Dfer033640.1
Basic Information
- Insect
- Diadocidia ferruginosa
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_027564275.1
- Location
- JANSTW010072451.1:1-2464[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-06 0.037 14.1 10.3 1 34 32 65 32 76 0.85 2 2 7.2e-38 1.2e-33 117.6 19.3 74 299 65 289 59 290 0.86
Sequence Information
- Coding Sequence
- ATGAGTTTTTACTCGTCGTCAGTGGGGCACAGAAGACGTGCACCGGCGGGACATTTGGATGAAGAGCATGTGCTTGACCGAATAAGCAGAGATGCTGAAGAACGACATTTGAAAAAAAGACAGGCGCGAGAAGAAGCTCGACAAATTCGATTAGAAAAATTAGAACGACAGATTCGAGCCAACGATGACTCTGATTCACATACACTTTTAGACGACGATAATAATGCCGAAAAAGTGACTGAATTGGAGAATAAATTTCAACGTGCTATGCTTTTGTACTCACAATTAGATAATGAAAAGTCAGCTTTGCTGTATGAAATTGATTTACTAAAAGATGAATTGGAAGAAAAAGATCAAATTGTTTATCAGGTTGAACGAGAAAATCGTGATCTTACAAGTGAAGTAAAACTGCTGAAAAGGACGCTTGATGGGTTGCAAACTTTACAGCAATGTTTAAAGGCCGAAATTGCTCAAAGAGATCAATTAATACAAGAAAATGGTTTTGTGCTTGCTAAAATGGAACCGCCTGATGAGATGTTTCAAATTTCCAGCGATAGCAGTGGTTCAGCTATAAATCAAAGACTAAGTCCAATTCTTTTTTCGCAACAAACATTGTCCTTAGTTGAAAAAACAATTCCAGGATCTTTTTCTATTAATGAAAAGATTCGCAAATTGGTCGATATGAATAAAAAAATGCGTCAACAGGTTGAAGAAGCTGAAAAAACGTTATATGCAAGAAGACAACGAGCTAATGAATCTCATACAATTACAGTAAATGGGAATACAAATGATGAGGCACAACGAGATGCGACAAAACAACTTGCCGAGCTAAAACTTAAACTTCAAGAAGTAGAACGTGAGAACACCGCCCAACAAGGAAAT
- Protein Sequence
- MSFYSSSVGHRRRAPAGHLDEEHVLDRISRDAEERHLKKRQAREEARQIRLEKLERQIRANDDSDSHTLLDDDNNAEKVTELENKFQRAMLLYSQLDNEKSALLYEIDLLKDELEEKDQIVYQVERENRDLTSEVKLLKRTLDGLQTLQQCLKAEIAQRDQLIQENGFVLAKMEPPDEMFQISSDSSGSAINQRLSPILFSQQTLSLVEKTIPGSFSINEKIRKLVDMNKKMRQQVEEAEKTLYARRQRANESHTITVNGNTNDEAQRDATKQLAELKLKLQEVERENTAQQGN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00560261;
- 90% Identity
- -
- 80% Identity
- -