Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: -
Assembly: GCA_963989225.1
Location: OZ022325.1:66508172-66510784[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 4.4 7.9e+02 2.7 0.2 1 17 15 31 15 32 0.89

2 24 0.00084 0.15 14.4 4.8 2 23 150 171 149 171 0.95

3 24 2.8e-07 5.1e-05 25.4 2.8 1 23 177 199 177 199 0.99

4 24 0.00017 0.031 16.6 2.8 1 23 205 227 205 227 0.97

5 24 2.6e-07 4.8e-05 25.5 2.7 1 23 233 255 233 255 0.98

6 24 2.5e-06 0.00045 22.4 0.7 1 23 261 283 261 283 0.98

7 24 1.1e-06 0.0002 23.5 3.6 1 23 289 311 289 311 0.99

8 24 1.5e-05 0.0028 19.9 1.7 1 23 317 339 317 339 0.98

9 24 4.8e-05 0.0087 18.3 3.0 1 23 345 367 345 367 0.97

10 24 5e-07 9e-05 24.6 0.6 1 23 373 395 373 395 0.98

11 24 8.4e-06 0.0015 20.7 4.0 1 23 401 423 401 423 0.98

12 24 0.00076 0.14 14.6 3.2 1 23 429 451 429 451 0.97

13 24 3.5e-07 6.4e-05 25.1 1.8 1 23 457 479 457 479 0.99

14 24 8.3e-05 0.015 17.6 6.4 1 23 485 507 485 507 0.98

15 24 5.1e-05 0.0093 18.3 2.6 1 23 513 535 513 535 0.96

16 24 0.00026 0.047 16.0 2.3 1 23 541 563 541 563 0.97

17 24 2.1e-07 3.8e-05 25.8 2.5 1 23 569 591 569 591 0.98

18 24 5e-05 0.0092 18.3 4.3 1 23 597 619 597 619 0.97

19 24 0.0013 0.23 13.9 2.9 1 23 625 647 625 647 0.97

20 24 5.1e-05 0.0093 18.3 3.0 1 23 653 675 653 675 0.98

21 24 7.2e-06 0.0013 20.9 4.7 1 23 681 703 681 703 0.97

22 24 5.6e-06 0.001 21.3 3.1 1 23 709 731 709 731 0.97

23 24 1.5e-05 0.0028 19.9 0.6 1 23 737 760 737 760 0.95

24 24 0.00011 0.021 17.2 1.9 1 23 765 788 765 788 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	4.4	7.9e+02	2.7	0.2	1	17	15	31	15	32	0.89
2	24	0.00084	0.15	14.4	4.8	2	23	150	171	149	171	0.95
3	24	2.8e-07	5.1e-05	25.4	2.8	1	23	177	199	177	199	0.99
4	24	0.00017	0.031	16.6	2.8	1	23	205	227	205	227	0.97
5	24	2.6e-07	4.8e-05	25.5	2.7	1	23	233	255	233	255	0.98
6	24	2.5e-06	0.00045	22.4	0.7	1	23	261	283	261	283	0.98
7	24	1.1e-06	0.0002	23.5	3.6	1	23	289	311	289	311	0.99
8	24	1.5e-05	0.0028	19.9	1.7	1	23	317	339	317	339	0.98
9	24	4.8e-05	0.0087	18.3	3.0	1	23	345	367	345	367	0.97
10	24	5e-07	9e-05	24.6	0.6	1	23	373	395	373	395	0.98
11	24	8.4e-06	0.0015	20.7	4.0	1	23	401	423	401	423	0.98
12	24	0.00076	0.14	14.6	3.2	1	23	429	451	429	451	0.97
13	24	3.5e-07	6.4e-05	25.1	1.8	1	23	457	479	457	479	0.99
14	24	8.3e-05	0.015	17.6	6.4	1	23	485	507	485	507	0.98
15	24	5.1e-05	0.0093	18.3	2.6	1	23	513	535	513	535	0.96
16	24	0.00026	0.047	16.0	2.3	1	23	541	563	541	563	0.97
17	24	2.1e-07	3.8e-05	25.8	2.5	1	23	569	591	569	591	0.98
18	24	5e-05	0.0092	18.3	4.3	1	23	597	619	597	619	0.97
19	24	0.0013	0.23	13.9	2.9	1	23	625	647	625	647	0.97
20	24	5.1e-05	0.0093	18.3	3.0	1	23	653	675	653	675	0.98
21	24	7.2e-06	0.0013	20.9	4.7	1	23	681	703	681	703	0.97
22	24	5.6e-06	0.001	21.3	3.1	1	23	709	731	709	731	0.97
23	24	1.5e-05	0.0028	19.9	0.6	1	23	737	760	737	760	0.95
24	24	0.00011	0.021	17.2	1.9	1	23	765	788	765	788	0.96

Sequence Information

Coding Sequence: ATGATGCATTTGTTTCAGGATTTAAGTTTGGATATTCCTAAATATATTTGTGATGATTGTGAGAATAGTTTGGATAATTGGTacgaattcaaacaaaaatgtttgcAAAATGTTACGCTGTTTAAAAAGTATGTGCAGGGAATAACAAAGGAAGGCGgtgcttataaaaatttgacAGTCTTGATAGATGCAAATTCTagatatgataataaaattgatgatgATAAAGAAGAAGAAGTGGAGATTTcggatgatgatgataattattttgaattctttagtGGGACTAATTTGGAAATAATTGATAGTAAGGAGTTTATTGTTGAACATGGCATTGATAAGGAGGTTATAccggaagaaaattttgacattttgcaaGAAATTAAGCAGGAAGATCCTTTATTGGATCAAGCAGAAAATATTgtggatgaaaataaaaagtcaTTGACTTGTGATTTTTGTGGGAAGGATTTTAGGTCGCTTTTTCATTTGCAGCATCATAGATATATTCACACCGGTGAAAAGCCgtataaatgtgatatttgcGACAGGTCATTTAGACAGTTTGTTAATTTAAAAACGCATCGTCGGACGCATAAAAGCAAAAAAActtttaattgtaaaatatgtaataagtGGTTTAGACATCCgtcaaatttaaaaatgcaCAAATTGGTGCACACTGACATAAGGCCTTACAAGTGTGAAGTTTGCGGCAAATCATTCCGACAAGCCAATAATTTAAAACATCACCAGTTTATTCACACAGGGGAGAAACCTTACGAGTGTGACGTTTGCGAGAAGTCTTTCAGGCAGCCGAAAACTTTAACGCAACATAAAATGGTTCACACAGGACAAAAACCTTTCAAGTGTGACGTTTGTGGCAAATCATTCCGGCAAATAACTAATTTAAAATCGCACCAGCATACGCATTCTGATGCCAGGCCGTTTACTTGTGTTTTATGCAATAAATCGTTTAAACAAATCGCGCATTTGAAGGCGCATCAAagtatacacactggtgaaaaaccatacaGTTGTGACGTTTGCAGCAAATCGTTTAGACACCCGAAAACTTTACAACAGCATAAATTGTTGCACACAGGCGAAAAACCTTTTACTTGCGAAATATGTAATAAAACGTTTAGACAAATACCGAATTTGCGGGCGCACCAGCTCAcacataccgacatcaaaccattTGAGTGTGAAACGTGCAAAAAAACGTTTAGACAAATTAGTCACCTGAAGTTGCATCAATTGACGCACACCGGCGAAAAACCCTACAAGTGTGAAGTTTGCAGCAAAGCGTTCCGACATGTCAACACTTTAAGGCAGCACAAATTTGTGCACACAGGCGAAAAACCTTAcaaatgtaaaatttgtaataaatcctTCAGGCAAATTCCTAATTTGCGTCAGCACCAATTGACGCACACTAATATTAAACCACATACttgtaatatttgtaataaatcgTTTAGACAAATTAATCATTTGACTTCGCATCAATTTACGCACACCGGAGAAAAGCCTTTTGCCTGTAAAGTTTGCAACGAGACTTTCCGCCACCAATCGACTTTAAGCCAGCATAAATTGGTACACTCCGACGAAAAACCGCAtacgtgtgaagtttgcaacgcGTCTTTCCGCCACGCAGCAACTTTAAAGCAACACAAATTGGTTCACACTGGCGAAAAACCCCACAagtgtgaaatttgcaacaaagcGTTCAGACAACAAAGCAATTTAATTCAGCACCGATTAACTCATTCCGGAATAAAGCCTCACAAATGTGAAgtatgcaacaaatcattcagacaaATGGGGCACCTGCGCGCGCATCGTTTCGTCCACACCGGCGTTAAAACCCACAAATGTGAAGTTTGCAGCAAATTATTCCGCAATACAAAAAGCTTACGTCAACATGAAATGGtgcacactggtgaaaaacctttCACGTGTGAAATATGCCAACAAACGTTCAGACAAATGGCCCATTTAAGAGCCCACCGTTTCACGCATTCTGGTAAAAAGCCTCATAAATGTGAAGTTTGCGACAAATCATTCCGGCACCCGAGAAACCTACAACAACACAAAATGCTCCACACGGGAGAAAAACCTTTCACGTGCCCAATTTGCAATAAATCTTTCAGGCAAGTTGGCAATTTTAAACACCACCAATTTATTCACACCGGAGAAAAACCCTACTCCTGCGAACTGTGCAATAAGTCATTCCGGCAGCCACAAACCCTCAACCAACACGAAATAAAAGTCCACTCCAAATATAAATTCGAATGCAAGGATTGCGTGAGAGGATTCCCCAAAAAATCCACCCTCCAAAGACATTTATTCAAATTCCACCGACAAAAACCTCAAGATCCATTATTAACAGACCCTCTACCAAAAGTGGAGCTCCCCGAAAATAATTTGTGCACTAAAGTGAGCATAACTGAAAACGGGCAAAAGTTGAGAGTTCATAATGGGCCTATTCCCTATTCTTGTACGCATTGTTGCCAATCATAcacacaaattattcatttatgtcCGCCTATTCAAGAAAATGAAGCGAAGAAAGAAATTCcggaagaaaatttattagtaaTGAATTGA
Protein Sequence: MMHLFQDLSLDIPKYICDDCENSLDNWYEFKQKCLQNVTLFKKYVQGITKEGGAYKNLTVLIDANSRYDNKIDDDKEEEVEISDDDDNYFEFFSGTNLEIIDSKEFIVEHGIDKEVIPEENFDILQEIKQEDPLLDQAENIVDENKKSLTCDFCGKDFRSLFHLQHHRYIHTGEKPYKCDICDRSFRQFVNLKTHRRTHKSKKTFNCKICNKWFRHPSNLKMHKLVHTDIRPYKCEVCGKSFRQANNLKHHQFIHTGEKPYECDVCEKSFRQPKTLTQHKMVHTGQKPFKCDVCGKSFRQITNLKSHQHTHSDARPFTCVLCNKSFKQIAHLKAHQSIHTGEKPYSCDVCSKSFRHPKTLQQHKLLHTGEKPFTCEICNKTFRQIPNLRAHQLTHTDIKPFECETCKKTFRQISHLKLHQLTHTGEKPYKCEVCSKAFRHVNTLRQHKFVHTGEKPYKCKICNKSFRQIPNLRQHQLTHTNIKPHTCNICNKSFRQINHLTSHQFTHTGEKPFACKVCNETFRHQSTLSQHKLVHSDEKPHTCEVCNASFRHAATLKQHKLVHTGEKPHKCEICNKAFRQQSNLIQHRLTHSGIKPHKCEVCNKSFRQMGHLRAHRFVHTGVKTHKCEVCSKLFRNTKSLRQHEMVHTGEKPFTCEICQQTFRQMAHLRAHRFTHSGKKPHKCEVCDKSFRHPRNLQQHKMLHTGEKPFTCPICNKSFRQVGNFKHHQFIHTGEKPYSCELCNKSFRQPQTLNQHEIKVHSKYKFECKDCVRGFPKKSTLQRHLFKFHRQKPQDPLLTDPLPKVELPENNLCTKVSITENGQKLRVHNGPIPYSCTHCCQSYTQIIHLCPPIQENEAKKEIPEENLLVMN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00470516;
90% Identity: iTF_00470516;
80% Identity: iTF_00470516;