Dpar000676.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dorcus parallelipipedus
Gene Symbol
-
Assembly
GCA_958336345.1
Location
OY284475.1:4106099-4124120[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 37 0.011 1 11.4 4.2 1 23 88 110 88 110 0.98
2 37 0.0038 0.35 12.8 0.7 2 23 135 156 134 156 0.96
3 37 2.1e-05 0.0019 20.0 0.5 1 23 160 182 160 182 0.99
4 37 0.00023 0.021 16.7 6.9 1 23 188 210 188 210 0.98
5 37 0.00088 0.081 14.8 0.5 1 23 216 238 216 238 0.98
6 37 0.00051 0.047 15.6 2.5 1 23 244 266 244 266 0.97
7 37 8.4e-05 0.0078 18.0 0.6 2 23 273 294 272 294 0.96
8 37 0.2 18 7.4 2.8 1 23 339 361 339 361 0.98
9 37 6.7e-05 0.0062 18.3 1.6 1 23 365 387 365 387 0.99
10 37 0.0001 0.0095 17.8 2.6 1 23 393 415 393 415 0.99
11 37 0.0018 0.16 13.9 0.5 1 23 421 443 421 443 0.98
12 37 0.0001 0.0095 17.8 1.2 1 23 449 471 449 471 0.99
13 37 0.0019 0.18 13.8 0.2 2 23 478 499 477 499 0.96
14 37 0.0097 0.9 11.5 2.1 1 23 505 528 505 528 0.95
15 37 0.012 1.1 11.2 1.5 2 23 600 621 599 621 0.96
16 37 7.3e-05 0.0068 18.2 1.3 1 23 625 647 625 647 0.99
17 37 0.00035 0.033 16.1 4.5 1 23 653 675 653 675 0.99
18 37 0.0003 0.027 16.3 0.4 1 23 681 703 681 703 0.97
19 37 0.0011 0.097 14.6 3.3 1 23 709 731 709 731 0.97
20 37 0.0019 0.18 13.8 0.2 2 23 738 759 737 759 0.96
21 37 0.00086 0.079 14.9 2.0 1 23 765 788 765 788 0.95
22 37 0.0029 0.27 13.2 0.3 1 23 835 858 835 858 0.96
23 37 6e-05 0.0056 18.5 1.2 2 23 872 893 871 893 0.97
24 37 0.0038 0.35 12.8 3.3 1 23 904 926 904 926 0.96
25 37 0.003 0.27 13.2 1.9 1 23 932 955 932 955 0.97
26 37 4.2e-05 0.0038 19.0 2.0 1 23 967 989 967 989 0.99
27 37 0.002 0.18 13.7 1.1 1 23 994 1016 994 1016 0.97
28 37 0.00016 0.015 17.1 1.5 1 23 1029 1051 1029 1051 0.98
29 37 0.0011 0.097 14.6 3.6 1 23 1059 1081 1059 1081 0.98
30 37 0.0087 0.8 11.7 2.3 1 23 1087 1109 1087 1109 0.97
31 37 0.0022 0.2 13.6 0.6 1 23 1122 1144 1122 1144 0.98
32 37 0.027 2.5 10.2 0.9 1 23 1150 1172 1150 1172 0.98
33 37 3.6e-05 0.0033 19.2 1.6 1 23 1178 1200 1178 1200 0.96
34 37 0.0027 0.25 13.3 0.6 1 23 1206 1228 1206 1228 0.98
35 37 0.0012 0.11 14.4 4.8 1 23 1234 1256 1234 1256 0.98
36 37 3e-06 0.00027 22.6 1.6 1 23 1262 1284 1262 1284 0.98
37 37 0.0023 0.21 13.5 3.1 1 23 1290 1313 1290 1313 0.96

Sequence Information

Coding Sequence
ATGTCCGTCGACGATAGCAGAGGTGGTCGGCAGTcacgcacttccgtggatggccagccttccGGTCATCGTAGCAAGGTTACGGCGCAGACGCGATGGCGGGGAAAGAATACTCAACGGCGTAAAGCAGCGAGTCCACAAATGATGCGGGACCACGAAAGACAATTAACGCCAAAgtTGACCTCAAAAAGTACTGGCCCCGAAAGTACACGTCCTGAAGTTTCGAGAGCCTCTCCCATCAAGGACAAGCAAACGAAGCTGTTCAATTGTCAACACTGCGACTACAAATCAAACCGTTCCTATTCTGTGAAGAGACATGTTCTGACGCACTTCAAGGGAGATCTATTCGTATGCGAGTTGAAACCTTTAAAGACGCACACGAAGGAAGTTCAAAAACAACTGGTGTGTCAGATTTGCGGTTATAAAACGGATAAATTTTCGTATCTCAAGAGGCACGTCGAGAGACATCAGAAATCGTATCAGTGCGATCGCTGCGGCAACACGTTCAACGCACCTGAAAGCTTGCAATCGCACATGAGGCGACACACCGGGGAAAAACCGTACAAGTGcaacctttgcgattataaatgtacCCAATCCAGCCACCTCTCGACTCATATGAAGCTGCACAGCGGCGAGAAGCCTTTTCAGTGTGACAAATGCGATTACAGAGCTGCCCTGAAGGGTAACCTCACGAAACATATGGTTAAGCATTTCGCAGAGAGGCCGTTCGAGTGTAACCTCTGcgattttaaaacgaaaaccTCCAAGAGTTTGAAGAGACATTTGAAGGCGCACACGGGCGAGAGGGCGTTGGAATGTAGCGTTTGCACTAAACGATTCGTGAATTCGAAGGACATAAAGAGGCATATGTTGATACATACGGGGGAAAAACCGTTGCCCAACGTCAAAGCTATTTCAATCCCCTCATCCTCATCATTTTCTTCCGTCGAAAACGAGttgaaaacttcaaataaacacACTGGGAAGCTTACGACGGAAGTTAAAAAGCAATTCGTATGTGAGACTTGCGATTTTAAAGCGGACAAACTTTGGCATCTCAAGAGGCACTTCAAAAGTCACGAGAAACCGTATCAGTGTGATCGCTGCGGCAATACGTTCACCGCACTTGCCCATCTGAAGTCCCATATGAGGCTACATACCGGGGAAAAACCGTACAAGTGCAAGCTTTGCGATTATCAATCTATTCAATCCTCTCACCTCTGGACACACATGAGGCTGCACTCCGGCGCGAGGCCTTTCCAGTGTGACAAGTGCGATTACAGAGCCGCTCTGAAAAGTGGCCTCACGAAACATATGGTCAGACATTCCGCGGAAAAGCACTTCAAGTGTAAGCTTTGCGATTTTGAAACGAAAACCTCGGGGGATTTAAACAGACATTTAAAGGTGCACACGGGCGAGAAGGCTTTAGAATGTGGCGTTTGCGCCAAAAGATTCGGTAATTCGAAGGACATAAAAAGGCATATGTTGATACATACGGGAGAGAAACCGTTCGCATGCAGTTTGTGCGATTATAGATCAACTCAGGGGGCGAATCTAAAATCACATATGAAACACAGACACAAACAGTTCCCCAAAGTCGAAGCCATTTCAATCCCCTCATCATTTTCTTCCGTCgaaaaaatgcaaattataaaaacagaTCCTGATCCACTCTTACGCGAGTTGAAAACTTCAAACACTGAAATACTGGGAATTACAAAAGCAGATCCTGATCCACTCGTACGCGAGTTGAAACCTTCAAGCAAACTCACGGCGGCAGTTAAAAAGCAACTCGTATGTGAGACCTGCGATTTTAAAACGGACAAACCTTGGCATCTCAAGAGGCACCTCAGCAGTCACATGAAACCGTACCAGTGTGATCGCTGTGGCAACACGTTCACCGCACTTGCCCATTTGAACTCGCATATGAGGCTACACACCGGGGAAAAACCGTATAAGTGCAAGCTTTGCGATTATGAATCTATACAATCCTCTCACCTCTGGACACATATGAGGCACCACTCCGGCGCGAAGCCGTTTCAGTGTGACAAGTGCGATTACAGAGCTGCTCTGAAAAGTAATCTCACGAAACATATGGTCATACATTTCGCAGAGAAGCCGTTCGAGTGCAACTTCTGCGATTTCAAAACGAAAACCTCCAAGAGCTTGAAGAGGCATTTGAAAGCACACACGGGCGAGAAGGCGTTAGAATGTGGCGTTTGCGCGAAAAGATTCGGTAATTCGAAGGACATAAAAAGGCACATGTTAATACATACGGGAGAGAAACCGTTCGCATGCAGTTTGTGCGATTATAGATCAACTCAGGCGGCAAATCTAAAATCGCATATGAAACACAGACACAAACAGTTACCTAACGTCGAAGGTATTTCTATCCCTTCCGTAGAGAAAATACGAATTAGAAATGCACATGGCAGTTACGAAACGAATCGTGCCCATACTCCGAAGAAACACGTTTTCAGGCATACCGGCGAAAAGTCGTACGAATGTAAATCGTGCGACTACAGGAGCGCTATGCCTGGAAATCTCAGGAAGCACGTGAGGGCACGTCACGCTAAGGCAAAAGGCAAAGAAGCAACCGAATCTGAATTGACATGCGAGATTTGCGATTTTAAAACGACGCAAGCCGATTACTTGAGGAAGCACATGAAGAGACACGGCGATCAGAAACCGGGCCAGAGCTTGAAGTTCAATTGTCAGTACTGTGATTATAAGACGAATCGGGCCTACACTCTCAAGAAGCACGTTTTTAGGCACACCGGCGAAAAACCGTACGCGTGTAAATTGTGCGAGTACAGGTGCACCATGTCCGGAAGCCTCAACCGGCACGTTAGGGTACGTCATGCGAACGAAAAGGGCACAGGAGCCGAATCTGGGTTCAcgtgtgagatttgtgatttCAAGACTACGCAAGTTGATTATTTGAAGAGGCACATGAGAAAACACGGCGATCAGCAATTTGCTTGTAAATTGTGCGATTACAGGGGAACCGAGTCCAGAAACTTCAAGAGGCACATGATAATGCACGAGGTGAAGGAAAAAGGCGAAGGATATGAATATAAATTCACGTGCAAGATTTGCGGTTTTAAAACCATTCTAGCCAGTTACCTGAACAAGCACATGAAGCGACACAAACCATCTAATGGTGTGTGGCACAAATGTGACTACTGCGATTATAAGTCGAATCTCCCCTCCACCCTCAGGAAACATATGTATACCCATAGCGGTGAGAAGTCGTTCGCATGTAAATCGTGCAGTTACAGATCCAGCACGTCCGGAAGCCTCCGAAGGCACTCGAAGACGCACATGGCGAAAGAAAAGGTCCAGGATGCTGACAAGAAATTCATGTGTGATGTCTGCAGTTTCAAAACCACGACTGCCAGATATCTGGCGAAACACATGTTGATACACAGCGTTGAGAAGTCGTTCCAATGCGATCGCTGCGGCGACAAATTCTCGTCGAATACCATCTTGAAAATGCACATAATGCGACATACCGGGGAGAAACCGTACGAGTGCAACATTTGCGGTTATAAATGCACCCAAAGCGGCTCGCTGAAACGTCACCTTGTGCTGCACACCGGCGTGAAAACTTTTCAGTGCAACAAATGCGATTATAAGGCGGCCATAAAAGGTACCCTCACGAAGCACATGGCCAAACATTCCACGGAGAAGCCGTTCGAGTGCAACCTTTGTAAATACAAAACGAAAACCTCTAATCACTTGAAAAGCCACATGCTATCGCACACTGGCGAGCAGTTGTATAAATGTAACATTTGTGATAAAGGATTCTCTCGTAACAAGGATATGAAAAAACATACGTTGATACACACAGGAGAGAAACCGTTCGCGTGTAATTTATGCGATTACAGATCCACGCAGAAGTCGAACGTGAAGATACATATGAAGCACAGACATAAggaatgtttttttaatgaatttagtCCAAGTAAAATTGAAGCAACGCAAGACGATTGA
Protein Sequence
MSVDDSRGGRQSRTSVDGQPSGHRSKVTAQTRWRGKNTQRRKAASPQMMRDHERQLTPKLTSKSTGPESTRPEVSRASPIKDKQTKLFNCQHCDYKSNRSYSVKRHVLTHFKGDLFVCELKPLKTHTKEVQKQLVCQICGYKTDKFSYLKRHVERHQKSYQCDRCGNTFNAPESLQSHMRRHTGEKPYKCNLCDYKCTQSSHLSTHMKLHSGEKPFQCDKCDYRAALKGNLTKHMVKHFAERPFECNLCDFKTKTSKSLKRHLKAHTGERALECSVCTKRFVNSKDIKRHMLIHTGEKPLPNVKAISIPSSSSFSSVENELKTSNKHTGKLTTEVKKQFVCETCDFKADKLWHLKRHFKSHEKPYQCDRCGNTFTALAHLKSHMRLHTGEKPYKCKLCDYQSIQSSHLWTHMRLHSGARPFQCDKCDYRAALKSGLTKHMVRHSAEKHFKCKLCDFETKTSGDLNRHLKVHTGEKALECGVCAKRFGNSKDIKRHMLIHTGEKPFACSLCDYRSTQGANLKSHMKHRHKQFPKVEAISIPSSFSSVEKMQIIKTDPDPLLRELKTSNTEILGITKADPDPLVRELKPSSKLTAAVKKQLVCETCDFKTDKPWHLKRHLSSHMKPYQCDRCGNTFTALAHLNSHMRLHTGEKPYKCKLCDYESIQSSHLWTHMRHHSGAKPFQCDKCDYRAALKSNLTKHMVIHFAEKPFECNFCDFKTKTSKSLKRHLKAHTGEKALECGVCAKRFGNSKDIKRHMLIHTGEKPFACSLCDYRSTQAANLKSHMKHRHKQLPNVEGISIPSVEKIRIRNAHGSYETNRAHTPKKHVFRHTGEKSYECKSCDYRSAMPGNLRKHVRARHAKAKGKEATESELTCEICDFKTTQADYLRKHMKRHGDQKPGQSLKFNCQYCDYKTNRAYTLKKHVFRHTGEKPYACKLCEYRCTMSGSLNRHVRVRHANEKGTGAESGFTCEICDFKTTQVDYLKRHMRKHGDQQFACKLCDYRGTESRNFKRHMIMHEVKEKGEGYEYKFTCKICGFKTILASYLNKHMKRHKPSNGVWHKCDYCDYKSNLPSTLRKHMYTHSGEKSFACKSCSYRSSTSGSLRRHSKTHMAKEKVQDADKKFMCDVCSFKTTTARYLAKHMLIHSVEKSFQCDRCGDKFSSNTILKMHIMRHTGEKPYECNICGYKCTQSGSLKRHLVLHTGVKTFQCNKCDYKAAIKGTLTKHMAKHSTEKPFECNLCKYKTKTSNHLKSHMLSHTGEQLYKCNICDKGFSRNKDMKKHTLIHTGEKPFACNLCDYRSTQKSNVKIHMKHRHKECFFNEFSPSKIEATQDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00465606;
90% Identity
iTF_00465606;
80% Identity
iTF_00467099;