Dcae000797.1
Basic Information
- Insect
- Diloba caeruleocephala
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_947459985.1
- Location
- OX381608.1:3058465-3084440[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-79 2.4e-75 254.2 19.2 1 298 123 416 123 418 0.92 2 2 2 2.6e+04 -6.1 17.5 1 48 414 460 414 488 0.73
Sequence Information
- Coding Sequence
- ATGGGGCATCGCTCTGAAGTAGTCACGCCTGACAATAGCGATGAGGAGAGCGGAGAAGCCTTCACTGACGGTGATTTTGGCGATTCCGATGACGAAACTATCGTCGAACGCACCGATGAGGCTACACCTTCACACGTGCCCATCAATGAAACTGTGAATAAAGATATTCAGAAGAATGCAGTAACAAATGGTCAATCTAATGTGGATAATGTAGTGGAGCAGCCCAGACTTAATGGTCATAAAAATAGTGAGAATCATACAAGTGATGTAGAAAACCAAAGCTTTGTATTAACGGATTTGCGCAGAGATTCACACGGTGATCAGAATCCCTCAATAGTGGGCATTCTTGGAGACCAGCAAAATCATGCGGAGCAGCGACTAGCCGCTCGTCGCGCGGCACGGGCCGAAGCGCGCGAGATACGCATGCGCGAGCTGGAAAGGCAGCAGCGCGAACAAGAGGACCATGCCGACAAAGCGTACGATATGTATGCGGGTAAGACGCCAGAGGCGGTGGGTCGTCGCGGTGGCACTCGGCTGGCGGCGCTTAGCCCGGCCGGTGTACATTCGCCGCGACGCAGCTCTGAAGATTCCACCGATGATACCTTCAGCATCAAGGACCTTAGGCACGATTTGAAAGAGGTCGAAGAGAAGTTCCGTAAGGCCATGATCCTGAATGCGCAGCTGGACAACGACAAGGCGGCGCTTGGATATCAGTTAGAACTGCTCAAGGACAGGATAGAGGAGTTGCAAGAGGAATACTCTCAGTTGCAGCGCGAGCACAAAGAGAAGTGCTCATCGTTCGAACGCCTGAAGCGCGAGCACGAGTCGGTGTCGCGCGAGCTGGGTGCGGCGCGAGATGCTGTGCGGGCGCGCGACGCTGCTGCGGGTGCGGCCGGCTTCGCGTTCGTGGACGCGGCGGCTCTGGGTGCGCCCGCGCTCGGCCAGCCCGAGTGCGGCGAGCCCGTGGGCCGCGTGCCGGCGCTGGCGCTCGTGAGCCACTCCGCCGAGCAGCTGCTCAATGACGCCGGCGAGGGCACGCTCGATGTGCGGTTGCAAAAACTTCTGAGCTCGAAGCAGGCGTTAGAATCAGATGTACGTAAACTGAAGCTACAGCTGAACGAGGAGCGAGCTGCTAGACAGAATGGAGTCACCAACCACCACGAGCTCGAATACGAAAACGAACTGGAGACGGTTCGCAAGTCAGTCTCCGAGGCGAAGGCGCGAGCTGCCCGTGCCGAGGCCGAGGCGGCGCTGCAGGCCGCGCACGTGGCCAGGCTCGAAGCGCAGCTCGCGAGGCTGCGGGCCCGGCAGGACCACCAGGAAGAGCACGAGGAGCAGCTCAAGCAGGAGCGGCGCCGCTTGCAGAGAGAAGCTCGAGAAGCGCTCAACCGGGTCGAAGAGTTGGAGACTGAGAACAACCACCTCACGAAACGACTAGACAAACTCAAGAACGCGAAGTCCGCACTACTGAAGGACCTGTGA
- Protein Sequence
- MGHRSEVVTPDNSDEESGEAFTDGDFGDSDDETIVERTDEATPSHVPINETVNKDIQKNAVTNGQSNVDNVVEQPRLNGHKNSENHTSDVENQSFVLTDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPEAVGRRGGTRLAALSPAGVHSPRRSSEDSTDDTFSIKDLRHDLKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYSQLQREHKEKCSSFERLKREHESVSRELGAARDAVRARDAAAGAAGFAFVDAAALGAPALGQPECGEPVGRVPALALVSHSAEQLLNDAGEGTLDVRLQKLLSSKQALESDVRKLKLQLNEERAARQNGVTNHHELEYENELETVRKSVSEAKARAARAEAEAALQAAHVARLEAQLARLRARQDHQEEHEEQLKQERRRLQREAREALNRVEELETENNHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- -
- 80% Identity
- -