Basic Information

Insect: Danaus chrysippus
Gene Symbol: -
Assembly: GCA_004959915.1
Location: RPCZ01000024.1:651184-657820[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 1 73 4.3 1.8 1 23 54 77 54 77 0.96

2 20 0.13 9.1 7.2 5.3 1 23 84 107 84 107 0.97

3 20 5.4 3.9e+02 2.0 4.3 1 23 183 205 183 205 0.96

4 20 0.0015 0.11 13.2 1.0 2 23 211 232 210 232 0.97

5 20 2.1 1.5e+02 3.3 1.5 1 23 238 260 238 261 0.94

6 20 0.21 15 6.5 3.2 2 21 490 509 489 510 0.94

7 20 0.16 12 6.8 0.5 2 23 763 784 762 784 0.96

8 20 0.0055 0.4 11.4 0.8 2 23 869 890 868 890 0.96

9 20 0.19 13 6.6 1.4 1 23 898 920 898 920 0.95

10 20 0.061 4.4 8.2 3.1 1 23 954 976 954 976 0.95

11 20 0.00042 0.03 15.0 5.4 1 23 984 1006 984 1006 0.99

12 20 0.0071 0.51 11.1 0.9 1 23 1088 1110 1088 1110 0.99

13 20 0.065 4.7 8.1 2.5 1 23 1167 1189 1167 1189 0.94

14 20 1.8 1.3e+02 3.5 0.1 2 23 1196 1217 1195 1217 0.95

15 20 0.0094 0.68 10.7 0.4 1 23 1283 1305 1283 1305 0.93

16 20 0.0074 0.54 11.0 1.6 1 23 1311 1333 1311 1333 0.96

17 20 0.0058 0.42 11.4 2.6 1 23 1423 1445 1423 1445 0.97

18 20 0.00014 0.01 16.4 1.4 1 23 1451 1473 1451 1473 0.99

19 20 0.19 14 6.6 1.1 1 23 1565 1587 1565 1587 0.97

20 20 0.002 0.14 12.8 1.7 2 23 1599 1620 1598 1620 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	1	73	4.3	1.8	1	23	54	77	54	77	0.96
2	20	0.13	9.1	7.2	5.3	1	23	84	107	84	107	0.97
3	20	5.4	3.9e+02	2.0	4.3	1	23	183	205	183	205	0.96
4	20	0.0015	0.11	13.2	1.0	2	23	211	232	210	232	0.97
5	20	2.1	1.5e+02	3.3	1.5	1	23	238	260	238	261	0.94
6	20	0.21	15	6.5	3.2	2	21	490	509	489	510	0.94
7	20	0.16	12	6.8	0.5	2	23	763	784	762	784	0.96
8	20	0.0055	0.4	11.4	0.8	2	23	869	890	868	890	0.96
9	20	0.19	13	6.6	1.4	1	23	898	920	898	920	0.95
10	20	0.061	4.4	8.2	3.1	1	23	954	976	954	976	0.95
11	20	0.00042	0.03	15.0	5.4	1	23	984	1006	984	1006	0.99
12	20	0.0071	0.51	11.1	0.9	1	23	1088	1110	1088	1110	0.99
13	20	0.065	4.7	8.1	2.5	1	23	1167	1189	1167	1189	0.94
14	20	1.8	1.3e+02	3.5	0.1	2	23	1196	1217	1195	1217	0.95
15	20	0.0094	0.68	10.7	0.4	1	23	1283	1305	1283	1305	0.93
16	20	0.0074	0.54	11.0	1.6	1	23	1311	1333	1311	1333	0.96
17	20	0.0058	0.42	11.4	2.6	1	23	1423	1445	1423	1445	0.97
18	20	0.00014	0.01	16.4	1.4	1	23	1451	1473	1451	1473	0.99
19	20	0.19	14	6.6	1.1	1	23	1565	1587	1565	1587	0.97
20	20	0.002	0.14	12.8	1.7	2	23	1599	1620	1598	1620	0.98

Sequence Information

Coding Sequence: ATGCTACAACAGATGTCCTCGCCGCAGAGCGGGCAACTCGGCGAGGTCACGCCTCTCGTGCGCCCCCTCGAAGGCCGCCTGTGCGGCGACGCATCATCTGAGGCCTCCTCGGATGCAGCGGAAGATTTTGAATTGCCACAGTGCAAAATTAAACGCAACTATAACTGCACCAAGTGTACGTTTTACACACAGAACCCACGCTACTACCTGCTGCATATGCGTGACGTTCACTTTGAAAAACTGAAGATTTATGACTGCCCTCATTGTCTTTATGCTTCGAGACATCATCAGAAATTAACGAGACACGTCAAGATGGTTCATGAAGCAGGCTCGACGAAGACAGCGGAACCCTTGCCTTCAACTTCTGAAAATACAGATCCCATTGAAAGGATGGAAGAATTACTCGAAGAAGTCGAAGAATGCGATGACATTCTTATGGAAATCGAAGAATGTAATGAAGAGTCCTTAGAGCGTAACTTTGATACTGAGTCGTCACATCAAGGGGACTCCATATCTTCGGACCAACCGacggataaaaataaattcttttcttGCAACAAATGCAATTACGTGACACATATCAGAGCAAGATATACAAAACACGTCAAGTATCATTCTATGCCAATGATAAAGTGTACCATGTGTGACTTTCGTACGCCTTACAAATGGAATTTGGATCGTCATATGAAAAATCACGGCGGGAACGGAAGCTTCTACTGTTCGATGTGTAATTTCACGGCCGATATTAGACAGAGTTTGACAGTTCACGAAATGAATCATCACACGCCGCCCGTCGGCCAGCTGAGCTCCAATCGGCGTCGGAACCGGGTGGGAGCGAGCGACGTTGAGGCGACGGATGGGAGCGCTCTCATAGTAAGAGAGGAGGAAGGAAGCGGTGACTCTCGGTCCTCACACTCTGCATCGGAATCAGGTGTTCAATACATGGAGAGAGACATCGTTTGCTGTAACAGTGACTCCAACGAAGCTTCTGCTTCAGAAACACCGACAAAAGATAATATGCATCTAAGGAAAGAATTAGAACAGCAAGCTGCTTCATCAGACGAAGGCAAAAATCCAAAACAAAGCAAAAAGATTCCAAGACCCATCCCGCAGTTAATACCCCTTAATACCTCAACTCCTACTCAAAACAAGACAAATTCTGGGGAACCACCAGCGAAAAAACTCAAAGAATCGGaaaaaacagaaaatgtaACACCGGAAATAAGTCGAACTCCAGTAAACAACACAGTTTCTAAAGAAAacactaaaacaaaaaagaacgAATCATTTTTCGACAGATTAAAAGAAAGATTGCTTACGGAAACCGGTGAGGAGGGAACACTAGTATGTAAAAATTGCGGATTTGAAAGTAAATGTTTATCTGAACATTCTGttcatgaaaaaaattgttccgCACAATCAAACCGAATATCAACAAATCCTTTGCATTCAAGTTTAGGATCAACACGATGTCAAAACTGTAGACATCGATGCAAATCGAGTGCTGATCTTTACGTACATATGCAATCATGCAAAAAGGTAGATGATTCTTTAGAAAGTACAACAGAAACACACAACCAAGACAGTAGTGAAACTCCCTCCGTTAATCTTGAAAAAGAATCAGAACCACACCCTATGGAAAATGTAGTTTTTGTctggaataatattaatcaaaatagtGACAAGTTTAATACACCGTTAGACATAAGTATAAATGATGATTCCACGCTACCAGAACAGGGAACAACTATAGAGCTAGATATAACAGATGAAAATGAGTCAATGAGTTTATCACCCAGCCAAGCGTATgggaaaaatgtatttaaatgccCTCATTGCTTGTTTTGGGCATCTACAGCTTCTAGATTCCACGTACACATCGTCGGGcatcttaataaaaaaccgTTTGAATGttcattatgtaaatataagtcTAACTGGAGATGGGACATTACTAAACATATTAAACTCAAATCCGCTAGAGACCCTGAACACGCGGAAGCTAAAGTGCTTATGACCGATGAAACTGGGAGGAGGAACTAcaccaaatataataaatttttagcaatgccaatattaaatgaaaatggaaAAACTGAATTCCATTACATTGATCAAACCACTACCATAGACACAACTTTAGATGATGATTCATACGATTTAAATGAAGGTATTAATAACTCTTTAGATCTACAACCACTAAATTTACAAACGCAGCCAAACGaattgaaatttgaaatagACGGTAGGATTCAAGAAACTAAGAAGCCTAAAAAATCTGTGtggaaatgtaaaaaatgtaattacagAGATTCGTCGAAGGAAGCTCTGTTGGAACATGTTCGAGAACATTCGAAGCCAGAAGAAGGTGTAGAAGACAGCAAACTTCACGTAATCCCTAATAAGAAGCCGGAAAACACGCCCGATCCTGCTGACTTAGCTTACCGATGTGGCCATTGTAATCAACTATCGAACTGGAAACATGTCATACAGAGACACTGTCGGTTAAAGCATGATGGAGTTATAAAAGTgataacaacaataaaacctAAACCCGAAGGCAACACATCGACCCCTTCCTCCGTGAATGACCTATCTAATGATACTTGTACCAAATGCCCATACAAATCAACAGATAAGAATACGCTATTAGCACACTTACAACAACATCAGCCGTCCTCACAATCAATATTCAAATGTTATTTCTGTCCCTTCTTTGTAAAAGATGAACACGAATTAATACAACACCTTGTTCTACATGGCATTACGGATCCAGaagaatatatatcaaaagcTATGGGTTGCAGATCACCTTTACCAGAAACTAATGCATCGATCAATTATAGTGGTACCAAACGTCATAAATGTACAGAGTGTCCATACGAAACGAATAGTAAATCTCAGTTCATATATCACGAGCAGTTTCATCGACTGCCCGCTGACACTCCTTATAAATGTCAAGAGTGTAATTATAGTGTCTCAAAAAGACACTTACTACATCAACATATGAGGGTTCATGGAATTTTTGCTAAGAAAAGTGAAATGGACATTGAATTAGAAGCTGCTAATTCAAATCAAGAAGACATCAAAAttgaatttacaaattttgatgaaattccTTTCGTGTGGGTCTCTGCAAAGAATGACTtccataaaatgtataaatgtcGTTATTGCTCGTACGTAAATTCACAAAAGAGCAAAATACCCAATCATGAAAAATTACACTAtatatcatttgaaaacagtgatattactatgtataaatgtCTTGAATGCAAGTTTACTTATGACACTAAAATTTGGCTAGCAGAACATTCCAAGACACATGGTGAAATATATGGTCGCATTTATTGTCAAGTGGAGCCCGACGTACCCGACGAGGAACAGATAGCAAAACTACGGAAAGTTATGGACAAAGATAAAATGAACGCGCTAGACGAATTACAAAGTGATGAGAatgttattgatattaatagtaCAGATAACAAAGttctatatttttgtcaaaaatgtCCCTCGAGATTCTTTTCTGAGAGCGAGTTAAaagttcataataaatttcatgacCTGTCTTTTTCTAACAAATGCAAGAGTTGTGAATTTTCAGTACCTCAGGAAAGTGATATGGCTGCTCATAATATAAGCCATACTGAcgaatacaatacaaaaacaaaaatgctcaaattcatttacaaaatacatcCCATTTATAAAGTACCCAAATTGCAGCTTGTACATTGTCCAATAACTTCGGAAGTGACATGGGTTGTAGCAAATCCGGGAagcaatataaatgaaaacaacacCAGGAAATCTACCGAAACAAAGCATGCACCAAAACAATACCTATGTAAAGAATGTCCTGCGAAGTTCTTCAAAAGTTCAGCCTTAAGTTATCATATGGGATTACACGGTGGAGATGGAGACCATAAATGCAAAAAATGTAGTTATTCTGTAAAGAACATTGGAAACCTTGCAAAACATGAATTACTTCATGAAAATGAGCATAAAGTGTCAACAGTGGATTATGAATCTGGGGAGGATTTAGACTATAAAAACATCCCCCTGTCTGGAACTGacttatttcaaagaaaaactgAAGCCCAGAAAAGAGTGCTAACTGATAAAGATAAACTCGTTAAACCAAATGATCATTTTCCTCCAGTACTCCAAGCTGATCCCCAATTTGGTTATTTAATGCATGGCAATCCAGAATTTATATATCCCACTTATTTAAAGAATGGACGCCAAAAAGAGAAACGTTACAAATGCCATAAATGTCCATCGGCGTTCGAAAAGCGcgaacaatataaaatccactTATCCCTTCATGGTTCAAAACAAAGGTATAAATGTGAACTTTGTGATTATTCCGTTAAATATTATGCTAATTACGTACAACATATGCGAAAACACCAAATGAATGATGAAGCTCAAGccgaaagaaaaaaatgtaacggTTTTATTGAAACTGATAATGACAAATCAGAAAATAAGCTCGACGACAGCggtgataatataaaactagcaATTAAAACAATGCCAAAAAGACCACCTAGAAGCGATTTTCAACAATTTTCAGTTAGCGATCAGCAGACACTTCGATTGTTACAGCGTAGGCGTTCTATGAATAATTCTTCTAAAGATGCTAACACATCTGACGTTTCGCCAATAAAAGACCGTAAATTGCATGTATGTCTACTCTGTCCGTATACAAACCAACGTCAGGACGCGCTTTGGAATCACTACAGAAGACACGATGAAACAGAGCGATTATGTTCTGGTAATCAAAAATGTTCATACTGCGATTTGGTCGTGGTGCAATCTCATTTCCTCCGTGAACAcctaaaaacacattttaattatcagaAGAACTTGACTCCAGAGTGCTTCGTTGCTAACGAAAACGTTAGCTTTACAATAACCAAATTAGATGACAACGATTTGTCTAGTGATCTCAAATTAGATTCCATTAATAATCAAAGTTTACCATGTAgtgatagtaaaatatttgttaaaattaaaactggtGAATTATATGTTGaataa
Protein Sequence: MLQQMSSPQSGQLGEVTPLVRPLEGRLCGDASSEASSDAAEDFELPQCKIKRNYNCTKCTFYTQNPRYYLLHMRDVHFEKLKIYDCPHCLYASRHHQKLTRHVKMVHEAGSTKTAEPLPSTSENTDPIERMEELLEEVEECDDILMEIEECNEESLERNFDTESSHQGDSISSDQPTDKNKFFSCNKCNYVTHIRARYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGNGSFYCSMCNFTADIRQSLTVHEMNHHTPPVGQLSSNRRRNRVGASDVEATDGSALIVREEEGSGDSRSSHSASESGVQYMERDIVCCNSDSNEASASETPTKDNMHLRKELEQQAASSDEGKNPKQSKKIPRPIPQLIPLNTSTPTQNKTNSGEPPAKKLKESEKTENVTPEISRTPVNNTVSKENTKTKKNESFFDRLKERLLTETGEEGTLVCKNCGFESKCLSEHSVHEKNCSAQSNRISTNPLHSSLGSTRCQNCRHRCKSSADLYVHMQSCKKVDDSLESTTETHNQDSSETPSVNLEKESEPHPMENVVFVWNNINQNSDKFNTPLDISINDDSTLPEQGTTIELDITDENESMSLSPSQAYGKNVFKCPHCLFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHAEAKVLMTDETGRRNYTKYNKFLAMPILNENGKTEFHYIDQTTTIDTTLDDDSYDLNEGINNSLDLQPLNLQTQPNELKFEIDGRIQETKKPKKSVWKCKKCNYRDSSKEALLEHVREHSKPEEGVEDSKLHVIPNKKPENTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTIKPKPEGNTSTPSSVNDLSNDTCTKCPYKSTDKNTLLAHLQQHQPSSQSIFKCYFCPFFVKDEHELIQHLVLHGITDPEEYISKAMGCRSPLPETNASINYSGTKRHKCTECPYETNSKSQFIYHEQFHRLPADTPYKCQECNYSVSKRHLLHQHMRVHGIFAKKSEMDIELEAANSNQEDIKIEFTNFDEIPFVWVSAKNDFHKMYKCRYCSYVNSQKSKIPNHEKLHYISFENSDITMYKCLECKFTYDTKIWLAEHSKTHGEIYGRIYCQVEPDVPDEEQIAKLRKVMDKDKMNALDELQSDENVIDINSTDNKVLYFCQKCPSRFFSESELKVHNKFHDLSFSNKCKSCEFSVPQESDMAAHNISHTDEYNTKTKMLKFIYKIHPIYKVPKLQLVHCPITSEVTWVVANPGSNINENNTRKSTETKHAPKQYLCKECPAKFFKSSALSYHMGLHGGDGDHKCKKCSYSVKNIGNLAKHELLHENEHKVSTVDYESGEDLDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKCNGFIETDNDKSENKLDDSGDNIKLAIKTMPKRPPRSDFQQFSVSDQQTLRLLQRRRSMNNSSKDANTSDVSPIKDRKLHVCLLCPYTNQRQDALWNHYRRHDETERLCSGNQKCSYCDLVVVQSHFLREHLKTHFNYQKNLTPECFVANENVSFTITKLDDNDLSSDLKLDSINNQSLPCSDSKIFVKIKTGELYVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00461965;
90% Identity: iTF_00421748;
80% Identity: -