Djun002434.1
Basic Information
- Insect
- Dione juno
- Gene Symbol
- Paxbp1
- Assembly
- GCA_037127375.1
- Location
- JAXRJS010000008.1:1207331-1214869[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.093 1.3e+03 -0.7 0.0 171 198 469 496 458 501 0.79 2 2 3e-17 4.3e-13 50.1 0.2 7 190 498 663 492 675 0.68
Sequence Information
- Coding Sequence
- ATGTTTCGCAAACCAAGGAAAATCCAAAGGCGTGTGTTTTGCGcggatgatgatgatgacggCGAACCTGAACCACCGCCACCGCCAATTattagtcaaaataaaaaagaaaaacctgTTAAAAGTACTCCAACATTAAGTTTTGCTGATGAagAAGAAGAAGGTGAAGTGTTCAAAGTGAAAAAGTCATCTCAAAGTAAGAGATTGGCAAAACGGCGGgagaaagagaagaagaaaacACCAGAtggtgataataataaatatgacaatcATATTGATGAGgaGAACACTGAAGATGAAAAAGAGAAAGAGTTGCAGCCAAAGAAGAAGGTAACACTAGAAGGGCTGATCCTGTCTGGTCGAGAGGCTTTAGCTGCAGGAGCTAATGATCTATCAGATGAGAGTGACAATGAAGATAACAGGGGTTTCCATACATACCGTGCGGAGTCAGTTCGAGCGGCATTGGTCCCAGGCCACATACCTGATGCTGCACTGATCCACGCAGCACGAAAGACTCGACAGCAGGCACGCGAGCTAGGTGACTTTGTACCTATTCAGGATGGCCCAGGTTCCAGATTGATAAGAGAAGATGATGCAGATGATGATGAAGATGGCAGGATACAGGTTCGAGGGTTGGACTTGCCTAGCGATAAGCCTAAACgtGGCACAGCAGCTATGGCATCAGATGAGGAGATGAACAGCGAGGGAGACGAGTGGGAGGaacaacagataaaaaaagcaGTCCCATCTATAGTAGATATTACAgCTGACACAATAGAACTAAACCCGTTCGCCGTAGCGCCGCCGCCACCCAGGCTGGAGGAATTACCATCTCATCTCCGCCCCCTCACTGCGCCCGGACAGCCTCCATTGACGACCGTGCAGGCGCTCGTCGATGCTTTGAGAGAGAGGTTAACGCAACTGCAAACGGAGCGCAGTGCGACGGCCGCGCGGCGCGAGGCGTGCGCGGCGCGTCTGGCGGCcacggcggcggcgcgcggaCTGCGGCGCGCGCGCACCGCCCGCCTCGACGCCGCGTACCGGCGGGCGCAGGCGGCGCGCGGCTACGTCACCGACCTCATCGAGTGCCTCGACGAGAAGATGCCGGAGCTGGAAGCGTTAGAGGCTCGCGCGCTGGCGCTGCACCGGCGTCGCTGCGACTTCCTGGTGGAGAGGAGGAGGGCGGATGTACGGGACCAGGCGCAGGATGTTCTCTCTATGGCTGCGCGAGCCGGCGCCGCCAAGCCGGTGGAGTCGGAGGAGAAGCGCCAGCGCGCCGCCGAGCGCGAGGGGCGGAGGCGCGCGCGGCGGCTGCGGCGCGAGGCGGCCGGCAGCGGGGCCGCGCACCGGGACGGGGACTCCAGCGACGACGAGCTGCCGCCCGCGCTGGCGCACCAGTGCCGCCAGGAGGCCGAGAGCATCCGCGCGGCGGCGCAGCGCCTGTTCGCGGACGCGCTGGCGGCGTGGCGCGGCGCGCGCGGCGTGTGCGGGCGCCTGGCGCGGCTGCGGCGCCGCCTGCCCGCGCTCTACGCCGACGCGTACCTGGCGCACTGCCTGCCCAAGCTGCTCGCGCCCTACGTGCGCCACGAGttaaTATTATGGAATCCTCTCGCGGACGAAGACAACGAGGACTACGAAAAGATGGACTGGTACAAATGCCTCATGATGTACGGTGAGACAGTGGAAAAGCTATCCAGTGACTCCGACCAATCAGACGACGAGGTTCAACTCCCTCCTCTTACTGAGGAGTCGGTGAGGGAAGACCCGGATCTGATGCTGGTGCCTACTATTATTGATAAGGTTGTCCTACCTAAAGTTGCTGAGCTGGTGGAGCACGCGTGGGACCCGCTCAGCGTGCGCGCCTGCGTGCGACTGCGGCACGTGCTGATGCGCGCCGCCGCGCTGCCCGCCCCGCACCCCGCCGGCCCCCGCGCACTGCGGCGcgtggcggcggcggcgcgcgcgcgccTGGCCTCCGCGCTGGCGGCCGACGTGTTCCTGCCCGCGCTGCCCCCGCACATCCTGGAAGGTCCAGGCGGGTCTTTCTGGAAGCGTTGTCTCGGCGGCGGCGTGCGGCTCCTGCGCGCGGCGCTCGCGCTgtccgcgccgcccgccgtgCTCTACGCCGACCCGCTGGCTTTGTCGTTGATCGAGACCCTGAGCtgcgcggcgggcgcggcgccGGGCCCgcaggcggcggcggcggcggcggcgctggCGGACACGCTGCCGCGCTCCGGCGAGCTGCGGGCGCGCGCGCTGCGCCGCCTCGCACAGCTGGCCCAGCTCGCTCTGACGCGGCTGCAGAGCGACAACGCCATGCACCTgaaAGGTCTAGAACAAGCGAGAGCTGTCCTAGCAGAAGCGCGTGCGGTTGAATGA
- Protein Sequence
- MFRKPRKIQRRVFCADDDDDGEPEPPPPPIISQNKKEKPVKSTPTLSFADEEEEGEVFKVKKSSQSKRLAKRREKEKKKTPDGDNNKYDNHIDEENTEDEKEKELQPKKKVTLEGLILSGREALAAGANDLSDESDNEDNRGFHTYRAESVRAALVPGHIPDAALIHAARKTRQQARELGDFVPIQDGPGSRLIREDDADDDEDGRIQVRGLDLPSDKPKRGTAAMASDEEMNSEGDEWEEQQIKKAVPSIVDITADTIELNPFAVAPPPPRLEELPSHLRPLTAPGQPPLTTVQALVDALRERLTQLQTERSATAARREACAARLAATAAARGLRRARTARLDAAYRRAQAARGYVTDLIECLDEKMPELEALEARALALHRRRCDFLVERRRADVRDQAQDVLSMAARAGAAKPVESEEKRQRAAEREGRRRARRLRREAAGSGAAHRDGDSSDDELPPALAHQCRQEAESIRAAAQRLFADALAAWRGARGVCGRLARLRRRLPALYADAYLAHCLPKLLAPYVRHELILWNPLADEDNEDYEKMDWYKCLMMYGETVEKLSSDSDQSDDEVQLPPLTEESVREDPDLMLVPTIIDKVVLPKVAELVEHAWDPLSVRACVRLRHVLMRAAALPAPHPAGPRALRRVAAAARARLASALAADVFLPALPPHILEGPGGSFWKRCLGGGVRLLRAALALSAPPAVLYADPLALSLIETLSCAAGAAPGPQAAAAAAALADTLPRSGELRARALRRLAQLAQLALTRLQSDNAMHLKGLEQARAVLAEARAVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00779516;
- 90% Identity
- iTF_00458065;
- 80% Identity
- -