Djun022945.1
Basic Information
- Insect
- Dione juno
- Gene Symbol
- -
- Assembly
- GCA_037127375.1
- Location
- JAXRJS010000101.1:343329-346920[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.023 2.1 9.6 2.6 1 23 67 90 67 90 0.93 2 19 1.2 1.1e+02 4.2 0.0 2 23 117 139 116 139 0.92 3 19 0.044 4 8.7 3.2 2 23 162 183 161 183 0.97 4 19 0.24 21 6.4 1.0 1 17 187 203 187 209 0.86 5 19 0.067 6 8.2 0.9 1 23 214 237 214 237 0.95 6 19 0.83 75 4.7 6.5 1 23 244 267 244 267 0.95 7 19 0.0026 0.23 12.6 1.0 2 23 275 297 274 297 0.96 8 19 0.0017 0.16 13.1 1.8 1 23 303 325 303 325 0.95 9 19 0.00034 0.03 15.4 3.3 1 23 331 354 331 354 0.98 10 19 0.14 13 7.1 0.2 3 23 421 442 419 442 0.93 11 19 0.15 14 7.0 0.7 2 23 468 490 467 490 0.94 12 19 0.068 6.2 8.1 0.4 2 23 513 534 512 534 0.96 13 19 0.0002 0.018 16.1 0.8 3 23 540 560 538 560 0.96 14 19 6.8e-06 0.00061 20.7 0.8 1 23 565 588 565 588 0.98 15 19 1.5 1.3e+02 3.9 0.3 2 23 596 618 595 618 0.84 16 19 0.00011 0.01 16.9 0.6 2 23 626 648 625 648 0.96 17 19 5.1e-06 0.00046 21.1 1.5 1 23 654 676 654 676 0.98 18 19 2e-05 0.0018 19.3 4.1 1 23 682 704 682 704 0.99 19 19 0.00015 0.014 16.5 2.8 1 23 710 733 710 733 0.97
Sequence Information
- Coding Sequence
- ATGTCTAatgGTAAATCCCCTAAAACACGAAAAACATCATTGGACACATCTCAAGAAGACGAGATTGATGCTCTAAATAAAGAAGATATAGTTCCTAAAGCTAGGCAAGGAGAACAATTGGAAAAACATAGGAATAATATAAGGGAAGTTATACTTTGGTCGAATGCTACGCCGATTAGGTGTCGAGGCGGCATTGGCTATGCGTGCTGTTTTTGTTCATGTCAATTTCCTGATCCTGCAGATTTGAAGAAGCACACAATCCAGGATCACGACGACGAAGCGAAGGCAATATTTATGAAAGGGCGGGATATGTACGGATACTTAGTGAAATTGGATATTACAGGATTAGAATGTAATTTATGTGGATCGAAGCTAGAGAATCTGGAGAACATATTGGAACACTTAAAAGATgcgcataataaaaatattagcatagaTATACCTAACCATATATTGCCTTTCAAATttgataaagaatatttaaggtGTTTCAtgtgtcaaaatatatttaacaagttCAAAGCTCTTCAAGAACACATGCACACGCATTATAGAAACTATATTTGCAAAGTTTGCGACGCTGGGTTTGTTAACCGCCATCTTTTATTATGTCACAACGAAGGTCATAAAACTGGGACCTTTGCTTGTGAACAATGCAACCAAGTTTTCGATACAGTAAGGAAGAAGAAATTACACGAAAGAAAAATTCACAATGGTTTAAACACGCCTCATAAATGCGGGTACTGCAGTGAAAGGTTCAGGGAGAATTGTCATAAAAACGAACACTTAGCCAAGGTCCATGGCGTAGTTGGACCAACAATCAAATGCCAAGCATGTGACAAGACATTTACATTGCAGCAGACTTGGTTATTGCACATGAAGAAATATCATTTACTGCAAAGGAAACATGACTGTACAAGTTGCGACATGGCCTTTTTTTCTAAACGGGAACTGACTGACCACATGGTCAAACACACGGGCACGAGAGAATTCAAGTGTCAAGTTTGCAAGAAATCGTACGGACGACTGAAGACCTTGAAAGAACACACGAAGAGGCAGCATCCAGAAGATTGTTTCTACAAATgtATACGAACCATTAAAATCGAAAGGCGTTTAACAACACCGCGAGTCGAGTTGAAGATTATACGTAGCAGGGAGCCAAAACTATCCGACGCCAGGAAAAACCAACAAAATCTTATGACTATTTTGCTATGTTCCAATGCGAACCCAATCCGATCGAAGGATAGTCTTGGATACGGCTGTGCTTTTTGTCTCGAACAATTTCAAAATCCGACCGACCttaaaaaacactttttagTTGAACACAACAACGACAGATTGATTCAGTACATGACGTCTAGATTGTTCGAGCACGTCGTCAAATTAGATATTACCTACTTAAACTGTTCTCTTTGCAGCACAAGTATAGCGAAATTGGAGGATCTGATGCACCACTTGAAAAATGAGCACAAAAAGGAAATCCATACAGACATAAATAACACTATAGTGCCGTTTAAATTTGACACTCCGGAACTCAGATGTGCGATATGTTCCACGGAATATCTTAACTTCAAACTGTTGCAGGAGCATATGAACACCCATTTTGGATATCATTTATGCCCCATGTGTAGCCGAGGTTTTATTACCGAGCGCCTTTTAGCCACCCATATTAGGAGGCACGACAACGGAGTGTACAAGTGTCAAGAGTGCGAGAAAGTGTTTGGGAATAACGAAAGGTTGAAGGAGCATCAGAGGCGGATACATTTAGGGTTCAACAAACGCAACAAATGTATGATCTGTGATGAACGTTTCATGGattactggaggaaggtcgaCCATATGGTCAAAGTGCATGGCGCACCGCCGGTAGTCATAAAGTGCCAAGCTTGCGACCGCACCTTCATTAACCAAAGAGCTCTAGCGCGGCACACTAAAAAGGACCACttaatggaaaaaaaacaCCAATGTGAAGAATGTGATATGAGATTCTTTAGCGCTAGCGGGCTGAAGCGTCATATGGCGAAGCATACAGGACTGCGGGAGTTTAGATGTGATATTTGCTTTAAATGCTACGGCAGGAAGACTACATTAAGGGAACATATGCGTATACACGCTGATGACCGCAGGTTCGCCTGTACTCGATGTGGTCAAGCCTTTGTACAGAAGTGCAGTTGGAAAAGTCACATGAGATCTAAACATGGCGAAGAAATTGTTTAG
- Protein Sequence
- MSNGKSPKTRKTSLDTSQEDEIDALNKEDIVPKARQGEQLEKHRNNIREVILWSNATPIRCRGGIGYACCFCSCQFPDPADLKKHTIQDHDDEAKAIFMKGRDMYGYLVKLDITGLECNLCGSKLENLENILEHLKDAHNKNISIDIPNHILPFKFDKEYLRCFMCQNIFNKFKALQEHMHTHYRNYICKVCDAGFVNRHLLLCHNEGHKTGTFACEQCNQVFDTVRKKKLHERKIHNGLNTPHKCGYCSERFRENCHKNEHLAKVHGVVGPTIKCQACDKTFTLQQTWLLHMKKYHLLQRKHDCTSCDMAFFSKRELTDHMVKHTGTREFKCQVCKKSYGRLKTLKEHTKRQHPEDCFYKCIRTIKIERRLTTPRVELKIIRSREPKLSDARKNQQNLMTILLCSNANPIRSKDSLGYGCAFCLEQFQNPTDLKKHFLVEHNNDRLIQYMTSRLFEHVVKLDITYLNCSLCSTSIAKLEDLMHHLKNEHKKEIHTDINNTIVPFKFDTPELRCAICSTEYLNFKLLQEHMNTHFGYHLCPMCSRGFITERLLATHIRRHDNGVYKCQECEKVFGNNERLKEHQRRIHLGFNKRNKCMICDERFMDYWRKVDHMVKVHGAPPVVIKCQACDRTFINQRALARHTKKDHLMEKKHQCEECDMRFFSASGLKRHMAKHTGLREFRCDICFKCYGRKTTLREHMRIHADDRRFACTRCGQAFVQKCSWKSHMRSKHGEEIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00774667;
- 90% Identity
- iTF_00781216;
- 80% Identity
- -