Dcoc010967.1


Basic Information
Transcription Factor Domain
Sequence Information
Similar Transcription Factors

Basic Information

Insect
Dinocampus coccinellae
Gene Symbol
Hr39_2
Assembly
GCA_963920625.1
Location
OY987189.1:7511212-7514913[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.048 1.8e+02 1.0 11.4 125 198 38 110 9 131 0.56
2 5 2.1 7.6e+03 -4.3 25.7 44 163 316 436 295 454 0.52
3 5 4 1.5e+04 -5.8 6.9 71 129 472 536 443 559 0.58
4 5 7.7e-08 0.00028 20.1 0.0 1 21 641 661 641 672 0.93
5 5 2.6e-70 9.5e-67 225.9 0.1 195 408 790 998 681 998 0.89

Sequence Information

Coding Sequence
ATGTCAGAGCATAACGGGCCCACGGAGGGCCCGGGCTGGTGGACACCAACAGCACAATTATGgaaatcatcatcaacatcatcatcatcatcatcatcatcgtcatcatcatcaactacaacaacaacaacaacaacaacaacaatagcAACAGCAACtgcaccaacaacaacaacaacatcatcatcatcatccaataatacaattacaaCATCATCAACGACAAATGCAAATAGCACAAATACAactatcatcaataataacaacaaccacaataataataataataataataataataataataataataataataataataataataataataataatgcatcaacatcaacatcgaTACGTAGTGGTGAAACGGGAAAAAATGTTTCTGTAACGACAATAAATGTTCCACCACTGTCTGACATGCACGatgGTAAAAGTGTGAAATATTTGGGTGGTCAAAATGGTGTGACTGTATCAGTAGTGTCATCATGCGGTAGCAGTCCAAGTCCTGGTTTTATTggtcatgaaataaattccatTGATGATCTTGAGGATAGCGATGGTGAAGTGAGCAAAATTGATTTTCGTGGTGTTAATTTACGAAGTAAAAAGAAACGTGATGGTGATAATAGTGAATCATCGACGTGTTTCGATGATACTACACATCATCAACAGCCCGAGCGTCCAATGTCGTGGGAAGGTGAATTATCAGATCAAGAAATGTCTTCCAATACAATTACTAATCAAGATCATGAAGAAACGTCAATGGAAGGTGTACAAGTTTGTGGCGCGAGTCCAGGATCGCAAGAGcaaaaatttccaattaaaCCTGAGCCGGATTTTCGATCGAGTCCCGGAATAGGAATTAATTCTCATGTGGATTCAACAATGTCAATACACACGCAACAACATttacaacatcaacatcaccaTCAGCAGCAAcaccatcaacaacaacatcaacaacaacaacaacatcatcatcatcatcaacatcaacatcaacatcatcatcaacatcaacatcagcatcaacatcaacatcaacatcaacatcaacagcaacaaaaTCATCCTCAACAACGTGAACTTGAGCAAAATCAACCGAGTGATTTACCATTATTAGTTGGCAAACTTCTTGGTGGATACAATAATTCAACGCCCAATCACAGTCCCGTCCTAAATCCACGTCATCATTTGACAAAACACAGTCACACAAGGTCACAAGTGCCGTCACCCGATTCCGCAATTCATTCGGCCTACAGTGTTTTTTCATCGCCAACGCAGAGTCCACACGCGGCCCGACACTCAGCACTTGGTGCTGGCAGTCCtgtaccatcatcatcactctCACTATCACGTCACAGTTTCAATAATTCtacttcatcattatcactgTCGCTGTCACATTCTTTATCGCGAAATAATTCTGACGCGTCAAGCAGTTGTTACAGCTACGGTTCACTGAGTCCGCCCACACATTCACCCGTACAACAACCACGTCACGCCCATCCTCAACACCATCATCAAATACCGCAGGGGAGTCCCTTACACCTGCCAACAACATCAACTAATAATGCCCACCATCATTATTCAAatgtttcaaatgaaattggCTCCGAGGGACACTCTGAGGATCCCGAGGATTGTAAAATACCTTCTGCACCAGCGGGCATTTCTACACGACAACAGTTAATTAACAGTCCGTGTCCAATATGCGGTGATAAAATAAGTGGTTTTCACTATGGAATATTTTCGTGTGAATCGTGTAAAGGTTTTTTCAAACGTACGGTTCAAAATCGTAAAAATTATGTTTGTCTAAGGGGCGCTGGTTGCCCAGTCACTGTTGCAACACGAAAAAAATGTCCGGCTTGTCGTTTTGATAAGTGTCTAAATATGGGAATGAAATTGGAGGCAATACGAGAAGATAGAACACGCGGTGGTAGAAGTACGTATCAGTGTACGTATACTCTACCAGCAAATTTAATTGGTAGTCCAGCTGGAAGTGTTGCCGGTGATAAAATGACTGGTGGAACGTGTAGTCCCGCACCACCTGGCTCTGAACATCATCATTCTGCGCGCCATCATTGGAATCATAAAGTTCAAGTTGTGCCACAATTACTTCAAGACATTATGGATGTAGAGCATCTTTGGcattacaatgataatgatcGCGTTAGTCAGGGCAGTAATGGACCAACGAATATGGATCCGTGTGGTTTGGGTTTGAGTGGTGAAGGAAGTAGCAATGGAAATATTGACAATAGACGAGATCAATCATCCAGACCAAATTCAACTGGTCCACCGTCAAATACAAATCATGAACAATCACCATCGATAAATCCAACATcggtaaataattcaaatccaAATCCAAATGGTAATTCATCACAACATCCGGATTTCCTATCGAATTTGTGCAATATTGCGGATCATCgactttataaaattgtcaagTGGTGCAAGAGTTTgccattatttaaaaatatatcaattgacgatcaaatatgtttattaattaattcatggtgcgaattacttttattttcatgctgTTTTCGTAGTATGAGTACACCAGGTGAAATTCGTGTATCACTTGGTAAATCAATTACACTTGAACAAGCACGACAACTTGGATTGGCAACGTGTATTGAACGTATGCTtgcatttacaaataatttacgaCGATTACGAGTTGatcaatatgaatatgttGCCATGAAAGTAATTGTACTATTGACATCGGATACAAGTGAATTAAAAGAGCCAGAAAAAGTACGTGCATCACAAGAAAAAGCACTTCAGGCATTGCAACAATATACAATTGCCAGGTATCCAGAAATGCCAGCTAAATTTGGTGAATTACTTTTGCGAATACCCGATTTGCAACGAACGTGTCAGGCTGGTAAAGAATTGCTCAGTCAAAAGCGCGCAGAAGGCGAAGGCAGCTCATTTAATCTTCTCATGGAACTTTTACGTGGCGATCACTGA
Protein Sequence
MSEHNGPTEGPGWWTPTAQLWKSSSTSSSSSSSSSSSSTTTTTTTTTTIATATAPTTTTTSSSSSNNTITTSSTTNANSTNTTIINNNNNHNNNNNNNNNNNNNNNNNNNNNNNASTSTSIRSGETGKNVSVTTINVPPLSDMHDGKSVKYLGGQNGVTVSVVSSCGSSPSPGFIGHEINSIDDLEDSDGEVSKIDFRGVNLRSKKKRDGDNSESSTCFDDTTHHQQPERPMSWEGELSDQEMSSNTITNQDHEETSMEGVQVCGASPGSQEQKFPIKPEPDFRSSPGIGINSHVDSTMSIHTQQHLQHQHHHQQQHHQQQHQQQQQHHHHHQHQHQHHHQHQHQHQHQHQHQHQQQQNHPQQRELEQNQPSDLPLLVGKLLGGYNNSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHAHPQHHHQIPQGSPLHLPTTSTNNAHHHYSNVSNEIGSEGHSEDPEDCKIPSAPAGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLIGSPAGSVAGDKMTGGTCSPAPPGSEHHHSARHHWNHKVQVVPQLLQDIMDVEHLWHYNDNDRVSQGSNGPTNMDPCGLGLSGEGSSNGNIDNRRDQSSRPNSTGPPSNTNHEQSPSINPTSVNNSNPNPNGNSSQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSQKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01002113;
90% Identity
iTF_00452002;
80% Identity
iTF_00452002;