Dqua010896.2
Basic Information
- Insect
- Dromius quadrimaculatus
- Gene Symbol
- -
- Assembly
- GCA_963989225.1
- Location
- OZ022325.1:66508172-66510784[-]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.007 22 7.2 0.1 21 44 173 196 165 203 0.88 2 21 0.3 9.3e+02 2.0 0.1 20 43 200 223 195 229 0.84 3 21 0.021 64 5.7 0.0 23 44 231 252 224 260 0.86 4 21 0.07 2.1e+02 4.0 0.0 21 45 257 281 254 289 0.85 5 21 0.036 1.1e+02 4.9 0.0 22 48 286 312 283 318 0.83 6 21 0.35 1.1e+03 1.8 0.1 23 47 315 339 309 346 0.82 7 21 0.16 4.8e+02 2.9 0.2 20 44 340 364 335 368 0.86 8 21 2.4e-05 0.075 15.1 0.5 7 44 355 392 351 401 0.81 9 21 4.8 1.5e+04 -1.9 0.0 23 43 399 419 394 424 0.84 10 21 0.11 3.2e+02 3.4 0.1 21 43 425 447 420 452 0.91 11 21 0.00075 2.3 10.3 0.3 21 43 453 475 449 481 0.90 12 21 0.039 1.2e+02 4.8 0.2 23 43 483 503 478 512 0.87 13 21 0.59 1.8e+03 1.0 0.1 21 43 509 531 505 536 0.86 14 21 0.0018 5.6 9.1 0.1 21 43 537 559 532 565 0.90 15 21 0.003 9.3 8.4 0.3 21 43 565 587 560 596 0.88 16 21 0.19 5.9e+02 2.6 0.1 23 43 595 615 590 622 0.89 17 21 0.24 7.4e+02 2.3 0.1 26 43 626 643 620 649 0.87 18 21 0.00072 2.2 10.4 0.2 21 43 649 671 646 678 0.91 19 21 0.015 45 6.2 0.1 22 46 678 702 672 705 0.87 20 21 5.5e-05 0.17 13.9 0.0 21 43 705 727 702 733 0.91 21 21 0.1 3.2e+02 3.5 0.2 21 43 733 755 731 763 0.88
Sequence Information
- Coding Sequence
- ATGATGCATTTGTTTCAGGATTTAAGTTTGGATATTCCTAAATATATTTGTGATGATTGTGAGAATAGTTTGGATAATTGGTacgaattcaaacaaaaatgtttgcAAAATGTTACGCTGTTTAAAAAGTATGTGCAGGGAATAACAAAGGAAGGCGgtgcttataaaaatttgacAGTCTTGATAGATGCAAATTCTagatatgataataaaattgatgatgATAAAGAAGAAGAAGTGGAGATTTcggatgatgatgataattattttgaattctttagtGGGACTAATTTGGAAATAATTGATAGTAAGGAGTTTATTGTTGAACATGGCATTGATAAGGAGGTTATAccggaagaaaattttgacattttgcaaGAAATTAAGCAGGAAGATCCTTTATTGGATCAAGCAGAAAATATTgtggatgaaaataaaaagtcaTTGACTTGTGATTTTTGTGGGAAGGATTTTAGGTCGCTTTTTCATTTGCAGCATCATAGATATATTCACACCGGTGAAAAGCCgtataaatgtgatatttgcGACAGGTCATTTAGACAGTTTGTTAATTTAAAAACGCATCGTCGGACGCATAAAAGCAAAAAAActtttaattgtaaaatatgtaataagtGGTTTAGACATCCgtcaaatttaaaaatgcaCAAATTGGTGCACACTGACATAAGGCCTTACAAGTGTGAAGTTTGCGGCAAATCATTCCGACAAGCCAATAATTTAAAACATCACCAGTTTATTCACACAGGGGAGAAACCTTACGAGTGTGACGTTTGCGAGAAGTCTTTCAGGCAGCCGAAAACTTTAACGCAACATAAAATGGTTCACACAGGACAAAAACCTTTCAAGTGTGACGTTTGTGGCAAATCATTCCGGCAAATAACTAATTTAAAATCGCACCAGCATACGCATTCTGATGCCAGGCCGTTTACTTGTGTTTTATGCAATAAATCGTTTAAACAAATCGCGCATTTGAAGGCGCATCAAagtatacacactggtgaaaaaccatacaGTTGTGACGTTTGCAGCAAATCGTTTAGACACCCGAAAACTTTACAACAGCATAAATTGTTGCACACAGGCGAAAAACCTTTTACTTGCGAAATATGTAATAAAACGTTTAGACAAATACCGAATTTGCGGGCGCACCAGCTCAcacataccgacatcaaaccattTGAGTGTGAAACGTGCAAAAAAACGTTTAGACAAATTAGTCACCTGAAGTTGCATCAATTGACGCACACCGGCGAAAAACCCTACAAGTGTGAAGTTTGCAGCAAAGCGTTCCGACATGTCAACACTTTAAGGCAGCACAAATTTGTGCACACAGGCGAAAAACCTTAcaaatgtaaaatttgtaataaatcctTCAGGCAAATTCCTAATTTGCGTCAGCACCAATTGACGCACACTAATATTAAACCACATACttgtaatatttgtaataaatcgTTTAGACAAATTAATCATTTGACTTCGCATCAATTTACGCACACCGGAGAAAAGCCTTTTGCCTGTAAAGTTTGCAACGAGACTTTCCGCCACCAATCGACTTTAAGCCAGCATAAATTGGTACACTCCGACGAAAAACCGCAtacgtgtgaagtttgcaacgcGTCTTTCCGCCACGCAGCAACTTTAAAGCAACACAAATTGGTTCACACTGGCGAAAAACCCCACAagtgtgaaatttgcaacaaagcGTTCAGACAACAAAGCAATTTAATTCAGCACCGATTAACTCATTCCGGAATAAAGCCTCACAAATGTGAAgtatgcaacaaatcattcagacaaATGGGGCACCTGCGCGCGCATCGTTTCGTCCACACCGGCGTTAAAACCCACAAATGTGAAGTTTGCAGCAAATTATTCCGCAATACAAAAAGCTTACGTCAACATGAAATGGtgcacactggtgaaaaacctttCACGTGTGAAATATGCCAACAAACGTTCAGACAAATGGCCCATTTAAGAGCCCACCGTTTCACGCATTCTGGTAAAAAGCCTCATAAATGTGAAGTTTGCGACAAATCATTCCGGCACCCGAGAAACCTACAACAACACAAAATGCTCCACACGGGAGAAAAACCTTTCACGTGCCCAATTTGCAATAAATCTTTCAGGCAAGTTGGCAATTTTAAACACCACCAATTTATTCACACCGGAGAAAAACCCTACTCCTGCGAACTGTGCAATAAGTCATTCCGGCAGCCACAAACCCTCAACCAACACGAAATAAAAGTCCACTCCAAATATAAATTCGAATGCAAGGATTGCGTGAGAGGATTCCCCAAAAAATCCACCCTCCAAAGACATTTATTCAAATTCCACCGACAAAAACCTCAAGATCCATTATTAACAGACCCTCTACCAAAAGTGGAGCTCCCCGAAAATAATTTGTGCACTAAAGTGAGCATAACTGAAAACGGGCAAAAGTTGAGAGTTCATAATGGGCCTATTCCCTATTCTTGTACGCATTGTTGCCAATCATAcacacaaattattcatttatgtcCGCCTATTCAAGAAAATGAAGCGAAGAAAGAAATTCcggaagaaaatttattagtaaTGAATTGA
- Protein Sequence
- MMHLFQDLSLDIPKYICDDCENSLDNWYEFKQKCLQNVTLFKKYVQGITKEGGAYKNLTVLIDANSRYDNKIDDDKEEEVEISDDDDNYFEFFSGTNLEIIDSKEFIVEHGIDKEVIPEENFDILQEIKQEDPLLDQAENIVDENKKSLTCDFCGKDFRSLFHLQHHRYIHTGEKPYKCDICDRSFRQFVNLKTHRRTHKSKKTFNCKICNKWFRHPSNLKMHKLVHTDIRPYKCEVCGKSFRQANNLKHHQFIHTGEKPYECDVCEKSFRQPKTLTQHKMVHTGQKPFKCDVCGKSFRQITNLKSHQHTHSDARPFTCVLCNKSFKQIAHLKAHQSIHTGEKPYSCDVCSKSFRHPKTLQQHKLLHTGEKPFTCEICNKTFRQIPNLRAHQLTHTDIKPFECETCKKTFRQISHLKLHQLTHTGEKPYKCEVCSKAFRHVNTLRQHKFVHTGEKPYKCKICNKSFRQIPNLRQHQLTHTNIKPHTCNICNKSFRQINHLTSHQFTHTGEKPFACKVCNETFRHQSTLSQHKLVHSDEKPHTCEVCNASFRHAATLKQHKLVHTGEKPHKCEICNKAFRQQSNLIQHRLTHSGIKPHKCEVCNKSFRQMGHLRAHRFVHTGVKTHKCEVCSKLFRNTKSLRQHEMVHTGEKPFTCEICQQTFRQMAHLRAHRFTHSGKKPHKCEVCDKSFRHPRNLQQHKMLHTGEKPFTCPICNKSFRQVGNFKHHQFIHTGEKPYSCELCNKSFRQPQTLNQHEIKVHSKYKFECKDCVRGFPKKSTLQRHLFKFHRQKPQDPLLTDPLPKVELPENNLCTKVSITENGQKLRVHNGPIPYSCTHCCQSYTQIIHLCPPIQENEAKKEIPEENLLVMN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00470134;
- 90% Identity
- iTF_00470134;
- 80% Identity
- iTF_00470134;