Basic Information

Insect: Dircenna loreta
Gene Symbol: Sall1
Assembly: GCA_963555665.1
Location: OY743090.1:9590523-9592058[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0054 0.46 11.7 0.0 2 23 186 207 185 207 0.97

2 11 0.00065 0.056 14.6 2.8 1 23 213 236 213 236 0.95

3 11 0.00011 0.0098 16.9 0.7 1 23 243 265 243 265 0.98

4 11 1e-05 0.0009 20.2 1.2 1 23 271 293 271 293 0.98

5 11 3.7e-06 0.00032 21.6 0.7 1 23 299 321 299 321 0.97

6 11 0.0019 0.16 13.1 1.2 1 23 327 349 327 349 0.96

7 11 2.3e-05 0.0019 19.1 0.7 2 23 356 378 356 378 0.97

8 11 0.00056 0.048 14.8 0.8 2 23 384 402 383 402 0.95

9 11 0.00078 0.067 14.3 0.1 1 23 408 431 408 431 0.95

10 11 0.04 3.5 8.9 0.2 1 23 437 462 437 462 0.91

11 11 2e-05 0.0017 19.3 1.8 1 23 468 491 468 491 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0054	0.46	11.7	0.0	2	23	186	207	185	207	0.97
2	11	0.00065	0.056	14.6	2.8	1	23	213	236	213	236	0.95
3	11	0.00011	0.0098	16.9	0.7	1	23	243	265	243	265	0.98
4	11	1e-05	0.0009	20.2	1.2	1	23	271	293	271	293	0.98
5	11	3.7e-06	0.00032	21.6	0.7	1	23	299	321	299	321	0.97
6	11	0.0019	0.16	13.1	1.2	1	23	327	349	327	349	0.96
7	11	2.3e-05	0.0019	19.1	0.7	2	23	356	378	356	378	0.97
8	11	0.00056	0.048	14.8	0.8	2	23	384	402	383	402	0.95
9	11	0.00078	0.067	14.3	0.1	1	23	408	431	408	431	0.95
10	11	0.04	3.5	8.9	0.2	1	23	437	462	437	462	0.91
11	11	2e-05	0.0017	19.3	1.8	1	23	468	491	468	491	0.96

Sequence Information

Coding Sequence: atggaCTCATTATTATGCAGGATCTGTCTTGATAAGACCGGCACTATTTGTATATTCGACTGTGAATCCGATAATATGCaatatagcaataaaataatgcgaATAGTCAATATCATTATCAACGAGGATGATGGCTTACCTAGTATGATTTGTGAAGGTTGTGCCAGCGAGCTGTCTTTATCCTATCAATTTGTCCAAAAATGTGTGGCCTCAGACAAGGCGTTGCGCTGTTTAAGTGCCCCTATCGAATTGTACTCAGATCTTCAAGTGGATATCAAGAACATAAAAGaagaagatattaaaaatgaaaatgatgaTGGTGATAATGAATTTGATGAAAACTTTCTGTTAGAAAATTGTTCCAGGCAAGATTTTGAAAAACGACAATGCGCAGATAAAGTTGAGGATGGTATAAAAAAGGACAGCAAAAATGTTAACAGTAAACAAGACCATAATTCAGATAATCAACCATTTCATGAACAAGACAAAAAGAGTAAAACTACAAAACCCAagattcgtaaaaaaaaaatgggtaGAGGAAGAGTGGGACCCATACAATGTGTTATTTGTGGTCTGTTGTCTGGTAGTCCTTCTGCAATGGAAATTCACATGCGAACACACACAGGTGAAAAACCATTTATGTGCACCAATTGTGATTCCAAGTTCTATACAAAGGGTTCCCTAAAGAGGCACAATGAAACCTTCCACATAGCTAGAGAACGTAAATTCACCTGTGAGACCTGCGGAAGCAgcttttttagaaaaaatgaCATTATAACTCACATAAGAATACATACAGATGAAAGGCCTTATATCTGTCCATATTGTTCTAAAAGGTTTCGCCAGGTGGCTTCTAGAAATCGGCACCAAAGAGTACACACGGGGGAGAAACCATATGCTTGTCCTGTGTGTGGTAAAAAGTTTTCCCAAAAGAATTTTGTGACAAAACATCAATCGGTTCACAGTGATGAGAGAAAATACACATGTCACTTGTGCAGCAAATCAATGAAGTCAAGGACAGCACTAAATGTACACATAGGATTGCACAccaatgaaaaacaaaatgtatgtaatttttgtgGAAATTCATTTTCTATGAGAGGCAACTTGAGATTACATATCCGCCGTATGCACTCTGAGAAATCTGGTCAATGTACCATttgttcaaaaacattttcagaCTTAGAAGTACATATGCGGAAGCATACAGGTGAAAAGCCATATGTCTGCGGCATTTGTAATGCAACCTATGCCGTCAAGCGAAGTCTAACCAGCcatattattcttaaacatGAAAATGCtggtaaatttaaatgttcaattGGAGACTGCAAAAAGACTTTCCCTGTAGCTCCAATGCTGGAATTTCACTTACTGAAGCAACACACAAATCATACCCCCTATACTTGCCAGCATTGTCCTAGACAGTTCTTTAGAAGCGGTGATCTTGCTCGTCATTTAAAAGCAAGTCATATTGATGTTCAATCTAAGTCATCAGTCAAAACTCTTGCACCAAAACCTATGTCTTATGCATAA
Protein Sequence: MDSLLCRICLDKTGTICIFDCESDNMQYSNKIMRIVNIIINEDDGLPSMICEGCASELSLSYQFVQKCVASDKALRCLSAPIELYSDLQVDIKNIKEEDIKNENDDGDNEFDENFLLENCSRQDFEKRQCADKVEDGIKKDSKNVNSKQDHNSDNQPFHEQDKKSKTTKPKIRKKKMGRGRVGPIQCVICGLLSGSPSAMEIHMRTHTGEKPFMCTNCDSKFYTKGSLKRHNETFHIARERKFTCETCGSSFFRKNDIITHIRIHTDERPYICPYCSKRFRQVASRNRHQRVHTGEKPYACPVCGKKFSQKNFVTKHQSVHSDERKYTCHLCSKSMKSRTALNVHIGLHTNEKQNVCNFCGNSFSMRGNLRLHIRRMHSEKSGQCTICSKTFSDLEVHMRKHTGEKPYVCGICNATYAVKRSLTSHIILKHENAGKFKCSIGDCKKTFPVAPMLEFHLLKQHTNHTPYTCQHCPRQFFRSGDLARHLKASHIDVQSKSSVKTLAPKPMSYA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00842883; iTF_00958826; iTF_01033946; iTF_00959579; iTF_01034846; iTF_00960336;
90% Identity: iTF_00960336; iTF_00959579; iTF_00958826; iTF_01034846; iTF_00842883; iTF_01033946;
80% Identity: -