Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: -
Assembly: GCA_963989225.1
Location: OZ022331.1:25267149-25285987[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.4e-05 0.0026 20.0 1.7 1 23 167 189 167 189 0.98

2 16 3.6e-07 6.6e-05 25.0 2.5 1 23 194 216 194 216 0.98

3 16 3.2e-05 0.0057 18.9 4.3 1 23 222 244 222 244 0.97

4 16 7.3e-05 0.013 17.8 1.3 1 21 250 270 250 271 0.95

5 16 1.2e-06 0.00021 23.4 0.2 1 23 278 300 278 300 0.97

6 16 0.00078 0.14 14.5 0.1 1 23 448 470 448 470 0.98

7 16 5.3e-06 0.00096 21.4 6.5 1 23 476 498 476 498 0.96

8 16 6.9e-07 0.00013 24.1 1.7 1 23 504 526 504 526 0.98

9 16 3.5e-05 0.0063 18.8 0.7 1 23 532 555 532 555 0.95

10 16 0.0017 0.31 13.5 0.9 1 23 567 589 567 589 0.98

11 16 3.3e-06 0.0006 22.0 3.9 1 23 595 617 595 617 0.97

12 16 2.5e-06 0.00045 22.4 0.5 1 23 624 646 624 646 0.96

13 16 3.1e-06 0.00057 22.1 1.2 1 23 652 674 652 674 0.98

14 16 4.6e-07 8.5e-05 24.7 0.9 3 23 682 702 680 702 0.96

15 16 2.3e-05 0.0041 19.4 0.1 1 23 708 730 708 730 0.99

16 16 0.021 3.8 10.1 0.6 1 23 735 758 735 758 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.4e-05	0.0026	20.0	1.7	1	23	167	189	167	189	0.98
2	16	3.6e-07	6.6e-05	25.0	2.5	1	23	194	216	194	216	0.98
3	16	3.2e-05	0.0057	18.9	4.3	1	23	222	244	222	244	0.97
4	16	7.3e-05	0.013	17.8	1.3	1	21	250	270	250	271	0.95
5	16	1.2e-06	0.00021	23.4	0.2	1	23	278	300	278	300	0.97
6	16	0.00078	0.14	14.5	0.1	1	23	448	470	448	470	0.98
7	16	5.3e-06	0.00096	21.4	6.5	1	23	476	498	476	498	0.96
8	16	6.9e-07	0.00013	24.1	1.7	1	23	504	526	504	526	0.98
9	16	3.5e-05	0.0063	18.8	0.7	1	23	532	555	532	555	0.95
10	16	0.0017	0.31	13.5	0.9	1	23	567	589	567	589	0.98
11	16	3.3e-06	0.0006	22.0	3.9	1	23	595	617	595	617	0.97
12	16	2.5e-06	0.00045	22.4	0.5	1	23	624	646	624	646	0.96
13	16	3.1e-06	0.00057	22.1	1.2	1	23	652	674	652	674	0.98
14	16	4.6e-07	8.5e-05	24.7	0.9	3	23	682	702	680	702	0.96
15	16	2.3e-05	0.0041	19.4	0.1	1	23	708	730	708	730	0.99
16	16	0.021	3.8	10.1	0.6	1	23	735	758	735	758	0.97

Sequence Information

Coding Sequence: ATGGATCATTGTGAATATGATTTTAATCGTATATGTCGTGCTTGTAAGTGTGAATCGCGAGATATGTGTTCTGTGTTCGAAAGAAACGAAGCAACAGGGCGGAATGCCCGTTTTGACGAGATGCTAATGGCGTGCGCCTCTGTTCAGATCAATTCCAATGATGGGTTGCCAGGTTATATCTGTCAAAAATGTGTCAAATCTTTGATTGATGCTTATGTTTTCAAGCATCAGTGTGAATCAACGGATTCAAGTTTACGAGACTATCTAAAATCAAAAGGAATAAAGCAAGAGCATCATTCTACAAATCAAAACAATGACCAAGAACTTCATAACCAACTTCTGGATTTTAGCGCCATGTATAATGAGCTTCAAGCAAAAGCTGCAGAAGGTGCTGTTGGTGTTAAAGTTGATCCGGATTTTACAGCCACCATAGACTGCGATGTACAATTAAAAAGTAACCGAGATTATGTTGAAATAATCgacaatgataaaataatttttacttgtaaTACTTGTAATAAAGTTTTTTATACTCTAGAAGGCTTGAAAAGTCATAAAAGAATTCACACAGGAGAGATGTACAAATGCAACATTTGCAATAAGGAGTACACACGAGCAAATCATTTACAAAGACATATGGCTTCTCATGGTCGAAGAAAAGTTCACATCtgtaaaatttgcaacaaaaccTTAACAAGATTAGAACATCTTAAACGTCATTTGATAACGCACATGAAAAACAAACCATTCCAGTGTGAAATGTGCAAACGAGGATTTAACCGCTCCGAACACTTAATGAATCATGTAAAAAGATGCAAAGGCGATAAAATTTACGCATGCGAAGTATGTAATAAAGGCTTTACGCGAACTGATAGCTTAGAAGTTCATATGAGGCTGCATGAAAATAAAGCTCCAGTTTTGCCCACTTTAGAAACATTAGATAATATTCATGAGCATTACATTGAAGTGGATGATTATTCAGGAAAATCAGAATCTGAACATTCAGATCAAGACGGTTTTTCTGACCATGATGACGGGGGTGACGATCAAGATTGTTTTGAACCACAAGTTGATATTCTGGAAAATGCAGAAGAAGTTAAAATTGAACCACGAGGCGAACAAACATCAGAAGCTGAAGCTTTCCTGGCAGCTTTAACCGAAAAAAGTGATATTGAGAATTTCGATGATAACGATAATGATACTGATGATTCAGAATATTTGCCGAATAGAGTTAATAAACCTAAAAGAAAACGAGGTAGGCCTcgaaaacacaaaattaaaatcaaaagagAAAGAAGAGGAAGAATACCAAAAGAAGAAAGGATTGATGAACCGGGTGAATTCCCGTGCACTGTTTGCAATAAAGTATTGTCTACTGCTATTGGGTTAGAAATTCACAACAGGAAACACAGCGGTTTGAAGTTGCACAATTGCAAAATTTGCCAAAAGAAATTCACCCGTTCCAATCACCTAAAGCGTCACATGATAATCCATTCTGAACATAAGCCCTATACTTGTACAATTTGTCCGAAAGCGTTTTCTCGAAGAGATCACATGGCCCAACATATGAAACTACATACACAATCTAAGGAATTCGAGTGTGATATTTGCAAACGTCCTTTTGCTCGAGCAGAGCATTTAGCTAAGCATAAAGCTTCAAAACATAATATTGGAGTAAAGATAATGaacgaaaaaaaatataaatgttccatttgtTTGAAAGGATTCACAACAGAAAAATATAGAGACGTGCATATGCGTGGACATAATGGAGAAAAGAAATACAACTGCAAAGTTTGCGAGAAAACGTTTATTTCTAAATCTCACTTGACCGAACACATGAAATTCCATAACGAACATTCAAAGAAATTCTTGTGTTCTGAATGTGGACAGAGATTTATAAGAAACGATTATTTAGTTATCCATATGAGACGACATcgtggtgaaaaaccattcaagTGTAAATACTGTGGCAAAGGTTTTCCCCGCACAACAGACCTCACAGTTCATGAGCGTTATCACACTGGCGAAAAAACTCATTTATGCACAATCTGTGGTCGTGGTTTCGGCCGGGCCTATAATTTAACTGTACACATGCGAACCCATACAGGTGAAAAACCGTATCAATGTACTTATTGTGATGCAGCTTTCGCTCAAGGTAACGACTTGAAAGCTCATGTACGGCGGCACACTGGTGAACGTTTCCAGTGTGATATTTGTACAGAGAGCTTCTTGATGGGATATTTACTCACTCAACACAAGAGGACTGTTCATGGCATACAGgtGGTGTCAAATATTAGAAGACTACAACAATTTCCGCCGCCTCAACCTCCACCGCAGCAGCTACCACAACAACCTTTACCTCAACAAATACCGTTACCTATCCCAATTCACGTTCTACCGGTACCGCAAGTACCAGTAGTAGTACCATCAGTGGTGTCTTCAATAGTACCGACTCTTGCAACATCCACCGTTCTTCAAACACCGCAACAGCCATCCCTAGTTGAGTGA
Protein Sequence: MDHCEYDFNRICRACKCESRDMCSVFERNEATGRNARFDEMLMACASVQINSNDGLPGYICQKCVKSLIDAYVFKHQCESTDSSLRDYLKSKGIKQEHHSTNQNNDQELHNQLLDFSAMYNELQAKAAEGAVGVKVDPDFTATIDCDVQLKSNRDYVEIIDNDKIIFTCNTCNKVFYTLEGLKSHKRIHTGEMYKCNICNKEYTRANHLQRHMASHGRRKVHICKICNKTLTRLEHLKRHLITHMKNKPFQCEMCKRGFNRSEHLMNHVKRCKGDKIYACEVCNKGFTRTDSLEVHMRLHENKAPVLPTLETLDNIHEHYIEVDDYSGKSESEHSDQDGFSDHDDGGDDQDCFEPQVDILENAEEVKIEPRGEQTSEAEAFLAALTEKSDIENFDDNDNDTDDSEYLPNRVNKPKRKRGRPRKHKIKIKRERRGRIPKEERIDEPGEFPCTVCNKVLSTAIGLEIHNRKHSGLKLHNCKICQKKFTRSNHLKRHMIIHSEHKPYTCTICPKAFSRRDHMAQHMKLHTQSKEFECDICKRPFARAEHLAKHKASKHNIGVKIMNEKKYKCSICLKGFTTEKYRDVHMRGHNGEKKYNCKVCEKTFISKSHLTEHMKFHNEHSKKFLCSECGQRFIRNDYLVIHMRRHRGEKPFKCKYCGKGFPRTTDLTVHERYHTGEKTHLCTICGRGFGRAYNLTVHMRTHTGEKPYQCTYCDAAFAQGNDLKAHVRRHTGERFQCDICTESFLMGYLLTQHKRTVHGIQVVSNIRRLQQFPPPQPPPQQLPQQPLPQQIPLPIPIHVLPVPQVPVVVPSVVSSIVPTLATSTVLQTPQQPSLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01229903;
90% Identity: iTF_00767416;
80% Identity: -