Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: -
Assembly: GCA_963989225.1
Location: OZ022325.1:41282812-41285125[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.42 1.3e+03 1.5 0.2 24 46 122 144 117 152 0.74

2 15 8.1 2.5e+04 -2.6 0.0 21 30 147 156 145 160 0.85

3 15 0.72 2.2e+03 0.8 0.0 20 44 174 197 167 206 0.80

4 15 1.4 4.2e+03 -0.1 0.1 21 43 227 249 218 254 0.80

5 15 8.5e-05 0.26 13.3 0.2 21 49 255 283 238 287 0.82

6 15 0.14 4.4e+02 3.0 0.0 22 43 284 305 279 310 0.88

7 15 0.013 39 6.4 0.0 21 50 311 339 308 343 0.87

8 15 0.0053 16 7.6 0.0 26 43 372 389 367 395 0.89

9 15 0.0053 16 7.6 0.3 22 44 396 418 393 426 0.83

10 15 0.72 2.2e+03 0.8 0.1 22 44 424 446 420 454 0.83

11 15 0.016 49 6.1 0.0 23 43 453 473 449 479 0.89

12 15 0.0017 5.3 9.2 0.0 21 45 479 503 477 510 0.85

13 15 0.1 3.1e+02 3.5 0.1 22 51 508 537 504 540 0.82

14 15 0.57 1.7e+03 1.1 0.0 23 44 565 586 560 596 0.85

15 15 0.49 1.5e+03 1.3 0.2 22 46 592 616 587 623 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.42	1.3e+03	1.5	0.2	24	46	122	144	117	152	0.74
2	15	8.1	2.5e+04	-2.6	0.0	21	30	147	156	145	160	0.85
3	15	0.72	2.2e+03	0.8	0.0	20	44	174	197	167	206	0.80
4	15	1.4	4.2e+03	-0.1	0.1	21	43	227	249	218	254	0.80
5	15	8.5e-05	0.26	13.3	0.2	21	49	255	283	238	287	0.82
6	15	0.14	4.4e+02	3.0	0.0	22	43	284	305	279	310	0.88
7	15	0.013	39	6.4	0.0	21	50	311	339	308	343	0.87
8	15	0.0053	16	7.6	0.0	26	43	372	389	367	395	0.89
9	15	0.0053	16	7.6	0.3	22	44	396	418	393	426	0.83
10	15	0.72	2.2e+03	0.8	0.1	22	44	424	446	420	454	0.83
11	15	0.016	49	6.1	0.0	23	43	453	473	449	479	0.89
12	15	0.0017	5.3	9.2	0.0	21	45	479	503	477	510	0.85
13	15	0.1	3.1e+02	3.5	0.1	22	51	508	537	504	540	0.82
14	15	0.57	1.7e+03	1.1	0.0	23	44	565	586	560	596	0.85
15	15	0.49	1.5e+03	1.3	0.2	22	46	592	616	587	623	0.83

Sequence Information

Coding Sequence: ATGTTAGAAAAAGGAATACAAGATTTGAAATATGTAGATACTTCAGAGAATTTTCATGCAgggaaagaaattgaaaaagttaTGATAGAAGAAAAGTTGTACAAAGTCATGCATGAGATAGAATATGTGGATACGGTAGTtgtgaaaaaagaaattaatgagAAATTTATTGTGagagaaaaattcaatatccaAGAAAATGATCCGCAAGGAAACTGTtcaaaaataaaggataaatTTCAGCAAGAACATTCTCACAACATAATTGATAGAAAACAAGATGAAAATGTTACtggaaaaaatattgcaaaagaGACAGaCTCTCTAGCAACATCTGATACTATTATCGACACCGAAGAAATATCATGTGAATGTCCTATTTGTCATAAATCATTTAACGATTTGAAGTCTTTAAATTCTCACAATCGAATCCACAACGGTGAGAAACCATATGCGTGTGATGTATGTCAGAAATCGTTCGTACTAAAAGGTGCTTTAAAAGCACACAAATTAATCCATAACAGTGAAAAACTACATAAGTGTAATGTATGTCAGAAATTTAAATGGAGTAGTAATTTAGAGcgacacaaatttattcacagCGATGGAAAACCATATGAATGTGATGTTTGTCAAATCTCATTTGTTTCCAGAGAAAGACACAAACTTATACAAAGCGGCGAAAAACCGTACATTTGCAATGTCTGTGATAAAAAATTCGTTACTTGTACTGAACTAAATAGACACAAACTTATCCATAGCGGTGAGAAACCACACGTTTGTAGTGTCTGTCAAAAAACATTCTCACAGAGCGGTAATTTAAAGAGACATCAATATATCCACAGCAACAAGAAACCATATTCTTGTGATATCtgtgaaaaatcatttgaatggAGTTGTGATTTAAAAAGGCATAAACTTGTTCATAGTAGTGAAAAACTACACACTTGTGATATCTGTCAGAAAACATTCGCAGATAGTGATAAATTGAAGAAACACGAACTTATTCATAGCAACAAGAAATCATACGCTTGTGCCGTATGTCAGAAAGAGTTCGCTCAAATTAGTGATTTGAATAAACACAAGACTGTTCATATCCGTTTGAAATCTTATTCGTGTGATATTTGCCAGAAATCATTTGAATGGAGTCGTAATTTGAAGAGACACAAACTTATTCACAGCGGTGAAAAATCACACACTTGTAATATCTGTCATAAATCATACGCAGAAAGTTGTAATTTGAAAAAGCACAAACTTATCCATAGCGACAAGAAACCATACGCTTGTAACGTTTGTCAAAGAGATTTCGCTCAAATGATTGATTTAAATAGACACAAACTTATTCACAGCGGTATGAAACCGTATTCTTGTGATATCTGTAAGAAATCTTTTGAATGGAGCAGTAATTTAAAGAGGCACAAACTTATCCACAGCGGCGAAAAGCCATACGCTTGTAATATCTGTCATAAATCATTTGCAGAAAGCAGTAATTTGAAGAAACACAACTTTATCCATAGCAACAAGAAACCATTTGCCTGTAACATTTGTCAAAAAGATTTCGTTCAAATGAGTGATTTAAATAGACATAAACTTGTTCATAACGGTGCAAGACCGTATTCGTGTGATATCTGTAAGAAGACATTCTTACgcaaagaatatttgaaagagCACAAATTAATTCACAGCGGTGGAAAGCCATTTGGCTGCGATATTTGtcagaaaacatttttatacaaTAAGGATTTACAGagacacaaatttattcatagcGGGAAGAGACCATATGTATGTAATGTCTGTCAAAAATCATTTGCAGAAAGTTGTAAATTAGAAAGACATAAAATTATTCACAGCGATGTTAaaccatatactcttgtattatTTGTCAGAAAAAATTCACTCAGAAAAGTAATTTGA
Protein Sequence: MLEKGIQDLKYVDTSENFHAGKEIEKVMIEEKLYKVMHEIEYVDTVVVKKEINEKFIVREKFNIQENDPQGNCSKIKDKFQQEHSHNIIDRKQDENVTGKNIAKETDSLATSDTIIDTEEISCECPICHKSFNDLKSLNSHNRIHNGEKPYACDVCQKSFVLKGALKAHKLIHNSEKLHKCNVCQKFKWSSNLERHKFIHSDGKPYECDVCQISFVSRERHKLIQSGEKPYICNVCDKKFVTCTELNRHKLIHSGEKPHVCSVCQKTFSQSGNLKRHQYIHSNKKPYSCDICEKSFEWSCDLKRHKLVHSSEKLHTCDICQKTFADSDKLKKHELIHSNKKSYACAVCQKEFAQISDLNKHKTVHIRLKSYSCDICQKSFEWSRNLKRHKLIHSGEKSHTCNICHKSYAESCNLKKHKLIHSDKKPYACNVCQRDFAQMIDLNRHKLIHSGMKPYSCDICKKSFEWSSNLKRHKLIHSGEKPYACNICHKSFAESSNLKKHNFIHSNKKPFACNICQKDFVQMSDLNRHKLVHNGARPYSCDICKKTFLRKEYLKEHKLIHSGGKPFGCDICQKTFLYNKDLQRHKFIHSGKRPYVCNVCQKSFAESCKLERHKIIHSDVKPYTLVLFVRKNSLRKVI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00470149;
90% Identity: iTF_00470149;
80% Identity: iTF_00470149;