Basic Information

Insect: Dioctria rufipes
Gene Symbol: -
Assembly: GCA_963924295.1
Location: OZ002741.1:22828258-22831611[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.011 5.3 10.3 0.8 2 20 186 204 185 206 0.94

2 15 0.0045 2.1 11.5 2.4 2 23 211 233 210 233 0.94

3 15 0.0024 1.1 12.4 1.0 2 23 240 261 239 261 0.96

4 15 2.6e-05 0.012 18.6 1.7 1 23 267 290 267 290 0.96

5 15 0.0036 1.7 11.8 3.7 1 23 295 317 295 317 0.99

6 15 5.7e-06 0.0027 20.6 6.7 1 23 323 345 323 345 0.99

7 15 5.6e-07 0.00026 23.8 2.7 1 23 351 373 351 373 0.96

8 15 2.7e-06 0.0012 21.7 1.4 1 23 379 401 379 401 0.98

9 15 1.5e-08 6.9e-06 28.8 0.7 1 23 407 429 407 429 0.99

10 15 6.2e-05 0.029 17.4 2.2 1 23 435 458 435 458 0.95

11 15 7.7e-05 0.036 17.1 2.3 1 21 486 506 486 508 0.95

12 15 1.2e-05 0.0054 19.7 1.9 1 23 514 537 514 537 0.93

13 15 9e-06 0.0042 20.0 2.8 1 23 543 565 543 565 0.98

14 15 9.7e-06 0.0045 19.9 2.4 1 23 571 593 571 593 0.98

15 15 0.00097 0.45 13.6 0.4 1 23 599 621 599 621 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.011	5.3	10.3	0.8	2	20	186	204	185	206	0.94
2	15	0.0045	2.1	11.5	2.4	2	23	211	233	210	233	0.94
3	15	0.0024	1.1	12.4	1.0	2	23	240	261	239	261	0.96
4	15	2.6e-05	0.012	18.6	1.7	1	23	267	290	267	290	0.96
5	15	0.0036	1.7	11.8	3.7	1	23	295	317	295	317	0.99
6	15	5.7e-06	0.0027	20.6	6.7	1	23	323	345	323	345	0.99
7	15	5.6e-07	0.00026	23.8	2.7	1	23	351	373	351	373	0.96
8	15	2.7e-06	0.0012	21.7	1.4	1	23	379	401	379	401	0.98
9	15	1.5e-08	6.9e-06	28.8	0.7	1	23	407	429	407	429	0.99
10	15	6.2e-05	0.029	17.4	2.2	1	23	435	458	435	458	0.95
11	15	7.7e-05	0.036	17.1	2.3	1	21	486	506	486	508	0.95
12	15	1.2e-05	0.0054	19.7	1.9	1	23	514	537	514	537	0.93
13	15	9e-06	0.0042	20.0	2.8	1	23	543	565	543	565	0.98
14	15	9.7e-06	0.0045	19.9	2.4	1	23	571	593	571	593	0.98
15	15	0.00097	0.45	13.6	0.4	1	23	599	621	599	621	0.97

Sequence Information

Coding Sequence: ATGCTAATACCAGTCTTTGAGGCTGATTTATCATGCAGTTTCGCTCCGATTCAAATTTTCGATGAATTTAATTTCATGAATTTAAAGatAGCACATAACGATGGACTGCCCCAGCAGATCTGCAGTGATTGTATGAGCCGCCTCTCCAACATCAGCTCGTTTAGAAGACAGTGTGAAAAAAGTCAATTAATTCTAACTGCTTACTTCAAGGGAGAAATCATATTAAATGAACCAAGAGTTCAGGAAATTGAAATTGTCCATGTAGATAACGACGGCACCGTATATAAAGTCGAAGATGATGAAGGTTATGAAAATGCTAATGAAAATGCCTCTGAATCGGAACTCTTTACCACATGTTTCTTAGAAATTGATGACAAATCTATGGTCGAAGAAAGGATTGAGTCAGACTGTGAAAGTACACCGCTTGATGAAATTTCCAATGAGGGACTAGTTCTTGGAATTATGGAAAATCTTCCGTCCGATGAAAAATCTCCTCTGCAGGAGCAGAAcgttgaaattaaagaaaataagCCAGCTCCAGTTAAATCTGAGATAATGTGTAACAAATGTCGGATGACATTTAACAATTCTATCAAGTTCGAAAAGCATCTTACATTCTGTGATAGCATGAAGTGTCACGTTTGTAATAAGACACTTATGAATAAGAAAGAGTTACTAGCTCACTTCAAAGAATACCATGCACAAGATGGTCGTTGTGTCTGTCCAATTTGTTATCGCGATTTCGCAAGTGTATCGAACCGCAACTCTCACTTGCAGTCCcataataaattgaattcatttaaaTGCGACATTTGCGATCAAGGATTTAGGAGCAAAGTGTACTTAAGTAAGCACAAAAAATATGTACACACGACAGGCAACTATGAATGTTCGATGTGCCTTCAACGTTTCGAAAATAAAGCCAAATTTCACTATCACATTAGATCGCATAATCCTAACAAGAAATACCAATGTAAATACTGTGATAAATCGTTTATGCAAAAACATCACTTGTCGAATCATGAACGGATACACACCGGGCTGAAACCCTTTTTGTGTAGCATTTGTGGGAAAGGCTTTAAACAGGAATGCAATTTAAAGCTTCATATGCGAACTCACACTGGCGTAAAACCTTACGTTTGTAGTGTTTGTGGGAAAGATTTTGCACAGCGGAGCTCATATGTCATGCACATGCGTCACCATAGCGGCAACCGCCCATATCAATGTGAAGTTTGTGGAAAGAATTTCATACAAAAGTCAACATTAACAGTTCATTTGCGAACGCACACCGGTGAAAGACCATACAAGTGCGATCAATGCGATCGAGCTTTTGTGCAGGCTCATCAACTTAAATATCATAAATATTCCGCCCACAATGGACCTCCTCCGAcaagtagaaaatattttggaacAGGAGCAAATGGAAATGGACAACAGAATAATTCAAATCCTTCCTATAGTTGTCCTTTGTGCTCAAAAACTTTCAAGATACCTTCCTCTCTGACGACCCACATTAAGTGTCACTCAGAAGAACGAAAGCACATGTGTACATATTGTGGGAACTCCTTTAAACGTGCCGAGCATCTAAAAATTCACATAAGTGGGGTTCACTTGAAACAAAAGCCCTACGCTTGTGATTACTGTAATAAAACTTTTTCACAATGCGGCGATCGAAACATTCATATGAGGAGTCACACTcAGGACAAGCCGTATAATTGCCCCCACTGCAAAAAAGGATTTAAATTGCAAAAATCTCTTCGTGCCCATGAACGGATTCATACCGGTGAAAAACCATTTGCCTGTAAAGTATGCCAGAAGGATTTTATGACATACAATGCCCTTGCAATTCACACAATGAAACATTCAGATGACAAAAATAAAGAACTTACGGACAGAACTCTTGCCGAAATACAGAATGCTCTAGTCTCAACTGGGGCTATCTTACCACAGGAAATGTTACAAACTGGTAATGTTTCATCAGCAGCAACTGCAGCATTACAAAAAACTCAATTTCTCGAGTATAATATAGAAGATACATGTGAAAACCAAGATAGTATCGCTAGTGAATGCGTCGAAATGTGA
Protein Sequence: MLIPVFEADLSCSFAPIQIFDEFNFMNLKIAHNDGLPQQICSDCMSRLSNISSFRRQCEKSQLILTAYFKGEIILNEPRVQEIEIVHVDNDGTVYKVEDDEGYENANENASESELFTTCFLEIDDKSMVEERIESDCESTPLDEISNEGLVLGIMENLPSDEKSPLQEQNVEIKENKPAPVKSEIMCNKCRMTFNNSIKFEKHLTFCDSMKCHVCNKTLMNKKELLAHFKEYHAQDGRCVCPICYRDFASVSNRNSHLQSHNKLNSFKCDICDQGFRSKVYLSKHKKYVHTTGNYECSMCLQRFENKAKFHYHIRSHNPNKKYQCKYCDKSFMQKHHLSNHERIHTGLKPFLCSICGKGFKQECNLKLHMRTHTGVKPYVCSVCGKDFAQRSSYVMHMRHHSGNRPYQCEVCGKNFIQKSTLTVHLRTHTGERPYKCDQCDRAFVQAHQLKYHKYSAHNGPPPTSRKYFGTGANGNGQQNNSNPSYSCPLCSKTFKIPSSLTTHIKCHSEERKHMCTYCGNSFKRAEHLKIHISGVHLKQKPYACDYCNKTFSQCGDRNIHMRSHTQDKPYNCPHCKKGFKLQKSLRAHERIHTGEKPFACKVCQKDFMTYNALAIHTMKHSDDKNKELTDRTLAEIQNALVSTGAILPQEMLQTGNVSSAATAALQKTQFLEYNIEDTCENQDSIASECVEM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00453966; iTF_00453965;
90% Identity: iTF_00453966; iTF_00453965;
80% Identity: -