Basic Information

Insect: Dione vanillae
Gene Symbol: -
Assembly: GCA_037178615.1
Location: JAZFAU010000088.1:868321-880130[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 8e-05 0.0088 17.4 2.2 1 23 416 438 416 438 0.97

2 20 0.0058 0.65 11.6 0.7 1 20 444 463 444 466 0.94

3 20 2.2e-05 0.0024 19.2 5.4 1 23 485 507 485 507 0.98

4 20 0.00019 0.021 16.3 4.7 1 23 513 535 513 535 0.99

5 20 3.5e-05 0.0039 18.6 5.3 1 23 541 563 541 563 0.97

6 20 1.1e-05 0.0013 20.1 7.3 1 23 569 591 569 591 0.97

7 20 7.4e-07 8.2e-05 23.8 2.9 1 23 597 619 597 619 0.97

8 20 0.0001 0.011 17.1 6.7 1 23 625 647 625 647 0.97

9 20 0.00023 0.026 16.0 5.6 1 23 653 675 653 675 0.97

10 20 4.8e-07 5.4e-05 24.4 1.9 1 23 681 703 681 703 0.98

11 20 4.7e-05 0.0052 18.2 8.1 1 23 709 731 709 731 0.98

12 20 7.9e-06 0.00087 20.6 6.6 1 23 737 759 737 759 0.98

13 20 6.7e-06 0.00075 20.8 5.8 1 23 765 787 765 787 0.98

14 20 9.4e-06 0.001 20.4 6.4 1 23 793 815 793 815 0.97

15 20 2.2e-05 0.0024 19.2 7.1 1 23 821 843 821 843 0.97

16 20 3e-06 0.00034 21.9 6.0 1 23 849 871 849 871 0.98

17 20 3e-05 0.0033 18.8 7.8 1 23 877 899 877 899 0.97

18 20 2.5e-06 0.00027 22.2 4.1 1 23 905 927 905 927 0.96

19 20 0.0022 0.24 12.9 0.6 1 23 934 956 934 956 0.95

20 20 0.0036 0.4 12.2 4.7 1 23 967 989 967 989 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	8e-05	0.0088	17.4	2.2	1	23	416	438	416	438	0.97
2	20	0.0058	0.65	11.6	0.7	1	20	444	463	444	466	0.94
3	20	2.2e-05	0.0024	19.2	5.4	1	23	485	507	485	507	0.98
4	20	0.00019	0.021	16.3	4.7	1	23	513	535	513	535	0.99
5	20	3.5e-05	0.0039	18.6	5.3	1	23	541	563	541	563	0.97
6	20	1.1e-05	0.0013	20.1	7.3	1	23	569	591	569	591	0.97
7	20	7.4e-07	8.2e-05	23.8	2.9	1	23	597	619	597	619	0.97
8	20	0.0001	0.011	17.1	6.7	1	23	625	647	625	647	0.97
9	20	0.00023	0.026	16.0	5.6	1	23	653	675	653	675	0.97
10	20	4.8e-07	5.4e-05	24.4	1.9	1	23	681	703	681	703	0.98
11	20	4.7e-05	0.0052	18.2	8.1	1	23	709	731	709	731	0.98
12	20	7.9e-06	0.00087	20.6	6.6	1	23	737	759	737	759	0.98
13	20	6.7e-06	0.00075	20.8	5.8	1	23	765	787	765	787	0.98
14	20	9.4e-06	0.001	20.4	6.4	1	23	793	815	793	815	0.97
15	20	2.2e-05	0.0024	19.2	7.1	1	23	821	843	821	843	0.97
16	20	3e-06	0.00034	21.9	6.0	1	23	849	871	849	871	0.98
17	20	3e-05	0.0033	18.8	7.8	1	23	877	899	877	899	0.97
18	20	2.5e-06	0.00027	22.2	4.1	1	23	905	927	905	927	0.96
19	20	0.0022	0.24	12.9	0.6	1	23	934	956	934	956	0.95
20	20	0.0036	0.4	12.2	4.7	1	23	967	989	967	989	0.99

Sequence Information

Coding Sequence: ATGAATCCGGATCACCATAACATTAATACGGGTGGTGGCCAACCTCCAGGCAATTCCGAGTCTCAGAACCAAAGAGTTCAATCGACACAGCAACAACAGCAGAcgcaaacaaataatttaactcCTACAACATCTGCTACCGATTTGAGAGTCAATTCGGCGGCGGTAAACGTTGCCTTGTCAAGCGTGGCTAAATACTGggtgtttacaaatttatttcccGGTCCATTGCCTCAAGTTTCCGTCTATGGCTTACCTACTGGTGCAAGAATTGAAAATGGAAAACCTGTacagGATCTTGGTCAAGCTCATGCAAGTATTTTAAATGGAGAtcctaatattatattaggaCATACTGGACAACCTCAAGTTACAGTTTCAGCAGCAGGTCAACAAATACCTGTCTCACAAATTATTGCTAATCAAGCAACACAAGGACATGATGCCCTGGTAGGACATACACAGCAACAAGAAACAGCAAGCAGCAGTGGTTCACTTGCAGTAGCTCAAACCCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACACCATAACATTGATATGgGCCATCACTCGCAGCAACATATGATGCAGCAGCAGCTGATGGCTGCAGCGCGTCCTGAACATGCGAATCAACAGATTCAGCTAACAGTAAGTGAGGATGGCATAGTAACAGTAGTGGAGCCCGGTGGCGGGAAGCTCGTCGAAAAAGAAGAACTACATGAAACAATCAAAATGCCTACAGATCACACTCTCACTGTGCACCAATTGCAACAGATTGTTGGACACCATcagGTGATTGACAGCGTCGTGCGCATCGAACAAGCGACAGGTGAACCCGCCAATATATTAGTGACGCAGAACCCAGACGGCACCACTTCAATAGAAACTAGCGCCGCCGATCCGTTGCTAGTGAAAGATGAGAAGAATGTCGCTAAAATTGAATCTGCCCAATTTGCTATACCTGCtgaaattaaagatattaaaggAATTGATTTAAAGAGTGTTGGAGCAATGGGCATGGAAGGTGCGGTTGTAAAAATTTCAGCAGCAACTGAACATGACCTCCAACATGCCATGTATAAAGTAAATGTTGAAGACTTATCACAGCTTCTGGCTTATCATGAAGTCTTTGGGAAACTTAATACTGAAAATCAACAACAGGCTAAGGTAATAAGCGAAGTGGAAGTGGAGGCTGGCACTAGCGCCGGTATGTCTGAGGCAGAGTCGTCACCAGGACACCACTCTTGCGATATATGCGGAAAGATATTCCAATTTCGATACCAACTCATAGTTCATAGacGCTACCATGGAGAGAGTAAGCCATTTACTTGTCAAGTTTGTGGATCTGCATTCGCCAATCCAGTGGAACTATCAAAACATGGAAAGTGCCACttagccgGCGACCCTGCTGAGCGTCAAGCAAAAAGACTAGCTCAAGACAAGCCCTATGCCTGCTCCACTTGCCATAAAACATTCTCACGAAAGGAGCATCTCGACAACCATGTACGAAGTCACACTGGTGAAACACCTTACAGATGTCAGTTCTGTGCAAAGACGTTCACACGCAAAGAGCACATGGTGAACCACGTGCGTAAACACACCGGCGAGACGCCGCACCGCTGCGAGATATGCAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCACACAGGTGAAACGCCGCACCATTGTCAAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTCAATCATATGAGGTCGCATACAAATGACACGCCGTTCAGATGTGATCTTTGCGGCAAGTCCTTCACAAGAAAGGAACACTTCACCAATCACATATTGTGGCACACGGGTGAGACGCCGCACCGATGCGACTTCTGCTCAAAAACTTTCACACGGAAGGAGCACTTGTTGAACCACGTCCGCCAGCACACGGGCGAGTCGCCGCATCGTTGCAACTTCTGCGCCAAGTCGTTTACAAGACGAGAACATTTAGTGAACCACGTTCGGCAACACACCGGCGAAACACCCTTCCAATGTGGATATTGTCCAAAAGCTTTTACTAGGAAGGATCATTTAGttaATCACGTCCGTCAACACACAGGAGAGTCCCCACACAAATGTACATTTTGTACAAAATCTTTTACACGCAAAGAACATTTAACAAATCACGTGCGACAACACACTGGGGAATCACCTCATCGATGTACATACTGCGCTAAATCTTTCACGAGAAAGGAACATCTTACAAATCATATAAGACAACATACAGGCGAGACTCCCCACAAGTGCACGTATTGCCCGCGCGAGTTCTCGCGCAAGGACCACCTGCAGCAGCACGTGCGGCAGCACACGGGGGACGCGCCTCACACCTGCTCCTACTGCAATAAGAGCTTCACGAGGAAAGAGCACCTTGTTACTCACGTCAGACAACACACAGGCGAAACACCTTTCAAATGCACATACTGCTCAAAGTCCTTCTCGCGCAAGGAGCATCTCACTAACCATGTGCATCTTCACACTGGAGAAACACCGCATAAGTGTCCATTCTGTACTAAGACATTCTCTAGGAAGGAACACTTAACTAATCATGTCAGAATACACACAGGCGAATCCCCACACAGATGCgaattttgtaacaaaacatTCACAAGGAAGGAACATTTAACCAATCACTTAAAGCAGCACACAGGAGATACGCCGCATGCATGTAAAATCTGCTCTAAACCATTTACTAGGAAAGAGCATCTAGTAACTCATATGAGATCACATAGTTGTGGAGAAAGACCACATATTTGCGGAGAGTGCGGCAAGTCCTTCCCTCTTAAGGGCAATCTACTATTCCACGAGAGGTCACATAATAAAGGCGCAAATGCGGCAAATAAAACGTTCCGTTGTGATGTTTGCTCCAAAGAGTTCATGTGCAAAAGTAATTTATCATCACATCGAAGAACGCACACGGAAACAGGTGAAGGTACTACAACTACGGAGCCTACTCCTGAGAATGAAGACTGTGGAGATTGCACGAAGTGTGAAAAAGAATCGCCTGAAAGACCGGAGAGGAAACATGACACAAGagcGTCATCAGAAAGTAGGCCAACTGAAGCAACTGCAGCACAAAATCCGTCACCTAACACAAATGCCACTGTCATGCAAATTACTAGCCAGcaaGTCCGAACTGGCCCTACAACAACAACGAGCGTAGCAACAGGCACGTTCACTCACACGGCTACGACTCAACACCACGCGTCTACACAACATCACGCCTCTACAAGTATAGCCCATCATCCTGTTACAGTGAATTACTAA
Protein Sequence: MNPDHHNINTGGGQPPGNSESQNQRVQSTQQQQQTQTNNLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPLPQVSVYGLPTGARIENGKPVQDLGQAHASILNGDPNIILGHTGQPQVTVSAAGQQIPVSQIIANQATQGHDALVGHTQQQETASSSGSLAVAQTQQVPNNRVEFVQHHNIDMGHHSQQHMMQQQLMAAARPEHANQQIQLTVSEDGIVTVVEPGGGKLVEKEELHETIKMPTDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSAADPLLVKDEKNVAKIESAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISAATEHDLQHAMYKVNVEDLSQLLAYHEVFGKLNTENQQQAKVISEVEVEAGTSAGMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSKHGKCHLAGDPAERQAKRLAQDKPYACSTCHKTFSRKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCDLCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCTFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGETPHKCTYCPREFSRKDHLQQHVRQHTGDAPHTCSYCNKSFTRKEHLVTHVRQHTGETPFKCTYCSKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCNKTFTRKEHLTNHLKQHTGDTPHACKICSKPFTRKEHLVTHMRSHSCGERPHICGECGKSFPLKGNLLFHERSHNKGANAANKTFRCDVCSKEFMCKSNLSSHRRTHTETGEGTTTTEPTPENEDCGDCTKCEKESPERPERKHDTRASSESRPTEATAAQNPSPNTNATVMQITSQQVRTGPTTTTSVATGTFTHTATTQHHASTQHHASTSIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01157022;
90% Identity: iTF_00778166;
80% Identity: -