Dcar005951.1
Basic Information
- Insect
- Diorhabda carinata
- Gene Symbol
- LZTR1
- Assembly
- GCA_029229535.1
- Location
- CM055254.1:19256062-19260402[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.1e-10 7.4e-08 33.0 0.0 3 108 354 491 352 493 0.87 2 4 0.043 15 6.3 0.2 77 109 492 524 490 525 0.88 3 4 1.6e-16 5.5e-14 52.8 0.0 8 95 584 671 579 687 0.83 4 4 0.44 1.5e+02 3.0 0.1 76 101 686 711 681 719 0.80
Sequence Information
- Coding Sequence
- atgggTAGTTTAACGGTAGCTGATGCAAATGCGCTTACACTCGAAATCGGCCCCTTTGAAACGGTTCATAGATGGAAACGAATGCCAGAATGTGACGAATTTGTTGGAGCCAGGCGAAGTAAACACACAGTTGTTGCTTACAAAGATGCTATTTATGTGTTCGGAGGAGACAATGGTAAAAGTATGTTAAACGATTTATTACGTTTTGATGTGAAAGAAAAAAGTTGGGGACGTGCGTTCGCTACGGGATCTCCACCTGCACCAAGGTATCATCATTCTGCAGTTGTTTATAACACTTCCATGTTCGTTTTTGGTGGTTATACCGGTGATATTCACTCAAACTCTAatctaacaaataaaaatgatttatttgaatataaattcaattccGGTCAATGGGTGGAGTGGAAATGGTTTCCAGGGCAAACGCCAGTACCTAGATCAGCGCACGGAGCTGctgtttttgataataaactatGGATATTCGCAGGTTATGATGGAAATGCTCGATTGAATGATATGTGGACTATACCTCTAATtGGCGATGTGAAGAGTTGGGAGGAAGTTGATCAAAAGGGTGAATGTCCGCCTACGTGTTGTAATTTCCCCGTTGCAGTAGCTAGGGATTGTATGTTTGTTTTCAGTGGTCAAAGTGGGGCTAAAATAACAAACTCTCTATTTCAATTCGACTTTAAAGATAAAATtTGGACGAGAATATCTACTGAACACATTCTTCGAGGTGCTCCTGCTCCTCCAGCGCGACGTTATGGACATACCATGGTGTCATTTGATAGACATTTATATGTATTTGGTGGAGCTGCAGATTCAACTCTATCGAATGATTTACACTGTTTTGATTTAGATTCACGTAAATGGTCTATAGTATTACCAGATGCGGAATCTTTTGTACCATCCGGTAGGTTGTTTCATGCAGCTGCTGTTGTCGGCGATGCCATGTTCATTTTTGGTGGTACTGGGGATAATAATGTTCGAAGCGGAGAGATGTATagattTCAGTTTTCGAATTATCCCAAATGTACCCTACATGAAGATTACGGTAAATTACTTGAAACGAGAATGTTTTGTGATACTCAATTTATTGTTGGCcccgaagaaaagaaaataaccGGTCACGTCGCTTTGGTGGCTGCTAGATCCGGTTACTTAAGGAAATTGATTCGACAAGCTAAAATTGATCGCGACAAGCATTTAGAAAGAGTGTTTGgtACTTCGAACGTTCCTTTTGCTGATATACCTTTAGCGGAAGTAAAACTTCCTGATGCCGATCCTGAAGCTTTCGAAATggttttgaattatatatacATGGATTGTATCGATCCGACTAAAAGCGGTAGAGATGGTGAAGATCCTTTTTCTAATAGAATCGTTTTGAGGATGATGGACGTTTATAGgttGGCAGTACAATTTAACATGGCGAGATTGGAACATTTGTGTGTTCAATACTTAAATGCtactatttgtttaaaaaatgttctgGTCGCTTTACATAAAGCCGATCAACTTCAGTTGGACTTTATCAAAGAACATTGTTTACGATATATAGTTAAAGAGAGTAATTATAATCAGATAGTAATGAGTACTGAATTTGAAACCTTGGATCGAAGTCTAATGGTGGAAATTATAAGAAGAAAACAGATGCCTCAATATAAGGCCCTTGCTGAAAATCAATTCGATACAGCCGGAGGTTCCCTAGAACAAGATATGGCAATGTTTTTACGAGTAACCGGTAAAGAATTCTGCGACATCGATTTGAACTTAGACGGAAATCTCATTCCGGCTCATAAAACTATCCTAGCCGCTCGATGTGGGTATTTTGAAGCCATGTTTAGATCATTTATGCCAGTTGATAGCAAAGTTAACaTCCAAATAGGTGAAATGATACCATCAAAAGAATCATTCGATTCCCTACTACGATATATCTATTATGGTGATGTAAATATGCCTCCTGAAGATTCTCTCTACCTCTTCTCGGCCCCTTTCTTTTACGGTTTCACCAACAATCGCCTACAAgctttttgtaaacaaaatctCGAAATGAACGTCACTTTCGAAAATGTTATACAAATTTTAGAAGCCGCAGATAAAATGCAAGCCACCGATATGAAAAAATACGCTTTGGATTTAATCGTTCACCATTTTACCAAAgTGGCGAAATTACCCAGATTGCGTTTGCTGAGTAAAGAATTAATTCTGGATATATTAGAAGTTCTTGCGGAAAGTATGGAATCGAATATGCGTAACGACGTTTCGAATTCTCTGTTAAATTTGGATCAATGA
- Protein Sequence
- MGSLTVADANALTLEIGPFETVHRWKRMPECDEFVGARRSKHTVVAYKDAIYVFGGDNGKSMLNDLLRFDVKEKSWGRAFATGSPPAPRYHHSAVVYNTSMFVFGGYTGDIHSNSNLTNKNDLFEYKFNSGQWVEWKWFPGQTPVPRSAHGAAVFDNKLWIFAGYDGNARLNDMWTIPLIGDVKSWEEVDQKGECPPTCCNFPVAVARDCMFVFSGQSGAKITNSLFQFDFKDKIWTRISTEHILRGAPAPPARRYGHTMVSFDRHLYVFGGAADSTLSNDLHCFDLDSRKWSIVLPDAESFVPSGRLFHAAAVVGDAMFIFGGTGDNNVRSGEMYRFQFSNYPKCTLHEDYGKLLETRMFCDTQFIVGPEEKKITGHVALVAARSGYLRKLIRQAKIDRDKHLERVFGTSNVPFADIPLAEVKLPDADPEAFEMVLNYIYMDCIDPTKSGRDGEDPFSNRIVLRMMDVYRLAVQFNMARLEHLCVQYLNATICLKNVLVALHKADQLQLDFIKEHCLRYIVKESNYNQIVMSTEFETLDRSLMVEIIRRKQMPQYKALAENQFDTAGGSLEQDMAMFLRVTGKEFCDIDLNLDGNLIPAHKTILAARCGYFEAMFRSFMPVDSKVNIQIGEMIPSKESFDSLLRYIYYGDVNMPPEDSLYLFSAPFFYGFTNNRLQAFCKQNLEMNVTFENVIQILEAADKMQATDMKKYALDLIVHHFTKVAKLPRLRLLSKELILDILEVLAESMESNMRNDVSNSLLNLDQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01186316;
- 90% Identity
- iTF_00056724;
- 80% Identity
- -