACAGCGGCGAGAAACCATACCAGTGCGAAATCTGTCAGAAAAGATTCACAGAGAACGGTTCTTTGAATAAACATAGACGAATTCATAACAATGATAAACCATACGCTTGTAATATATGTCAGAGAACGTTCATACAGAGTGGAACTTTAAACAGACATATTCTTACTCACACCCAGGAAAGACCATATTCTTGCGAGTTCTGTCAAAAGACATTCGTACAAAGCGGACATTTAAAGAAACACATACTTATTCACAACGGTGAAAGACCATATGAATGTAATAGTTGTCAAGAAACTTTCGCAACAAATGATGCTTTAAAAATGCACAGACTTATCCATAACGAAGAGAAATTttataaatgtgatatttgtgAGAAAACATTCgcagaaatgaaatatttaaataaacataaatttattcacAGTGATAATAAACCATTTGCGTgtgatatttgtcaaaaaacattCGTTCGGAGTACTGATTTGAACAAACATAAAAAGTATCACAGCGAAGAGAAACCATACGTTTGTGATATCTGTCAGAAAACATTCGTACAAAGTTGTGATTTAAAAAGACATCAAATTACTCacaatgaagaaaaattatactTGTATGCTTGTAGTATTTGTCAGAAAACTTTCGAACGAAGTAGTGATTTAAAAAGACATGAATTTACGCATAGCGGTGAAAAACCATACTCTTGTGAAATTTGTCAGAAGAGATTTACAGAGAGTGGTTctttaaaaaatcatatacgtATTCATACTAAAGAAAAACCATATTCCTGTAATATCTGTCAGAAAAGATTCATACAGAGTGGTAGTTTAAATAGGCATAAACTTATTCATATCCGTAAAAAACCACATACATGTAATGTGTGTCAGAAAGTATTTGCacaaattgataatttaaaGAAACACGAACTTCTCCATATCGGTGGAAAACCGTACGAATGTAATATTTGTCAAAAGAAATTCAAAGAGAATGGTACTCTAAAAAAACACAAACGTATTCACACCAACGAGAGACCTTATGCCTGTGATGTCTGCAAGAAAACGTTCGTTCAGAGTGGCACTTTAAACAGACACATCACGCATTGTCGTGAGAagatatga
Protein Sequence: MDGIDVKEKDNGECTIKEDFNNFEKNMLGDNRAVDVFYAKKDFEQVLIKEEYISDDGEQVVECNTEKTNLYVKKERNYDLIIEKELNIYRNGMQDVGNKNAINSVFIKEELNEESIIQEDANRFEKDMHVAPNEDTTDDFCLKEKINEELIIKENSTSQENNMEQDESDSENDTTDTDCQPTSACINYKEKRPFECPTCQKTFDRKSSLKKHIFIHTGERPHACDICQKTFTESGTLTKHKRIHTNEKPYACNFCEKTFTDNSTLIQHRRIHTNERPYSCNVCEEKFKQIGALNRHRRIHSGNRPYACNICLKTFERNSDVKRHKLIHSGEKPYQCEICQKRFTENGSLNKHRRIHNNDKPYACNICQRTFIQSGTLNRHILTHTQERPYSCEFCQKTFVQSGHLKKHILIHNGERPYECNSCQETFATNDALKMHRLIHNEEKFYKCDICEKTFAEMKYLNKHKFIHSDNKPFACDICQKTFVRSTDLNKHKKYHSEEKPYVCDICQKTFVQSCDLKRHQITHNEEKLYLYACSICQKTFERSSDLKRHEFTHSGEKPYSCEICQKRFTESGSLKNHIRIHTKEKPYSCNICQKRFIQSGSLNRHKLIHIRKKPHTCNVCQKVFAQIDNLKKHELLHIGGKPYECNICQKKFKENGTLKKHKRIHTNERPYACDVCKKTFVQSGTLNRHITHCREKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00470135;
90% Identity: iTF_00470135;
80% Identity: iTF_00470135;