Dqua023290.1
Basic Information
- Insect
- Dromius quadrimaculatus
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_963989225.1
- Location
- OZ022327.1:49063115-49071943[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.19 1.4e+04 -3.0 1.3 30 71 29 70 18 93 0.54 2 3 5.8e-115 4.1e-110 369.7 32.8 1 300 99 407 99 407 0.91 3 3 0.055 3.9e+03 -1.2 6.3 193 238 437 481 416 482 0.65
Sequence Information
- Coding Sequence
- ATGAGCCAGCAAGAAATGGGTGGTGTTACAAGTGATCAGTGCAAAACTAAAAACTCCGAAGTTCAAACTGTTCAACTCGAAGGAGTAACAGAAAATGAAACCAATGATTTTGAAGagcaaaatttaaatgatagcGGCCACCAAGAGACGGATTCTTCTGAAGAAAGTGAAGGTCTTGATCCTGAAAGATTCACTAAAAGAAGACGTACTCTTAGTCGAGTTGATACTGTGGAAGATACCGAAGAAGCTGATAATGAgtgcataaataattttttggataaatgcACAGATCAAGCTGAAGCTCGGCTAGCAGCTCGCCGCCAGGCCCGTGCCGAGGCACGTGAGATTCGAATGCGAGAGCTGGAGCGACAACAACGTGAACAAGAAGAAAATGCTGATCGAGCCTATGACATGCTGGCTGAACCAGTAACACGTAGTGGAAGAGCTTCCTCGACGACACCTCATCGAATCGCAGCCACGGGGTTGACAAATAGTTCATACCTCTCCAGCAGGAGGAGCTCGGAGGACTCCCTCGAAGATGGAGGAAGTCTTCGAGACGTCCGGcaTGAGCTGAAAGAACTGGAAGATAAATTCCGGAAAGCAATGATAGCGAATGCTCAACTAGATAATGATAAGGCTGCACAGACTTACCAATTAGAACTCCTTAAAGATAGAATAGAAGAGCTTGAAGAAGAGTACTCTCAATTAAAACGAGAACATAGAGAAACCTGTCGAGAACATGATCAACTTAAACGAGTGTCAGTTAGATTAAAAGAAGAACTAGCCGCTTTTAAAACAGATCTTGAAGAACGAGATCGGCTTATTGCGGAAAAGGGACTGGTAATTGTGGGAGAAGTTATATCTGAAGATGAAAAAGGGGCTGATAACAACACGCCGAAAACTCCAAAGAAAGCTTTAGTTAGTATGGAAAACGCTGAAATGTTGGAGAATGCTGGAGAGGGAAGCTTagATGTACGGTTAAAACGTTTCGCAGAAGAAAAGCGAGACCTAATGGACCAGTTAAGTCACCTTAGATTAGAATTAGAAGAAGAAAGAAGCAGAAGAAAACGTAGAACTAGTTCTATGAACAATGCTTCTTTGCAAAATGGGCCTTGTTTAGAAGCAGACGGaattgatgttattgatgttcaAAGAGAAGCAAATAAGCAATTAGCAGACTATAAATTCCGCTTACAAAAATCGGAACAAGACATTGCGACGTTGCAGGCAACGGTAGCAAGGTTAGAAAGTCAAGTAATCCGCTATAAATCAGCTGCAGAAGCGTCAGAAAAAGCAGAAGACGAACTTAAAGTAGAAAAAAGAAAACTTCAGAGAGAGgcCCGAGAATCACAAAGCAGGGTGGAAGAATTAGAAACAGCGAATACACATCTCCAAAGGAGGCTTGATAAACTAAAAAATGCGAAATCTGCGTTACTTAAAGAACTCTGA
- Protein Sequence
- MSQQEMGGVTSDQCKTKNSEVQTVQLEGVTENETNDFEEQNLNDSGHQETDSSEESEGLDPERFTKRRRTLSRVDTVEDTEEADNECINNFLDKCTDQAEARLAARRQARAEAREIRMRELERQQREQEENADRAYDMLAEPVTRSGRASSTTPHRIAATGLTNSSYLSSRRSSEDSLEDGGSLRDVRHELKELEDKFRKAMIANAQLDNDKAAQTYQLELLKDRIEELEEEYSQLKREHRETCREHDQLKRVSVRLKEELAAFKTDLEERDRLIAEKGLVIVGEVISEDEKGADNNTPKTPKKALVSMENAEMLENAGEGSLDVRLKRFAEEKRDLMDQLSHLRLELEEERSRRKRRTSSMNNASLQNGPCLEADGIDVIDVQREANKQLADYKFRLQKSEQDIATLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREARESQSRVEELETANTHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01225682;
- 90% Identity
- -
- 80% Identity
- -