Basic Information

Insect: Danaus melanippus
Gene Symbol: -
Assembly: GCA_010014825.1
Location: JAAAKD010002613.1:4168-10740[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 1.2 2.1e+02 4.3 1.8 1 23 50 73 50 73 0.96

2 21 0.14 26 7.2 5.3 1 23 80 103 80 103 0.97

3 21 6.2 1.1e+03 2.0 4.3 1 23 180 202 180 202 0.96

4 21 0.0017 0.31 13.2 1.0 2 23 208 229 207 229 0.97

5 21 2.4 4.3e+02 3.3 1.5 1 23 235 257 235 258 0.94

6 21 0.24 45 6.5 3.2 2 21 487 506 486 507 0.94

7 21 0.19 34 6.8 0.5 2 23 760 781 759 781 0.96

8 21 0.0036 0.67 12.2 0.6 2 23 866 887 865 887 0.96

9 21 1 1.8e+02 4.5 0.4 1 23 895 917 895 917 0.95

10 21 0.07 13 8.2 3.1 1 23 951 973 951 973 0.95

11 21 0.00048 0.088 15.0 5.4 1 23 981 1003 981 1003 0.99

12 21 9.6 1.8e+03 1.4 1.2 1 23 1052 1074 1052 1074 0.85

13 21 0.38 69 5.9 3.5 1 23 1086 1108 1086 1108 0.98

14 21 0.38 70 5.8 2.3 1 19 1165 1183 1165 1187 0.93

15 21 0.88 1.6e+02 4.7 0.3 2 23 1194 1215 1193 1215 0.95

16 21 0.011 2 10.7 0.4 1 23 1283 1305 1283 1305 0.93

17 21 0.0086 1.6 11.0 1.6 1 23 1311 1333 1311 1333 0.96

18 21 0.0066 1.2 11.4 2.6 1 23 1423 1445 1423 1445 0.97

19 21 0.00017 0.03 16.4 1.4 1 23 1451 1473 1451 1473 0.99

20 21 0.21 39 6.6 1.1 1 23 1565 1587 1565 1587 0.97

21 21 0.0023 0.42 12.8 1.7 2 23 1599 1620 1598 1620 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	1.2	2.1e+02	4.3	1.8	1	23	50	73	50	73	0.96
2	21	0.14	26	7.2	5.3	1	23	80	103	80	103	0.97
3	21	6.2	1.1e+03	2.0	4.3	1	23	180	202	180	202	0.96
4	21	0.0017	0.31	13.2	1.0	2	23	208	229	207	229	0.97
5	21	2.4	4.3e+02	3.3	1.5	1	23	235	257	235	258	0.94
6	21	0.24	45	6.5	3.2	2	21	487	506	486	507	0.94
7	21	0.19	34	6.8	0.5	2	23	760	781	759	781	0.96
8	21	0.0036	0.67	12.2	0.6	2	23	866	887	865	887	0.96
9	21	1	1.8e+02	4.5	0.4	1	23	895	917	895	917	0.95
10	21	0.07	13	8.2	3.1	1	23	951	973	951	973	0.95
11	21	0.00048	0.088	15.0	5.4	1	23	981	1003	981	1003	0.99
12	21	9.6	1.8e+03	1.4	1.2	1	23	1052	1074	1052	1074	0.85
13	21	0.38	69	5.9	3.5	1	23	1086	1108	1086	1108	0.98
14	21	0.38	70	5.8	2.3	1	19	1165	1183	1165	1187	0.93
15	21	0.88	1.6e+02	4.7	0.3	2	23	1194	1215	1193	1215	0.95
16	21	0.011	2	10.7	0.4	1	23	1283	1305	1283	1305	0.93
17	21	0.0086	1.6	11.0	1.6	1	23	1311	1333	1311	1333	0.96
18	21	0.0066	1.2	11.4	2.6	1	23	1423	1445	1423	1445	0.97
19	21	0.00017	0.03	16.4	1.4	1	23	1451	1473	1451	1473	0.99
20	21	0.21	39	6.6	1.1	1	23	1565	1587	1565	1587	0.97
21	21	0.0023	0.42	12.8	1.7	2	23	1599	1620	1598	1620	0.98

Sequence Information

Coding Sequence: ATGTCCTCGCCGCAGAGCGGGCAACTCGGCGAGGTCACGACTCTCGTGCGCCCCCTCGAAGGCCGCCTGTGCGGCGACGCATCATCTGAGGCCTCCTCGGATGCAGCGGAAGATTTTGAATTGCCACAGTGCAAAATTAAGCGCAACTATAACTGCACGAAGTGTACGTTTTACACACAAAACCCACGCTACTATCTGCTACATATGCGTGACGTTCATTTTGAAAAACTGAAGATTTATGACTGTCCTCATTGTCTTTATGCTTCGCGACATCATCAGAAACTAACGAGACACGTAAAGATGGTTCATGAAGCGACGGGTTCAACGAAGACAGCGGACCCTTTGCCTTCCACTTCTGAAAATACAGATCCCATTGAAAGAATGGAAGAATTGCTCGAAGAAGTAGAAGATTGCGATGAAATTCTCATGGAAATCGAAGAATGTAATGAAGAGTCCTTAGAGCGTAACTTTGATTCTGAGTCGTCACATCAAGGAGACTCCATATCTTCAGACCAAcctatagataaaaataaattcttttcttgCAACAAATGTAATTACGTGACACATATTAGAGCAAGATATACAAAACACGTCAAGTATCATTCTATGCCAATGATAAAGTGTACCATGTGTGACTTTCGTACTCCTTACAAATGGAATTTGGATCGCCATATGAAAAATCATGGAGGGAACGGAAGCTTCTACTGTTCGATGTGTAATTTCACTGCCGATATTAGACAAAGTTTGACAGTTCACGAAATGAATCATCACACGCCGCCCGTCGGCCAGCTGAGTTCCAATCGGCGTCGGAACCGAGTGGGAGCAAGCGACGTTGAGGCGACGGATGGGAGCACTCTCATTGTAAGAGAGGAGGAAGGAAGCGGTGACTCTCGATCCTCACACTCTGCATCGGAATCAGGGGTTCAATACATGGAGAGAGACATCGTTTGCTGTAACAGTGACTCCAACGAGGCTTTTGCTTCAGACACACCAACAAAAGATAATATGCATCTAAGGAAAGAATTAGAACAGCAAGCTGCTTCATCAGACGAAGGCAAAAATCCAAAACAAAGCAAAAAAATTCCTAGACCCATCCCACAGTTAATACCCCTAAACACCTCAACTCCTACTCAAAACAAGACAAACCCTGGGGAACCACCAGcgaaaaaaatcaaagaatctgaaaaaacagaaaatattgcACCGGAAATAAGTCGAATTTCAGTAAACAACACAGTTTCTaaagaaaacacaaaaacaaaaaagaacgaATCATTTTTCGACAGATTAAAAGAAAGATTACTTACGGAAACCGGTGAGGAGGGGACACTAGTATGTAAAAATTGTGGATTTGAAAGTAAATGTTTATCTGAACATTCTGTCcatgaaaaaaattgttccgCACAATCAAACAGAATATCAACGAATCCTTTGCATTCAAGTTTAGGATCAACGCGATGTCAAAACTGCAGACATCGATGCAAATCGAGTGCAGATCTTTACGTACATATGCAATCATGCAAAAAGAAAGATGATTCTTTAGAAAATACAACAGAAACATACAACCAAGACAGTAGTGAAACACTTTCAAGTAATCTTGAAAAAGAATCAGAACCCCACCCTATGGAAAATGTCGTTTTTGTctggaataatattaatcaaaacaGTAACAAGTTTAATACACCGTTAGATATAAGTATAAATGATGATTCCACGCTTCCCGATCAGGGAACAACCATTGAGTTAGATATAACAGATGAAAATGAAGCGATGAGTTTATCACCCAGTCAAGCGTATgggaaaaatgtatttaaatgtcCTCATTGCTTGTTTTGGGCATCTACAGCTTCTAGATTCCATGTCCACATTGTCGGACATCTTAATAAAAAACCGTTTGAATGTTCCTTATGTAAATATAAGTCTAACTGGAGATGGGATATTACtaaacatattaaacttaaatccGCTAGAGACCCTGAACATACGGATGCTAAGGTCCTCATGACCGATGAAACCGGGAGGAGGAACTAcaccaaatataataaatttttggcaATGCCAATCTTAAATGAAAATGGCAAAACTGAATTCCATTATATCGATCAAAGCACGACCATAGACACTACATTAGACGATGATTCATACGATATAAATGAAGGTACAAACAATTCTTTTGATCTACAACCACTAAATCTACAAACACAGCCAAAcgactttaaatttgaaatcgACGGTAGGATTCAAGAAACTAAGAAGCCTAAAAAATCTGTgtggaaatgtaaaaaatgtaattacagAGATTCGTCGAAGGAAGCTCTGTTGGAACATGTTCGAGAGCATTCGAAGCCTGATGAAAGTGTGGAAGACAGCAAACTTCACATAATCCCTAATAAGAAGCCGGAAAACACGCCCGATCCCGCTGACTTAGCTTACCGATGTGGTCATTGTAATCAACTATCTAACTGGAAACATGTCATACAGagaCACTGTCGATTAAAGCATGATGGAGTGATAAAAGTGATAACAACAATAAAACCTAAACCTGAAGCCAACACATCGACCCCTTCCTCCGGAAATGATCTATCTAATGATACTTGTACCAAATGCCCATATAAATCAACAGATAAGAATACGCTGATAGCACACTTACAACAACATCAGCCGTCCTCACAATCaatattcaaatgttatttctGTCCCTTCTTTGTAAAAGATGAACTCGAATTAATACAACACCTTGTTCTGCATGGCATTACTGATCCAGAAGAATATATATCAAAAGCTATGGGTTGCAGATCACCTTTACCAGAAACGAATACATCGGTCAATTATTCTGGTACCAAACGTCATAAATGTACAGAATGTCCATACGAAACGAATAGTAAATCTCAGTTCATATATCATGAGCAGTTTCATCGACTGCCCGCTGACACTCCTTATAAATGTCAAGAGTGTAATTATAGCGTCTCAAAAAGACACTTGCTACATCAACATATGAGAGTGCATGGTATTTTTGCCAAGAAAAGTGAAATGGACATTGAATTAGAAGCTGCCAATTCTAATCAAGAAGACATCAAAACTgacttctttataaattttgatgaaattcctTTCGTTTGGGTCTCGGCAAAGaatgattttcataaaatgtataaatgtcgCTATTGCTCGTACGTAAATTCACAAAAGAGCACTATACCCAATCATGAAAAAATACactgtatattatttgaaaacagtgatataactatatataaatgtctTGAATGCAAGTTTACTTGTGACACTAAAATTCGGCTAGCAGAACATTCCAAGACACATGGTGAAATATATGGTCGCATATATTGTCAAGTAGAGCCCGACGTGCCCGACGAGGAACAAATAGCAAAACTACGTAAAGTTATAGACAAAGATAAAATGAACTCGCTAGACGAATTACGAAGTGATGAGaatgttattgatattaataatagagataacaaagttttatatttttgtcaaaaatgtcCCTCTAGATTCTTTTCTGAGAGCGAGTTAAAAGTTCATGATAAATTTCATGACCTGTCTTTTTGTAACAAATGCAAGAGTTGTGAATTTTCCGTACCTCAGGAAAGTGATATGACTGCTCACAATATAAGCCATACTGAcgaatacaatacaaaaacaaaaatgctcaaatttattcacaaaatCCATCCCATTTATAAAGTACCGAAATTGCAGCTTGTACATTGTCCGATAACTTCGGAAGTGACTTGGGTTGTAGCAAATCCGggaaacaattacaatataaatgaaaacaacacTAGGAAATCTACCGAAACAAAGCATGCACCAAAACAATACCTTTGTAAAGAATGTCCTGCGAAGTTTTTCAAAAGTTCAGCATTAAGTTATCATATGGGATTACACGGTGGAGATGGAGACCATAAATGCAAAAAATGTAGTTATTCTGTAAAGAACATTGGAAACCTTGCAAAACATGAGTTACTTCATGAAAATGAACATAAAGTGTCAACAGTAGATTATGAATCTGGGGAGGATttagactataaaaatattcccttGTCTGGAACTGAcctatttcaaagaaaaactgAAGCCCAGAAAAGAGTGCTAACTGATAAAGATAAACTCGTTAAACCAAATGATCATTTTCCTCCAGTACTTCAAGCTGATCCTCAATTTGGTTATTTAATGCATGGCAATCCAGAATTTATATATCCCACCTATTTAAAGAATGGACGCCAAAAAGAGAAACGTTACAAATGCCATAAATGTCCATCGGCGTTCGAAAAGCGCGAGCAATATAAAATCCACTTATCCCTTCATGGTTCGAAACAAAGGTATAAATGTGAACTTTGCGATTATTCCGTTAAATATTATGCTAATTACGTGCAACATATGCGAAAACATCAAATGAATGATGAAGCTCAAGccgaaagaaaaaaatgtaacgGTTTTATTGAAACTGAGACCGACAAAGCAGAAAATAAACTCGACGACAGCGGTGATAATATAAAACTAGCAATTAAAACAATGCCAAAAAGACCACCTAGAAGCGATTTTCAACAATTTTCGGTTAGCGATCAGCAGACACTTCGCCTGTTACAACGTAGGCGTTCTATGAATAATTCTTCTAAAGATGCTAACACATCTGATGTTTCACCAATAAAGGATCGTAAATTACATGTATGTCTACTGTGTCCGTATACAAACCAACGTCAGGACGCTCTTTGGAATCACTACAGAAGACACGATGAAACAGAGCGATTATGTTCTGGTAATCAAAAATGTTCATACTGCGATTTGGTCGTGGTGCAATCTCATTTCCTCCGTGAGcacctaaaaacacattttaattatcaaaagaaTCTGACTCCAGAGTGCTTCGTTGCTAACGAAAACGTTAGCTTTACAATAACCAAATTAGATGACAACGATTTGTCTAGTAATCTCAAATTAGATTCCATTAATCAAAGTTTACCATGTAGTGATAAtaagatatttgttaaaattaaaactggtGAAGTATACgttgaataa
Protein Sequence: MSSPQSGQLGEVTTLVRPLEGRLCGDASSEASSDAAEDFELPQCKIKRNYNCTKCTFYTQNPRYYLLHMRDVHFEKLKIYDCPHCLYASRHHQKLTRHVKMVHEATGSTKTADPLPSTSENTDPIERMEELLEEVEDCDEILMEIEECNEESLERNFDSESSHQGDSISSDQPIDKNKFFSCNKCNYVTHIRARYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGNGSFYCSMCNFTADIRQSLTVHEMNHHTPPVGQLSSNRRRNRVGASDVEATDGSTLIVREEEGSGDSRSSHSASESGVQYMERDIVCCNSDSNEAFASDTPTKDNMHLRKELEQQAASSDEGKNPKQSKKIPRPIPQLIPLNTSTPTQNKTNPGEPPAKKIKESEKTENIAPEISRISVNNTVSKENTKTKKNESFFDRLKERLLTETGEEGTLVCKNCGFESKCLSEHSVHEKNCSAQSNRISTNPLHSSLGSTRCQNCRHRCKSSADLYVHMQSCKKKDDSLENTTETYNQDSSETLSSNLEKESEPHPMENVVFVWNNINQNSNKFNTPLDISINDDSTLPDQGTTIELDITDENEAMSLSPSQAYGKNVFKCPHCLFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHTDAKVLMTDETGRRNYTKYNKFLAMPILNENGKTEFHYIDQSTTIDTTLDDDSYDINEGTNNSFDLQPLNLQTQPNDFKFEIDGRIQETKKPKKSVWKCKKCNYRDSSKEALLEHVREHSKPDESVEDSKLHIIPNKKPENTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTIKPKPEANTSTPSSGNDLSNDTCTKCPYKSTDKNTLIAHLQQHQPSSQSIFKCYFCPFFVKDELELIQHLVLHGITDPEEYISKAMGCRSPLPETNTSVNYSGTKRHKCTECPYETNSKSQFIYHEQFHRLPADTPYKCQECNYSVSKRHLLHQHMRVHGIFAKKSEMDIELEAANSNQEDIKTDFFINFDEIPFVWVSAKNDFHKMYKCRYCSYVNSQKSTIPNHEKIHCILFENSDITIYKCLECKFTCDTKIRLAEHSKTHGEIYGRIYCQVEPDVPDEEQIAKLRKVIDKDKMNSLDELRSDENVIDINNRDNKVLYFCQKCPSRFFSESELKVHDKFHDLSFCNKCKSCEFSVPQESDMTAHNISHTDEYNTKTKMLKFIHKIHPIYKVPKLQLVHCPITSEVTWVVANPGNNYNINENNTRKSTETKHAPKQYLCKECPAKFFKSSALSYHMGLHGGDGDHKCKKCSYSVKNIGNLAKHELLHENEHKVSTVDYESGEDLDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKCNGFIETETDKAENKLDDSGDNIKLAIKTMPKRPPRSDFQQFSVSDQQTLRLLQRRRSMNNSSKDANTSDVSPIKDRKLHVCLLCPYTNQRQDALWNHYRRHDETERLCSGNQKCSYCDLVVVQSHFLREHLKTHFNYQKNLTPECFVANENVSFTITKLDDNDLSSNLKLDSINQSLPCSDNKIFVKIKTGEVYVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00461965;
90% Identity: iTF_00421748;
80% Identity: -