Ddah031228.1
Basic Information
- Insect
- Diarsia dahlii
- Gene Symbol
- retn
- Assembly
- GCA_949775195.1
- Location
- OX459208.1:14234780-14248249[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-20 1.1e-16 62.4 0.0 12 89 86 161 81 161 0.95 2 2 4.8 2.3e+04 -2.8 0.0 25 38 288 301 251 303 0.55
Sequence Information
- Coding Sequence
- ATGATATTTTACGATAGCCGTAAGCGACAAAACGAGAGTCATAAAAGAGACGATGTAGTAGATATGGCGAATATTTGCGGTACCTGCACAATAGCTGCCAAGTCTGTTCGGTGTAGGACTTGTGCAGTGCTGGGCCGGGGTGATGCTGGTGCGCGGGGCGATGGCTGCCACAATGTTGCACCGGATAGGGCCGGCCGCTGTTTTAATGTCTCTCAGACGGAATTACGCTGGATTGTTCTCAACTTTACTGCTCCCTTCATGATTGATCGTTGCACTCCAATCAACCGGCTACCAATAATGGCGAAGTCGGTGCTGGACCTGTACGAGCTGTACAACCTGGTGATAGCCCGCGGTGGGCTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATTATCAAGGGGCTGCGGCTGCCATCGTCTATCACGTCTGCTGCCTTCACGTTACGCACACAGTATATGAAATACCTGTATGATTACGAATGTGAGAAGAAGAACCTATCAACCAGGAGTGAGCTGGATGCAGCTATTGAAGGCAACAAGCGTGAGGGTCGCCGCGCCTCGGGACAGTACGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGCTGTCGCTGTCGCTGGGGGGCGTGGCCCCGCGCCtgccgccgctgccgccgcaCGCGCCGCATCTAGCGCAGCATGACATCGAGTATAGGGTGCGCGAGTACATGAAGATGATACAGCAACAGAGGGAACTCATGAGAAATGGCTCCGAATCACCCCCCAGCAACGGCCAAGCGCCAATAATGTCACCCCGCGACGCCGCCCTTAGTGCCATCGACGTCTCCCGCCTCACCCTCTGGTCGCTttacaacaataacaacaacaacagcccACAACCAGACCTTGAGCCACAACGCGAGGCTCTGAATCTGAGCGAGAGCCCCAACTCGATCACAAGCGGAGGCAAGCGCGAGGCATGCCGGTCCCCTGCGCCGCCCGCTAAGCGCCGCACACCGCGGCCCATCTCCCGCCCCGCCTCGCCCCGCGACCACCTGCACTCGCCGCCACAGCATCGCCACAGCCGCAGGGACACCACGTCACCGCCACAGATCAACGGCATGCCCAATTCAAATGGTGTCAATGGAGCTGCCTTCAAGATTACCACCAGAGGAGACGCAAGCACAGGAGACCAGCAACTAGTAGTGTCAATAGAGCTGAACGGAGTAACGTATGAAGGAGTACTCTTCCCCTCAGGCAACGGTCAGAACGGACACAGACAAATGGTGTCCTAA
- Protein Sequence
- MIFYDSRKRQNESHKRDDVVDMANICGTCTIAAKSVRCRTCAVLGRGDAGARGDGCHNVAPDRAGRCFNVSQTELRWIVLNFTAPFMIDRCTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGQAPIMSPRDAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSITSGGKREACRSPAPPAKRRTPRPISRPASPRDHLHSPPQHRHSRRDTTSPPQINGMPNSNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -