Dlor020656.2
Basic Information
- Insect
- Dircenna loreta
- Gene Symbol
- -
- Assembly
- GCA_963555665.1
- Location
- OY743100.1:3354761-3362071[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 9.5 8.2e+02 1.5 2.0 1 23 54 77 54 77 0.94 2 20 0.0038 0.33 12.1 3.3 1 23 84 107 84 107 0.97 3 20 6.3 5.5e+02 2.0 4.3 1 23 185 207 185 207 0.96 4 20 0.0017 0.15 13.2 1.0 2 23 213 234 212 234 0.97 5 20 2.4 2.1e+02 3.3 1.5 1 23 240 262 240 263 0.94 6 20 0.21 18 6.7 3.4 2 22 495 515 494 515 0.95 7 20 0.21 18 6.6 0.6 2 23 767 788 766 788 0.96 8 20 0.012 1 10.6 0.8 2 23 875 896 874 896 0.96 9 20 0.22 19 6.6 1.4 1 23 904 926 904 926 0.95 10 20 0.071 6.1 8.1 3.1 1 23 963 985 963 985 0.95 11 20 0.00049 0.042 14.9 5.4 1 23 993 1015 993 1015 0.99 12 20 0.056 4.9 8.5 4.1 1 23 1098 1120 1098 1120 0.99 13 20 3.2 2.8e+02 2.9 3.2 1 19 1177 1195 1177 1199 0.92 14 20 1.4 1.2e+02 4.1 0.9 1 19 1205 1223 1205 1227 0.95 15 20 0.0063 0.54 11.5 0.7 1 23 1297 1319 1297 1319 0.95 16 20 0.013 1.1 10.5 1.9 1 23 1325 1347 1325 1347 0.95 17 20 0.0067 0.58 11.4 2.6 1 23 1437 1459 1437 1459 0.97 18 20 0.00017 0.015 16.4 1.4 1 23 1465 1487 1465 1487 0.99 19 20 0.3 26 6.2 2.0 1 23 1579 1601 1579 1601 0.97 20 20 0.0011 0.094 13.8 3.3 1 23 1612 1634 1612 1634 0.98
Sequence Information
- Coding Sequence
- ATGCTACAACAGATGTCCTCGCCGCAGAGCGCGCAACTCGGCGAGGTCGCGACTCTCGTGCGCCCCCTCGAAGGCCGCGTGTGCGGCGACGCATCATCTGAGGCCTCCTCTGATGCAGCGGAAGATTTTGAATTGCCGCAATGCAAAATAAAGCGTAACTATAATTGCACAAAGTGTACGTTCTATACACAAAACCCACGCTATTATCTGTTACACACGCGTGACGTTCACTTTGAAAGACTTAAGATTTATGACTGCCCTCATTGTCTTTACGCTTCCCGGCATCAGCAGAAGCTGACGAGACACATAAAAATGGTTCATGAAGCGACGGCCACTACCAAGGCAGCCGAACCTACTCTACCTTCTACTTCTGAGAATACAAATCACATAGAACGAATAGAAGAATTACTCGAAGAAGTCGAAGAATGTGATGATGATCAAATGGATATTGACGACTGTAATGAAGAGGCACTTGAGCGTAACTTTGAAGCTGAATCTTTGATTCAAGGAGACTCGGTGGCTTCGGACCAGCcagttgataaaaataaattcttctcGTGTAATAAATGCAACTATGTGACACACATAAGAGCGCGGTATACCAAACATGTCAAGTACCATTCGATGCCTATGATAAAGTGTACTATGTGTGACTTTCGGACACCATACAAATGGAACCTGGACCGCCACATGAAAAATCACGGCGGCAATGGGAGCTTTTACTGCTCGATGTGTAATTTTACTGCGGATATTAGACAAAGTTTGACAGTTCACGAGATGAATCACCACACGCCCCCCGTTGGTCAGCTGAGCTCCAGTCGTCGGCGCAACCGGGTGGGCGCTAGCGACATGTCCGCCGAAGTGACGGATGGTAGCGCTCTCATTTCGAGAGAGGAGGAAGGGAGCGGAGACTCGCGGTCCTCACACTCCACATCGGAATCGGGCCTTCGATACATGGACAGAGATATCGGCTGCTGCAATAGCGACTCCAATGAAGCTTTAACTTCTGACGCAACGAAGAAAGATAATATGCACCTTAGGAAGGAATTGGAGAATCAGGCTAACGTATCTTCAGACGAAGgcaaaaatcaaaaacaaagtaaaaaggCACATAGACCTTTGCCGCAACTGATTCCTCTTAATGCGTCAACACCAAATCAAAACAAGACCAATTCTGGAGAACCACCAGcgaaaaaatttaaagaatcaGAAAAGTCTGAAGATATACCCATAGATATTACCTTAACACCAGTAAATAACGCTACTTCTAAAGAAACAACCAAAACTAAAAAGAATGAATCCttctttgataaattaaaagaaagattGCTAACGGAGACTGGTGAAGACGGGAGTCTAGTATGTAAAAATTGTGGATTCGAAAGTAAATGCCTATCAGAACATTCAGTACATGAAAAAAATTGCACGGCTCAATCCAGCCGAATATCCACGAATCCTTTACATTCAAGTTTAGGATCAACACGCTGTCAAAATTGCAGACATAGATGCAAGTCAAGTGCAgacttatatatacacatgcagacatgtaaaaaaaaagataacgcTTCAGAAAATACATCGGAAATATTCAATCAAGATAGCAACGAGACTCCATCTACTAATCTGGAAAAAGAGGCAGAACCGCATCCTATGGAAAATGTTGTGTTTGtttggaataatattaatcccAGCaacagtaaatttaataccCCTTTAGATATAAGCATCAATGATGATTCTACGCTTCCAGACCAAGGGAGGCACTTAGATCTTGATATTGCTGATGACAGCGAAACCATGAACTTATCACCCAGCCAAGCGGTTGGCAAAAAAGTGTTCAAGTGTCCTCATTGTTTATTCTGGGCTTCAACAGCTTCCAGGTTCCACGTGCATATAGTCGgtcatcttaataaaaaaccatTTGAATGttcattatgtaaatataagtcCAATTGGAGATGGGATATTACAAAACATATCAAACTTAAATCAGCACGAGACCCCGACCATGCAGACGCTAAAGTTTTGATGACTGATGAAACCGGCAGAAggaattatacaaaatataataaattcttagCCATgccaattttaaatgaaaatggtGAAAATGAATTCCATTATATTGATCAAAACACCACTATAGATACAACTTTAGATGATGACTCGTATGATGTGAATGAGGGTACGAATAACTCATTCGATATACAACCCCTTAACTTACAAACACAACCCAATGaacttaaatttgaaatagacAGCAGAATGCAAGATAAGAAACCTAAAAAGACGTTAtggaaatgtaaaaaatgtaattacaaAGACTCATCCAAGGAAGCTCTATTGGAACACGTTCGAGAACATTCCAGGCCAGAAGAAGGAACAGAGGACAATAAACTCCAAATAATCTCTAATAAGAAGCCAGACAACACTCCGGATCCCGCTGACTTAGCGTATCGCTGTGGCCACTGTAACCAACTGTCTAACTGGAAACATGTCATACAgAGACACTGCCGTTTGAAGCACGATGggataataaaagtaatcacCACAATAAAACCAAAAGCTGAAGTCAATGCGAACTCTTCAACCACTGCCTCTACAGCCGAATTGATTACTGACACCTGTACCAAATGCCCGTTTAAATCATCAGATAAAAACTCCCTACTGGCACATCTGCAGCAACATCAACCTTCGTCGcagtcaatatttaaatgttatttctgcCCTTTCTTTGTCAAAGACGAACACGAGCTAATACAACATCTTGTCCTGCACGGTATAACGGACCCTgaagaatatatatcaaaagcaATGGGATGCAGATCACCACTACCGGATTCAGGATCCAACGCGTcgcttaatatattatgtgcaAATAAACGACATAAATGCACTGAATGCCCGTATGAAACAAATAGTAAATCTCAATTCATTTATCATGAGCAGTTTCACCGTCTACCAGCTGACACTCCGTATAAATGTCAGGAATGTAACTACAGCGTCTCTAAAAGGCATTTACTTCATCAGCACATGAGAGTGCACGGTATTTTTTCAAGGAAGAATGAAATGGATATAGAATTAGACGTTTCAAATTACACTCAAGATGATGTGAAAGcagactattttataaattttgatgatATTCCATTTGTATGGGTCTCGGCGAAGAATGATTTTCACAAAATGTACAAATGTCGCTATTGTTCATATGTTAATTCTCAAAAGTGCACAATACCCAACcatgaaaaaatacattgtatattatttgaaaacagtgatataactatatataaatgtctcGAGTGTAAATTTACGTGTGATAATAAAAGTAGGCTAGCGGAACATTCAAAAACACATGGAGAAATATACGGTCGCATTTATTGCCAAGTTGAGCCCGATGTGCCCGACGAGGAACAGATAGCCAAGTTACGGAAAGTGATcgataaagataaaatgaatGCGTTAGATGAGTTGCCAAGTGACGATAATGTAATCGATAGTCATAGTAAAGATagtaaaacattgtttttctGTCAAAAATGTCCATCTAGATTTTTTTCAGACAGCGAATTAAAAAGTCATGATAAATTTCATGACTTAACCTTTTTATACAAATGCAAGAGTTGCGAATTTTCAGTGCCTCAAGAAAGTGACATGACCACTCATGACTTTTCGCATACTgatgaatataatacaaaaacgaaaatgcttaaatttattcacaaaatGCATCCCATATATAAAGTACCTAAGTTGCATCCTGTTCATTGTCCCATGACTTCTGAAATGACTTGGGTCGTTGCAAATCCAGGCAACAATTACAACATAAACGTAAATGAGAATAACAACAGGAGATCTACAGAAACAAAACACGTgccaaaacaatatttttgtaaagaatGTCCagcaaagttttttaaaagttcagCTCTGAGTTATCACATGGGGTTACACGGAGGCGATGGCGATCACAAGTGCAAAAAGTGCAGTTACTCTGTTAAGAACATTGGAAATCTTGCCAAACATGAATCTCTTCACGAACATGAAAACAAAGTGTCTACTGTGGATTATGAATCTGGGGAAGATCtggattacaaaaatatacctttGTCCGGGActgatttatttcaaagaaagaCTGAAGCCCAGAAAAGAGTTTTAACTGACAAAGATAAACTGGTTAAACCAAATGACCATTTCCCGCCAGTGCTTCAAGCTGACCCTCAGTTTGGATATTTAATGCATGGTAATCCAGAATTTATATATcctacttatttaaaaaatggaagACAAAAAGAAAAACGATACAAATGCCATAAATGTCCGTCAGCATTTGAAAAGCGTGAACAATACAAGATCCACTTATCCCTTCATGGTTCAAAACAAAGGTATAAATGTGAACTCTGTGATTATTCGGTAAAGTATTATGCTAATTATGTACAACATATGCGAAAACATCAAATGAATGATGAAGCTCAGGCCGAAAGAAAAAAGTGTAATGGCTTTGTGGAATCTGAGCCGGAAAAACGAGAAAACAAGCACGACGATATTggagataatataaaattagcaaTTAAAACAATGCCAAAAAGACCACCTCGAAGCGATTTTCAACAATTTTCAATTAGTGATCAACAAACTCTTCGATTGTTACAACGAAGGCGTTCTATGAATAACTCTAGTAAAGATATTACTGCACCTGAAGTTTCGCCAACAAAAGACCGTAAATTGCACGTATGTCTTATGTGTCCTTATACAAACCAACGGCAAGATGCACTATTTAACCACTACAGAAGACACGATGAAACGGACCTCCTATCTTCTGGTAGTCACAAATGTTCATACTGCGGTTTAGTTGTGGTCCAATCTCATTTTCTGCGTGAGcatttaaaaacacattttacatATCAGAAAAATCTCACTCCTGAGTGTTTCGTTGCCAACGAAAATGTTAGCTTTACAATTACCAATTTAGATGAAAATGATTTGTCAAGTGATCTCAAATTACATTCCATTAATCAAAGTTCCCACTGCGAtgacaacaaaatatttgttaaaataaagacaGGAGAAATATTTGCTgaataa
- Protein Sequence
- MLQQMSSPQSAQLGEVATLVRPLEGRVCGDASSEASSDAAEDFELPQCKIKRNYNCTKCTFYTQNPRYYLLHTRDVHFERLKIYDCPHCLYASRHQQKLTRHIKMVHEATATTKAAEPTLPSTSENTNHIERIEELLEEVEECDDDQMDIDDCNEEALERNFEAESLIQGDSVASDQPVDKNKFFSCNKCNYVTHIRARYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGNGSFYCSMCNFTADIRQSLTVHEMNHHTPPVGQLSSSRRRNRVGASDMSAEVTDGSALISREEEGSGDSRSSHSTSESGLRYMDRDIGCCNSDSNEALTSDATKKDNMHLRKELENQANVSSDEGKNQKQSKKAHRPLPQLIPLNASTPNQNKTNSGEPPAKKFKESEKSEDIPIDITLTPVNNATSKETTKTKKNESFFDKLKERLLTETGEDGSLVCKNCGFESKCLSEHSVHEKNCTAQSSRISTNPLHSSLGSTRCQNCRHRCKSSADLYIHMQTCKKKDNASENTSEIFNQDSNETPSTNLEKEAEPHPMENVVFVWNNINPSNSKFNTPLDISINDDSTLPDQGRHLDLDIADDSETMNLSPSQAVGKKVFKCPHCLFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPDHADAKVLMTDETGRRNYTKYNKFLAMPILNENGENEFHYIDQNTTIDTTLDDDSYDVNEGTNNSFDIQPLNLQTQPNELKFEIDSRMQDKKPKKTLWKCKKCNYKDSSKEALLEHVREHSRPEEGTEDNKLQIISNKKPDNTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTIKPKAEVNANSSTTASTAELITDTCTKCPFKSSDKNSLLAHLQQHQPSSQSIFKCYFCPFFVKDEHELIQHLVLHGITDPEEYISKAMGCRSPLPDSGSNASLNILCANKRHKCTECPYETNSKSQFIYHEQFHRLPADTPYKCQECNYSVSKRHLLHQHMRVHGIFSRKNEMDIELDVSNYTQDDVKADYFINFDDIPFVWVSAKNDFHKMYKCRYCSYVNSQKCTIPNHEKIHCILFENSDITIYKCLECKFTCDNKSRLAEHSKTHGEIYGRIYCQVEPDVPDEEQIAKLRKVIDKDKMNALDELPSDDNVIDSHSKDSKTLFFCQKCPSRFFSDSELKSHDKFHDLTFLYKCKSCEFSVPQESDMTTHDFSHTDEYNTKTKMLKFIHKMHPIYKVPKLHPVHCPMTSEMTWVVANPGNNYNINVNENNNRRSTETKHVPKQYFCKECPAKFFKSSALSYHMGLHGGDGDHKCKKCSYSVKNIGNLAKHESLHEHENKVSTVDYESGEDLDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKCNGFVESEPEKRENKHDDIGDNIKLAIKTMPKRPPRSDFQQFSISDQQTLRLLQRRRSMNNSSKDITAPEVSPTKDRKLHVCLMCPYTNQRQDALFNHYRRHDETDLLSSGSHKCSYCGLVVVQSHFLREHLKTHFTYQKNLTPECFVANENVSFTITNLDENDLSSDLKLHSINQSSHCDDNKIFVKIKTGEIFAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00843106; iTF_00959793; iTF_00960548; iTF_00959036; iTF_01035068; iTF_01034147; iTF_00419376; iTF_00420938; iTF_00421748;
- 90% Identity
- iTF_00843106; iTF_01034147; iTF_01035068; iTF_00960548; iTF_00959793;
- 80% Identity
- -