Basic Information

Insect: Diarsia dahlii
Gene Symbol: Znf296_1
Assembly: GCA_949775195.1
Location: OX459189.1:13633498-13647147[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.3 1.7e+02 4.4 0.8 1 21 156 176 156 177 0.93

2 14 0.00049 0.062 15.2 0.6 2 20 190 208 189 212 0.95

3 14 0.019 2.4 10.2 0.5 2 23 252 273 251 273 0.96

4 14 0.49 62 5.7 0.8 2 21 280 299 279 300 0.93

5 14 8.6 1.1e+03 1.8 0.3 2 23 350 372 349 372 0.88

6 14 0.011 1.4 10.9 0.3 1 20 377 396 377 398 0.92

7 14 4e-05 0.0051 18.6 0.8 1 23 406 429 406 429 0.98

8 14 7.8e-05 0.0099 17.7 5.3 1 23 450 472 450 472 0.99

9 14 6.7e-06 0.00084 21.0 3.8 1 23 477 499 477 499 0.99

10 14 1.4e-07 1.7e-05 26.3 2.3 3 23 513 533 511 533 0.96

11 14 3.2e-05 0.004 18.9 3.2 1 23 539 561 539 561 0.99

12 14 2.8e-06 0.00035 22.2 2.6 2 23 568 589 567 589 0.96

13 14 1.6e-07 2.1e-05 26.1 1.4 1 23 595 617 595 617 0.99

14 14 0.0039 0.49 12.3 0.1 1 23 623 645 623 645 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.3	1.7e+02	4.4	0.8	1	21	156	176	156	177	0.93
2	14	0.00049	0.062	15.2	0.6	2	20	190	208	189	212	0.95
3	14	0.019	2.4	10.2	0.5	2	23	252	273	251	273	0.96
4	14	0.49	62	5.7	0.8	2	21	280	299	279	300	0.93
5	14	8.6	1.1e+03	1.8	0.3	2	23	350	372	349	372	0.88
6	14	0.011	1.4	10.9	0.3	1	20	377	396	377	398	0.92
7	14	4e-05	0.0051	18.6	0.8	1	23	406	429	406	429	0.98
8	14	7.8e-05	0.0099	17.7	5.3	1	23	450	472	450	472	0.99
9	14	6.7e-06	0.00084	21.0	3.8	1	23	477	499	477	499	0.99
10	14	1.4e-07	1.7e-05	26.3	2.3	3	23	513	533	511	533	0.96
11	14	3.2e-05	0.004	18.9	3.2	1	23	539	561	539	561	0.99
12	14	2.8e-06	0.00035	22.2	2.6	2	23	568	589	567	589	0.96
13	14	1.6e-07	2.1e-05	26.1	1.4	1	23	595	617	595	617	0.99
14	14	0.0039	0.49	12.3	0.1	1	23	623	645	623	645	0.97

Sequence Information

Coding Sequence: ATGGCTTCTACTCTGGAAACcgatattaaaatagaagattTGTGTAGAACATGTTTGTCGAAAGATAATGAACTATTCTCGATGTTTGATGTATTTCTTGACTCCACAATTACTTTAGATTACATGGTAACTGCAACGACTGGGTTGAagATAAGCAAAAATGATGGTTTGCCTTCAACGATTTGCTGCGAGTGTAAAGAAAAAGCATCAAAGGCATTTGAGTTTAAGAAAAAATCGGAAGAAGCTAATATGACCCTTAGAGGAGGGATATTATTAAAAaaggaaaagaaagaaaactcaATGCCAATGAAAAATTTAAGTCAAATTAATACATCAGATGTGAAGACTGAAGATTTTTCATCACATGACAATGATGACAATGCCGATAGTGATTTCCATGATCCAGATTTACATGAACAAGATGATGTTAAAATGGAGCATGTGAGCTTGGAACGCAAGTCCTGTTTTGTATGCAAAAGTTGCTTGGTCGCTTTTGATACATACTGTAAATTGCAAGAACATGAGAAGATATGCATAAAAGTCGAGTGTGATGAAACCAACCGCACTTACTGCCCACTTTGCGGTACATGCTACAATGGTGCAGAAAACTTGACGAAACATATGTGGGAAAATCATGCAGACCTTATGGGACCAAAGAAGAGAGGCAGACCCAAGAAGATGTTGACCAGTACCATTCTTAACAAGTTATCAGAAAATGGATTTTGCATAACATCAATGCCAGCTAAAAAGATTGAGTGTGCATTTTGCAAGCAACATTTTGAAACCAAAGAAGAATTAGGATCACATGCAATAACTCACAAAGAATCGAAAGTGCTGCGTTGTGTACTGTGCAAGAAAATATACATTGATAAGATAATGTTTGATCACCATATCTGCATAGAAGAGAAAACTGATGTAAACAATATAGACAATGATTCGACTAAAACAGACACTACTGCAAAGAGGCCTCAAAATTTACAATCCGAAATAACACTGCGAGAAATTCTAGACCCGAACGTGGATATTGAGCAAATCAACTTGCTTGTTGTATGTAGTACTTGTAGCTGCATATTGCAATCAGAAACAGATCTCATTAGCCACCGCGATGCTGAGCATCCGGAACTGTCTCACCGATGCAACCTCTGCACGaagGTTTTTGCTTCATTGCGCTCAGCGGCTCGTCACAGAAGCATTTGTAAGgaaatagaaagaaaatataaatgtaaCACGTGTGGACTGAAATTCGCTTATGAAATATCTTTGAATAAGCATATTCTACGATACCATGAGGGACAAAGCGTGTCGGTTAAATTTATTGATTCTAAAAGCAAAAGAGAAGAGAGACAATTTCAGTGCGATACTTGCAATAGGACTTTCTGCAAgAGAGAGCTACTCGTTAAACATACTAAAACACACATCGACAGTTTCTTCCAATGTGATGTTTGTGAAAAGAAGTTTCACAGGAGCGACAATCTCCGCTCTCACAAACGAGTTCATCAGTCGCAGCGCGAAAAGATTTCATCTAGTAACTGCTTATGCCTTTACTGTGGCCGCAGCTTCTCTAATTCGTCGAACTTAATCGTGCACATGCGACGCCACACCGGAGAGAAGCCCTACAAGTGTGATTTTTGTGGCAAAGGTTTTCCAAGATCTTCCGATCTTCAGTGTCACAGAAGATCTCACACTGGCGAGAAACCTTGCATATGCCGCGTTTGTGGTAaagGTTTTTCGCGCAGCAATAAGCTGTCCCGACACATGCGCGTGCACACCGGCCAGCGACCGTACAAGTGCACGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCAACCTGCACATCCGCCGACACACCGGCGACCGGCCCTACATCTGCGAAGTGTGCGGCGATAGATTTATACAGGGTACAGCATTGCAGAATCACCGAAGAGCTCATGGTCACTTTCCTATTCCTACCACAGAGGCTCCTTCCGTACTGCAAGCACAGGCTTTTACAGTCCAGAGTATAAACCTTAATAATAGTCACTAA
Protein Sequence: MASTLETDIKIEDLCRTCLSKDNELFSMFDVFLDSTITLDYMVTATTGLKISKNDGLPSTICCECKEKASKAFEFKKKSEEANMTLRGGILLKKEKKENSMPMKNLSQINTSDVKTEDFSSHDNDDNADSDFHDPDLHEQDDVKMEHVSLERKSCFVCKSCLVAFDTYCKLQEHEKICIKVECDETNRTYCPLCGTCYNGAENLTKHMWENHADLMGPKKRGRPKKMLTSTILNKLSENGFCITSMPAKKIECAFCKQHFETKEELGSHAITHKESKVLRCVLCKKIYIDKIMFDHHICIEEKTDVNNIDNDSTKTDTTAKRPQNLQSEITLREILDPNVDIEQINLLVVCSTCSCILQSETDLISHRDAEHPELSHRCNLCTKVFASLRSAARHRSICKEIERKYKCNTCGLKFAYEISLNKHILRYHEGQSVSVKFIDSKSKREERQFQCDTCNRTFCKRELLVKHTKTHIDSFFQCDVCEKKFHRSDNLRSHKRVHQSQREKISSSNCLCLYCGRSFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCICRVCGKGFSRSNKLSRHMRVHTGQRPYKCTYCEKAFSQSNDLNLHIRRHTGDRPYICEVCGDRFIQGTALQNHRRAHGHFPIPTTEAPSVLQAQAFTVQSINLNNSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00072259;
90% Identity: iTF_00447477; iTF_00445437; iTF_01063058; iTF_01063976; iTF_01084489; iTF_01062091; iTF_00302382; iTF_01064888; iTF_00685692; iTF_01533280; iTF_00712183; iTF_00928923; iTF_01532351;
80% Identity: -