Dbru024230.1
Basic Information
- Insect
- Diarsia brunnea
- Gene Symbol
- retn
- Assembly
- GCA_949774965.1
- Location
- OX459015.1:12101366-12113359[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.7e-20 3e-16 60.6 0.0 13 89 63 137 57 137 0.94 2 2 5 1.5e+04 -2.6 0.0 25 38 264 277 226 279 0.54
Sequence Information
- Coding Sequence
- ATGACTGCAACGAGTGCAGTGATTGTGCAGTGTGTAGTGTGCAGTGATTGCGCCGCGCGCTGCCGGGGTGATGGTGGTGTGCGGGGCGATGTCTGCCACATTGTTGCACCGGATAGGGCCGGCCGCTGTTTTAATGTCTCTCAGACGGAATTACGCTGGATTGTTCTCAACTTTACTGCTCCCCTCATGATTGATCGTTGCACTCCAATCAACCGGCTACCAATAATGGCGAAGTCGGTGCTGGACCTGTACGAGCTGTACAACCTGGTGATAGCCCGCGGTGGGCTGGTGGAAGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAAGGTCTACGGCTGCCGTCGTCCATCACCTCTGCTGCCTTCACGTTACGCACACAATACATGAAGTACTTGTATGACTACGAGTGCGAGAAGAAGAACCTATCAACCAGGAGTGAGCTGGATGCAGCTATTGAAGGCAACAAGCGTGAGGGTCGCCGCGCCTCGGGACAGTACGATGCACAAGCTGCTTTAGCTATGCCCCCACTAAATCGCGTGCCCGCGTCTCTCGCGCAGCTCTCGCAGCACATGCAGCCGCTGTCGCTGTCGCTTGGGGGCGTGGCCCCGCGCCTGCCGCCACtgccgccgcacgcgccgcatcTAGCGCAGCATGACATCGAGTACAGAGTGCGCGAGTACATGAAGATGATACAGCAGCAGAGGGAGCTCATGAGAAATGgCTCCGAATCACCCCCCAGCAACGGCCAAGCGCCAATAATGTCACCTCGTGACGCCGCCCTCAGTGCCATCGACGTCTCCCGCCTCACCCTCTGGTCGCTctacaacaataacaacaacaacagcccGCAACCGGACCTTGAGCCACAACGCGAGGCTCTGAATCTGAGCGAGAGCCCCAACTCGCTGACAAGCGGTGGCAAGCGTGAGGCATGCCGCTCCCCCGCGCCGCCCGCTAAGCGCCGCACGCCGCGTCCCATCTCCCGCCCCGCCTCGCCCCGCGACCACCTACACTCGCCGCCACAGCACCGCCACAGCCGCAGGGACACCACGTCACCGCCACAGATCAATGGCATGCCCAACACTAATGGTGTCAATGGGGCTGCCTTCAAGATTACCACCAGAGGAGACGCAAGCACAGGAGACCAACAACTAGTAGTGTCAATAGAGCTGAACGGAGTAACGTATGAAGGAGTACTCTTCCCCTCGGGCAACGGTCAGAACGGACACAGACAAATGGTGTCctaa
- Protein Sequence
- MTATSAVIVQCVVCSDCAARCRGDGGVRGDVCHIVAPDRAGRCFNVSQTELRWIVLNFTAPLMIDRCTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGQAPIMSPRDAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSLTSGGKREACRSPAPPAKRRTPRPISRPASPRDHLHSPPQHRHSRRDTTSPPQINGMPNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -