Dvas033910.1
Basic Information
- Insect
- Dolichoris vasculosae
- Gene Symbol
- bab1
- Assembly
- GCA_018907195.1
- Location
- JACCHY010000002.1:25030874-25035088[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-18 2.5e-14 54.1 0.0 1 43 28 71 28 73 0.95 2 2 0.27 2.2e+03 -0.1 0.3 6 15 152 161 147 164 0.86
Sequence Information
- Coding Sequence
- ATGTGGCAAAAGTGCTGGAACACCAATCAGAGTCTAGTGCACAATCTTCGCTTTCGAGAACGCGGCCCTTTGAAGTCCTGGCGGCCGGAAACGATGGCGGAAGCGATTTTTAGCGTACTGAAAGAAGGTCTCTCGTTGAGCCAGGCCGCAAGGAAATACGATATCCCGTACCCGACGTTCGTACTTTACGCGAACCGAGTCCATAACATGCTCGGACCGAGCGCCGACGGTGGAGCTGGTAAGTATCTGCGACCCAAGGGCCGGGGGAGGCCGCAGAGGATTCTGCTCGGTGTCTGGCCAGACGAGCACATCCGCGGTGTGATCAGAGCGGTGGTCTTCCGCGACGGCCACTCGCCCCACATCGTCAAGGAGGAACCGACCACCATGTACCCCGCCCTGGCGAATTACGGAGCCTGTAACGGACCCGAGGGAGCGGTCAGCCCGAGCGCAGCTGCCGCCGCGGTCGCCGCCGTCGCCCAAGGTCTCCGACACCAGATGTGCAGCATGGTGGCCGCGGCCCACTCGCAACAGCACGACATGCTGGCGACGAACCTCTCGACGAGCCTCTCCGTCGGGGGCGGTAACAGCAACCACGGAAACTCGCCTCTCAACCTCGGGCTCGCGAGCCCCGGATCGGGCGGTCCACCCGAGAGTCCGATGGAGTCGCCCCTGGCCAGTCCTCTCGGTTCCCTCATGGACCCCTCGCACCTGCCTCCGAGCGTCGAGGTCGGTATCGGCGTCAGCGGCATGACCTACAAGCCCGCGCGCAGCTTCGTCAGTCCCCGGCCCGAGACTCTCTTCCAGGAGGACATCTCCGACCTCGTCAAGAGCTCGCACGCGGCTCTCAAGGAAAAGGAGAAGATCGCCGTCAAACTGGAGCCCCTCGCGGACTCGCGATGCGAATAG
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGAGKYLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHSPHIVKEEPTTMYPALANYGACNGPEGAVSPSAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMLATNLSTSLSVGGGNSNHGNSPLNLGLASPGSGGPPESPMESPLASPLGSLMDPSHLPPSVEVGIGVSGMTYKPARSFVSPRPETLFQEDISDLVKSSHAALKEKEKIAVKLEPLADSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00287108; iTF_00968714; iTF_01523951; iTF_00143794; iTF_01379923; iTF_00304987;
- 90% Identity
- iTF_00968714; iTF_01379923; iTF_00304987;
- 80% Identity
- -