Basic Information

Insect: Ithomia salapia
Gene Symbol: Sall1
Assembly: GCA_028829205.1
Location: JAPOND010000155.1:661914-663443[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0055 0.48 11.7 0.0 2 23 184 205 183 205 0.97

2 11 0.00086 0.074 14.2 4.8 1 23 211 234 211 234 0.95

3 11 0.00012 0.01 17.0 0.7 1 23 241 263 241 263 0.98

4 11 1.1e-05 0.00092 20.2 1.2 1 23 269 291 269 291 0.98

5 11 5.3e-06 0.00045 21.2 0.8 1 23 297 319 297 319 0.97

6 11 0.002 0.17 13.1 1.2 1 23 325 347 325 347 0.96

7 11 2.3e-05 0.002 19.2 0.7 2 23 354 376 354 376 0.97

8 11 0.00058 0.05 14.8 0.8 2 23 382 400 381 400 0.95

9 11 0.00042 0.036 15.2 0.2 1 23 406 429 406 429 0.95

10 11 0.042 3.6 8.9 0.2 1 23 435 460 435 460 0.91

11 11 2.1e-05 0.0018 19.3 1.8 1 23 466 489 466 489 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0055	0.48	11.7	0.0	2	23	184	205	183	205	0.97
2	11	0.00086	0.074	14.2	4.8	1	23	211	234	211	234	0.95
3	11	0.00012	0.01	17.0	0.7	1	23	241	263	241	263	0.98
4	11	1.1e-05	0.00092	20.2	1.2	1	23	269	291	269	291	0.98
5	11	5.3e-06	0.00045	21.2	0.8	1	23	297	319	297	319	0.97
6	11	0.002	0.17	13.1	1.2	1	23	325	347	325	347	0.96
7	11	2.3e-05	0.002	19.2	0.7	2	23	354	376	354	376	0.97
8	11	0.00058	0.05	14.8	0.8	2	23	382	400	381	400	0.95
9	11	0.00042	0.036	15.2	0.2	1	23	406	429	406	429	0.95
10	11	0.042	3.6	8.9	0.2	1	23	435	460	435	460	0.91
11	11	2.1e-05	0.0018	19.3	1.8	1	23	466	489	466	489	0.96

Sequence Information

Coding Sequence: atggACTCGCTATTATGCAGAATCTGTCTTGATAAGACCGGTACTATATCAATATTCGACTGTGAATCTGATAATATGCAATACAGCAATAAAATAATGCGAAttgttaatatcattattaacgAGGATGATGGCTTACCTAGTATGATATGCGAAATGTGTGCCAGCGAACTCTCTTTATCCTATCAATTTGTTCAAAAATGCATGGCTTCAGACAAGGCATTACGTTGTTTAAGTGCACCTATCGAGTTGTACTCAGATCTTCAAGTAGatatcaaaaacataaaagaagAAGACATTAAAAATGAAAAGGATGATGTTGATAATGAATTTGATGAAAGCTTTCTGTTAGAAAATTGTTCTGTACAAGATTTTGAAAAGCGACATTATGCAGATAATGAGGATGGTATAAAAAAgaacattaacaattttaagGGTAAACAAAACTATAACACAGACACACAACATCATGAACAAGATAAAAAGACTAAAACTGCAAAAGCTaagattcaaaaaaaaaaaacgggaAGAGGAAAAATGGGACCCATACAGTGTGTAATTTGTGGCCTGTTGTCTGGAAGTCCCTCAGCAATGGAAATTCATATGCGTACACACACTGGTGAAAAACCATTTATGTGTACCCATTGTGATTCAAAGTTCTATACAAAGGGTTCTTTAAAAAGACACAATGAAACCTTCCACATAGCTAGAGAACGCAAATTCACCTGCGAGACCTGTGGCAGTAGCTTTTTCAGAAAAAATGACATCATAACTCACATCAGAATACATACAGATGAGAGACCATATATATGTCCATATTGTTCTAAAAGATTTCGCCAGGTTGCTTCCAGAAATCGGCACCAAAGAGTACACACAGGGGAAAAACCATATGCTTGTCCTGTATGTGGTAAAAAGTTTTCCCAAAAGAATTTTGTGACAAAACATCAAACTGTTCATAGTGATGAGAGAAAGTACACATGCCACTTGTGCAGCAAATCTATGAAGTCAAGGACAGCTCTGAATGTCCACATAGGTTTGCACACAAATGAAAAgcaaaatgtatgtaatttttgtGGAAATTCATTTTCTATGAGAGGCAATTTGCGATTACATATCCGACGAATGCACTCGGAGAAATCTGGCCAATGTACTATTTGTTCTAAAACATTTTCAGACTTGGAGGTACACATGCGGAAGCATACTGGTGAAAAGCCTTATGTCTGCAGCATTTGTAACGCAACTTATGCAGTCAAGCGGAGTCTAACCAGTCATATTATTCTTAAACATGAAAATGCTGgtaaatttaaatgttcaatCGGAGACTGCAAAAAGACTTTTCCTGTAGCCCCAATGTTGGAATTTCACTTACTGAAGCAACACACAAATCATACCCCTTATACCTGCCAGCATTGTCCTAGACAGTTCTTTAGAAGTGGTGATCTTGCTCGTCACTTAAAAGCAAGTCATATTGACATTCAATCTAAGTCGCCAGTCAAATCTCTTGCACCCAAACCTACAACCTACACATAA
Protein Sequence: MDSLLCRICLDKTGTISIFDCESDNMQYSNKIMRIVNIIINEDDGLPSMICEMCASELSLSYQFVQKCMASDKALRCLSAPIELYSDLQVDIKNIKEEDIKNEKDDVDNEFDESFLLENCSVQDFEKRHYADNEDGIKKNINNFKGKQNYNTDTQHHEQDKKTKTAKAKIQKKKTGRGKMGPIQCVICGLLSGSPSAMEIHMRTHTGEKPFMCTHCDSKFYTKGSLKRHNETFHIARERKFTCETCGSSFFRKNDIITHIRIHTDERPYICPYCSKRFRQVASRNRHQRVHTGEKPYACPVCGKKFSQKNFVTKHQTVHSDERKYTCHLCSKSMKSRTALNVHIGLHTNEKQNVCNFCGNSFSMRGNLRLHIRRMHSEKSGQCTICSKTFSDLEVHMRKHTGEKPYVCSICNATYAVKRSLTSHIILKHENAGKFKCSIGDCKKTFPVAPMLEFHLLKQHTNHTPYTCQHCPRQFFRSGDLARHLKASHIDIQSKSPVKSLAPKPTTYT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00461766;
90% Identity: iTF_00461766;
80% Identity: -