Basic Information

Insect: Dorcus parallelipipedus
Gene Symbol: -
Assembly: GCA_958336345.1
Location: OY284475.1:4106099-4124120[-]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.055 69 5.1 0.2 18 52 181 215 172 216 0.88

2 20 0.028 35 6.0 0.0 20 45 239 264 229 267 0.89

3 20 1.5 1.8e+03 0.5 0.1 23 47 270 294 266 299 0.81

4 20 0.4 5.1e+02 2.3 0.1 21 52 389 420 380 421 0.85

5 20 0.16 2e+02 3.6 0.0 6 46 430 470 427 476 0.86

6 20 1.8 2.3e+03 0.2 0.0 22 47 474 499 471 504 0.81

7 20 0.0097 12 7.5 0.1 21 52 501 532 483 534 0.90

8 20 1.4 1.7e+03 0.7 0.1 21 52 649 680 645 681 0.79

9 20 0.057 71 5.1 0.0 21 45 705 729 702 736 0.91

10 20 2.7 3.5e+03 -0.3 0.0 22 44 734 756 729 761 0.85

11 20 0.0058 7.2 8.2 0.2 21 53 761 793 758 794 0.90

12 20 1.2 1.5e+03 0.8 0.4 35 49 845 859 820 864 0.71

13 20 0.0093 12 7.6 0.4 14 53 860 899 851 900 0.79

14 20 0.0081 10 7.8 0.5 18 51 925 958 917 961 0.87

15 20 0.58 7.3e+02 1.8 0.0 22 44 964 986 958 990 0.87

16 20 0.055 69 5.1 0.1 17 46 986 1015 982 1022 0.84

17 20 4.8 6e+03 -1.1 0.1 22 51 1084 1112 1073 1115 0.75

18 20 0.0012 1.5 10.5 0.0 18 47 1171 1200 1168 1205 0.89

19 20 0.88 1.1e+03 1.3 0.0 17 44 1226 1253 1218 1260 0.84

20 20 0.19 2.4e+02 3.4 0.1 21 48 1286 1313 1278 1316 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.055	69	5.1	0.2	18	52	181	215	172	216	0.88
2	20	0.028	35	6.0	0.0	20	45	239	264	229	267	0.89
3	20	1.5	1.8e+03	0.5	0.1	23	47	270	294	266	299	0.81
4	20	0.4	5.1e+02	2.3	0.1	21	52	389	420	380	421	0.85
5	20	0.16	2e+02	3.6	0.0	6	46	430	470	427	476	0.86
6	20	1.8	2.3e+03	0.2	0.0	22	47	474	499	471	504	0.81
7	20	0.0097	12	7.5	0.1	21	52	501	532	483	534	0.90
8	20	1.4	1.7e+03	0.7	0.1	21	52	649	680	645	681	0.79
9	20	0.057	71	5.1	0.0	21	45	705	729	702	736	0.91
10	20	2.7	3.5e+03	-0.3	0.0	22	44	734	756	729	761	0.85
11	20	0.0058	7.2	8.2	0.2	21	53	761	793	758	794	0.90
12	20	1.2	1.5e+03	0.8	0.4	35	49	845	859	820	864	0.71
13	20	0.0093	12	7.6	0.4	14	53	860	899	851	900	0.79
14	20	0.0081	10	7.8	0.5	18	51	925	958	917	961	0.87
15	20	0.58	7.3e+02	1.8	0.0	22	44	964	986	958	990	0.87
16	20	0.055	69	5.1	0.1	17	46	986	1015	982	1022	0.84
17	20	4.8	6e+03	-1.1	0.1	22	51	1084	1112	1073	1115	0.75
18	20	0.0012	1.5	10.5	0.0	18	47	1171	1200	1168	1205	0.89
19	20	0.88	1.1e+03	1.3	0.0	17	44	1226	1253	1218	1260	0.84
20	20	0.19	2.4e+02	3.4	0.1	21	48	1286	1313	1278	1316	0.92

Sequence Information

Coding Sequence: ATGTCCGTCGACGATAGCAGAGGTGGTCGGCAGTcacgcacttccgtggatggccagccttccGGTCATCGTAGCAAGGTTACGGCGCAGACGCGATGGCGGGGAAAGAATACTCAACGGCGTAAAGCAGCGAGTCCACAAATGATGCGGGACCACGAAAGACAATTAACGCCAAAgtTGACCTCAAAAAGTACTGGCCCCGAAAGTACACGTCCTGAAGTTTCGAGAGCCTCTCCCATCAAGGACAAGCAAACGAAGCTGTTCAATTGTCAACACTGCGACTACAAATCAAACCGTTCCTATTCTGTGAAGAGACATGTTCTGACGCACTTCAAGGGAGATCTATTCGTATGCGAGTTGAAACCTTTAAAGACGCACACGAAGGAAGTTCAAAAACAACTGGTGTGTCAGATTTGCGGTTATAAAACGGATAAATTTTCGTATCTCAAGAGGCACGTCGAGAGACATCAGAAATCGTATCAGTGCGATCGCTGCGGCAACACGTTCAACGCACCTGAAAGCTTGCAATCGCACATGAGGCGACACACCGGGGAAAAACCGTACAAGTGcaacctttgcgattataaatgtacCCAATCCAGCCACCTCTCGACTCATATGAAGCTGCACAGCGGCGAGAAGCCTTTTCAGTGTGACAAATGCGATTACAGAGCTGCCCTGAAGGGTAACCTCACGAAACATATGGTTAAGCATTTCGCAGAGAGGCCGTTCGAGTGTAACCTCTGcgattttaaaacgaaaaccTCCAAGAGTTTGAAGAGACATTTGAAGGCGCACACGGGCGAGAGGGCGTTGGAATGTAGCGTTTGCACTAAACGATTCGTGAATTCGAAGGACATAAAGAGGCATATGTTGATACATACGGGGGAAAAACCGTTGCCCAACGTCAAAGCTATTTCAATCCCCTCATCCTCATCATTTTCTTCCGTCGAAAACGAGttgaaaacttcaaataaacacACTGGGAAGCTTACGACGGAAGTTAAAAAGCAATTCGTATGTGAGACTTGCGATTTTAAAGCGGACAAACTTTGGCATCTCAAGAGGCACTTCAAAAGTCACGAGAAACCGTATCAGTGTGATCGCTGCGGCAATACGTTCACCGCACTTGCCCATCTGAAGTCCCATATGAGGCTACATACCGGGGAAAAACCGTACAAGTGCAAGCTTTGCGATTATCAATCTATTCAATCCTCTCACCTCTGGACACACATGAGGCTGCACTCCGGCGCGAGGCCTTTCCAGTGTGACAAGTGCGATTACAGAGCCGCTCTGAAAAGTGGCCTCACGAAACATATGGTCAGACATTCCGCGGAAAAGCACTTCAAGTGTAAGCTTTGCGATTTTGAAACGAAAACCTCGGGGGATTTAAACAGACATTTAAAGGTGCACACGGGCGAGAAGGCTTTAGAATGTGGCGTTTGCGCCAAAAGATTCGGTAATTCGAAGGACATAAAAAGGCATATGTTGATACATACGGGAGAGAAACCGTTCGCATGCAGTTTGTGCGATTATAGATCAACTCAGGGGGCGAATCTAAAATCACATATGAAACACAGACACAAACAGTTCCCCAAAGTCGAAGCCATTTCAATCCCCTCATCATTTTCTTCCGTCgaaaaaatgcaaattataaaaacagaTCCTGATCCACTCTTACGCGAGTTGAAAACTTCAAACACTGAAATACTGGGAATTACAAAAGCAGATCCTGATCCACTCGTACGCGAGTTGAAACCTTCAAGCAAACTCACGGCGGCAGTTAAAAAGCAACTCGTATGTGAGACCTGCGATTTTAAAACGGACAAACCTTGGCATCTCAAGAGGCACCTCAGCAGTCACATGAAACCGTACCAGTGTGATCGCTGTGGCAACACGTTCACCGCACTTGCCCATTTGAACTCGCATATGAGGCTACACACCGGGGAAAAACCGTATAAGTGCAAGCTTTGCGATTATGAATCTATACAATCCTCTCACCTCTGGACACATATGAGGCACCACTCCGGCGCGAAGCCGTTTCAGTGTGACAAGTGCGATTACAGAGCTGCTCTGAAAAGTAATCTCACGAAACATATGGTCATACATTTCGCAGAGAAGCCGTTCGAGTGCAACTTCTGCGATTTCAAAACGAAAACCTCCAAGAGCTTGAAGAGGCATTTGAAAGCACACACGGGCGAGAAGGCGTTAGAATGTGGCGTTTGCGCGAAAAGATTCGGTAATTCGAAGGACATAAAAAGGCACATGTTAATACATACGGGAGAGAAACCGTTCGCATGCAGTTTGTGCGATTATAGATCAACTCAGGCGGCAAATCTAAAATCGCATATGAAACACAGACACAAACAGTTACCTAACGTCGAAGGTATTTCTATCCCTTCCGTAGAGAAAATACGAATTAGAAATGCACATGGCAGTTACGAAACGAATCGTGCCCATACTCCGAAGAAACACGTTTTCAGGCATACCGGCGAAAAGTCGTACGAATGTAAATCGTGCGACTACAGGAGCGCTATGCCTGGAAATCTCAGGAAGCACGTGAGGGCACGTCACGCTAAGGCAAAAGGCAAAGAAGCAACCGAATCTGAATTGACATGCGAGATTTGCGATTTTAAAACGACGCAAGCCGATTACTTGAGGAAGCACATGAAGAGACACGGCGATCAGAAACCGGGCCAGAGCTTGAAGTTCAATTGTCAGTACTGTGATTATAAGACGAATCGGGCCTACACTCTCAAGAAGCACGTTTTTAGGCACACCGGCGAAAAACCGTACGCGTGTAAATTGTGCGAGTACAGGTGCACCATGTCCGGAAGCCTCAACCGGCACGTTAGGGTACGTCATGCGAACGAAAAGGGCACAGGAGCCGAATCTGGGTTCAcgtgtgagatttgtgatttCAAGACTACGCAAGTTGATTATTTGAAGAGGCACATGAGAAAACACGGCGATCAGCAATTTGCTTGTAAATTGTGCGATTACAGGGGAACCGAGTCCAGAAACTTCAAGAGGCACATGATAATGCACGAGGTGAAGGAAAAAGGCGAAGGATATGAATATAAATTCACGTGCAAGATTTGCGGTTTTAAAACCATTCTAGCCAGTTACCTGAACAAGCACATGAAGCGACACAAACCATCTAATGGTGTGTGGCACAAATGTGACTACTGCGATTATAAGTCGAATCTCCCCTCCACCCTCAGGAAACATATGTATACCCATAGCGGTGAGAAGTCGTTCGCATGTAAATCGTGCAGTTACAGATCCAGCACGTCCGGAAGCCTCCGAAGGCACTCGAAGACGCACATGGCGAAAGAAAAGGTCCAGGATGCTGACAAGAAATTCATGTGTGATGTCTGCAGTTTCAAAACCACGACTGCCAGATATCTGGCGAAACACATGTTGATACACAGCGTTGAGAAGTCGTTCCAATGCGATCGCTGCGGCGACAAATTCTCGTCGAATACCATCTTGAAAATGCACATAATGCGACATACCGGGGAGAAACCGTACGAGTGCAACATTTGCGGTTATAAATGCACCCAAAGCGGCTCGCTGAAACGTCACCTTGTGCTGCACACCGGCGTGAAAACTTTTCAGTGCAACAAATGCGATTATAAGGCGGCCATAAAAGGTACCCTCACGAAGCACATGGCCAAACATTCCACGGAGAAGCCGTTCGAGTGCAACCTTTGTAAATACAAAACGAAAACCTCTAATCACTTGAAAAGCCACATGCTATCGCACACTGGCGAGCAGTTGTATAAATGTAACATTTGTGATAAAGGATTCTCTCGTAACAAGGATATGAAAAAACATACGTTGATACACACAGGAGAGAAACCGTTCGCGTGTAATTTATGCGATTACAGATCCACGCAGAAGTCGAACGTGAAGATACATATGAAGCACAGACATAAggaatgtttttttaatgaatttagtCCAAGTAAAATTGAAGCAACGCAAGACGATTGA
Protein Sequence: MSVDDSRGGRQSRTSVDGQPSGHRSKVTAQTRWRGKNTQRRKAASPQMMRDHERQLTPKLTSKSTGPESTRPEVSRASPIKDKQTKLFNCQHCDYKSNRSYSVKRHVLTHFKGDLFVCELKPLKTHTKEVQKQLVCQICGYKTDKFSYLKRHVERHQKSYQCDRCGNTFNAPESLQSHMRRHTGEKPYKCNLCDYKCTQSSHLSTHMKLHSGEKPFQCDKCDYRAALKGNLTKHMVKHFAERPFECNLCDFKTKTSKSLKRHLKAHTGERALECSVCTKRFVNSKDIKRHMLIHTGEKPLPNVKAISIPSSSSFSSVENELKTSNKHTGKLTTEVKKQFVCETCDFKADKLWHLKRHFKSHEKPYQCDRCGNTFTALAHLKSHMRLHTGEKPYKCKLCDYQSIQSSHLWTHMRLHSGARPFQCDKCDYRAALKSGLTKHMVRHSAEKHFKCKLCDFETKTSGDLNRHLKVHTGEKALECGVCAKRFGNSKDIKRHMLIHTGEKPFACSLCDYRSTQGANLKSHMKHRHKQFPKVEAISIPSSFSSVEKMQIIKTDPDPLLRELKTSNTEILGITKADPDPLVRELKPSSKLTAAVKKQLVCETCDFKTDKPWHLKRHLSSHMKPYQCDRCGNTFTALAHLNSHMRLHTGEKPYKCKLCDYESIQSSHLWTHMRHHSGAKPFQCDKCDYRAALKSNLTKHMVIHFAEKPFECNFCDFKTKTSKSLKRHLKAHTGEKALECGVCAKRFGNSKDIKRHMLIHTGEKPFACSLCDYRSTQAANLKSHMKHRHKQLPNVEGISIPSVEKIRIRNAHGSYETNRAHTPKKHVFRHTGEKSYECKSCDYRSAMPGNLRKHVRARHAKAKGKEATESELTCEICDFKTTQADYLRKHMKRHGDQKPGQSLKFNCQYCDYKTNRAYTLKKHVFRHTGEKPYACKLCEYRCTMSGSLNRHVRVRHANEKGTGAESGFTCEICDFKTTQVDYLKRHMRKHGDQQFACKLCDYRGTESRNFKRHMIMHEVKEKGEGYEYKFTCKICGFKTILASYLNKHMKRHKPSNGVWHKCDYCDYKSNLPSTLRKHMYTHSGEKSFACKSCSYRSSTSGSLRRHSKTHMAKEKVQDADKKFMCDVCSFKTTTARYLAKHMLIHSVEKSFQCDRCGDKFSSNTILKMHIMRHTGEKPYECNICGYKCTQSGSLKRHLVLHTGVKTFQCNKCDYKAAIKGTLTKHMAKHSTEKPFECNLCKYKTKTSNHLKSHMLSHTGEQLYKCNICDKGFSRNKDMKKHTLIHTGEKPFACNLCDYRSTQKSNVKIHMKHRHKECFFNEFSPSKIEATQDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00465606;
90% Identity: iTF_00465606;
80% Identity: iTF_00466583;