Basic Information

Insect: Diachasma alloeum
Gene Symbol: L
Assembly: GCA_001412515.3
Location: NW:36464-110057[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.00024 0.018 14.9 4.0 1 23 96 118 96 118 0.98

2 19 0.24 18 5.4 3.9 1 23 124 146 124 146 0.97

3 19 3.3e-05 0.0025 17.6 3.4 1 23 152 174 152 174 0.98

4 19 3.6e-05 0.0028 17.5 0.9 1 23 180 202 180 202 0.98

5 19 0.0013 0.097 12.6 0.5 2 23 241 263 240 263 0.96

6 19 0.017 1.3 9.0 0.6 2 23 296 318 295 318 0.93

7 19 1.4 1.1e+02 3.0 0.6 2 20 326 344 325 348 0.81

8 19 0.074 5.6 7.0 0.1 3 23 382 402 381 402 0.97

9 19 0.027 2.1 8.4 0.3 2 23 414 435 413 435 0.97

10 19 0.0025 0.19 11.7 0.1 1 23 444 467 444 467 0.93

11 19 6 4.5e+02 1.0 0.2 1 19 472 490 472 495 0.76

12 19 2.9 2.2e+02 2.0 0.0 10 23 518 532 518 532 0.95

13 19 0.11 8.4 6.5 6.2 1 23 553 575 553 575 0.98

14 19 0.0016 0.12 12.3 0.0 1 23 580 603 580 603 0.95

15 19 0.14 10 6.2 0.4 2 23 649 672 648 672 0.89

16 19 0.00019 0.014 15.2 0.6 1 23 686 708 686 709 0.96

17 19 0.00017 0.013 15.3 0.4 1 23 718 741 718 741 0.94

18 19 0.97 73 3.5 0.2 2 23 749 770 748 770 0.96

19 19 0.00037 0.028 14.3 3.9 1 23 903 925 903 925 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.00024	0.018	14.9	4.0	1	23	96	118	96	118	0.98
2	19	0.24	18	5.4	3.9	1	23	124	146	124	146	0.97
3	19	3.3e-05	0.0025	17.6	3.4	1	23	152	174	152	174	0.98
4	19	3.6e-05	0.0028	17.5	0.9	1	23	180	202	180	202	0.98
5	19	0.0013	0.097	12.6	0.5	2	23	241	263	240	263	0.96
6	19	0.017	1.3	9.0	0.6	2	23	296	318	295	318	0.93
7	19	1.4	1.1e+02	3.0	0.6	2	20	326	344	325	348	0.81
8	19	0.074	5.6	7.0	0.1	3	23	382	402	381	402	0.97
9	19	0.027	2.1	8.4	0.3	2	23	414	435	413	435	0.97
10	19	0.0025	0.19	11.7	0.1	1	23	444	467	444	467	0.93
11	19	6	4.5e+02	1.0	0.2	1	19	472	490	472	495	0.76
12	19	2.9	2.2e+02	2.0	0.0	10	23	518	532	518	532	0.95
13	19	0.11	8.4	6.5	6.2	1	23	553	575	553	575	0.98
14	19	0.0016	0.12	12.3	0.0	1	23	580	603	580	603	0.95
15	19	0.14	10	6.2	0.4	2	23	649	672	648	672	0.89
16	19	0.00019	0.014	15.2	0.6	1	23	686	708	686	709	0.96
17	19	0.00017	0.013	15.3	0.4	1	23	718	741	718	741	0.94
18	19	0.97	73	3.5	0.2	2	23	749	770	748	770	0.96
19	19	0.00037	0.028	14.3	3.9	1	23	903	925	903	925	0.98

Sequence Information

Coding Sequence: ATGCTGTTCAAGGGGAATAGCTCCAGGCTGGAGTTTCTAATCGAGAAGATACAAGCGCATAAAGAATCACCTTCACCTTTGCCCGAGAAGTGCAACGTGAAATTAAAAGaTGGATTATTAAGTGGCAGTTACTCCTGGCGAAGTGAAGAAGACAGTTTGACCTGTCAACGAGGTGGTGGCACCCCGTCATCATGTGCAACCTCCACATCCCAAAGTTTTCCCTCAGAAACTGAAATCGATGGAGAATTGCGAATAAATGTTGATTCCCATAACTCATCAGGTCCATACTCATGTCAATTCTGCGTTAAAACGTTTCCCAGTTTGAGTTGTTTGAAGAAACACGAGCAGACCCATGGCGATCAGATGCCATACAGATGCAGTTGGTGCGCAAGATTGTTTAAACACAAACGAAGTAGAGATCGCCACGTGAAACTACACACTGGGGACAGAAGATACCGTTGTATCCACTGTGAAGCAGCATTTTCACGAAGCGATCATTTGAAGATTCACATGAAAACCCACGACAATCAGAAGCCATACCACTGCACCGAATGTTCCCGCGGCTACAACACAGCAGCAGCGTTAACCTCCCACATGCAGTCCCACAAGAGGCTCTTAAGCACCCCGCACTACCAGCGCTCTCTCTCGACGACCTCCCCCCCAGTGCTGGCCTCCCCGGAGCTCCAACAAAATCTGCAGTATGCCTCCCCACTGCACCTGACCTGCATGTACTGCAGGGATACCTTCTCCACGATGGATCAGCTCCAGTTACACATCCAGACCGCCCACGAGACTCTTCTTCCGCTTCCTAGtccctcctcctcccccccagACCCAGCTGATTGTCGAAGGTTTAGAAACAGAGCAACAGACCTGGAAGACCTGACCTGCAGGAGGTGTTCTGCCAAGTTCAACAAGCTGTCATCCCTCCGAGAGCATCTGGTGTCAGCTCACAACGACGGATTTCCGGTCTTGACCTGTCCTCTATGCTTCAAGCCTTGTTCATCAACGACGGTATATGCCGAACACTACGTCCTCGAGCACTGTGAAAACAAGAACATGCTTCTTCGCTCGAAGAACTCagaagcagaaaatttctacGAATCTCCGAAGATGCCGAGCTACTCATCAGGCACACTCCTCTGTGGTCAATGTGGCGCAGCCTTGAAAGACTTTGAATCTTTCAGATCGCACTTAGCCAGACATCTCCATGCTAATCAGCAAGCAGCAGCTGAGGTTAGCTGTCCCAAATGTGAGCTCAAGTTTCAGGAGCGAGAAGACATGCTGCTGCACCTGATGAAGCACTTTATGGGACAAATTTTGAAGAAGTTCAATTGCGATTCCTGCGACGAGCTCTTCGGGGACTCTGAGTCACTCCAGAAGCACCTGTTGGACGCGCATGCTCATCAGTTATACAGATGCGGGATCTGCAGGGACACGTTCGATTCAATCGTCGGAATCCAGGTGCATTTCACCCTCAAGCATTCGCAGGAAGCCAATGTCTACCCCTGCAGCGCCTGCAGAGGGACTGGACTGGAGCATAGTGAGTGGTTCAGAACCCCTGGAGATCTCCTTGATCATGTGAGGAACGTCCATGTACCAGATCTGAATTCCCCTGGCAACTCGGTCTCAACTCCTAGAGTCATTGGGGAGTTCTTCAGATGTTGCTTCTGTGGAATATTCTGCTCTTCAGATAACGATCTTCAACATCATCTTGCCAGTCACTCCACATGCGTGTTTCGGTGCCCTATCTGCAGGGAAGGATTCCCCGTCGAATTCCTCCTCGACAGGCACATGGCGAATGCGCACAATTTGACTGACAGGGCAGATGACTCGGAAGAGAAAAACTCTTTAAAAAGGAGGAGGTCTCCAGATTTCAACAGCAATGGCAACCACCATAACAATTCCTTTAGTAATTCAACAATACCACCAATGAGGACTCAACAATGTGAACTCTGTGACAGATCAGACTTCTCAAACGATTCCGAGCTCAAGGCTCACAAGAAGCTAGCTCACAAGACCATTTCCACAAAAATTCAGAAACTGTCAGCTTCTTTCGTCTGCAGCTACTGCGGAGAGGGTCTTCGCTCCCGCTTGGAGCTGGAGTCGCATACCAGGGTTCATCATGCTCCTGTTGATCCCGGAAAAAGATACAAGTGCAATATCTGTGATGAAGTTTTCTCGTCCGGAAGTTTTCTCGCCGAGCACAAGCTCCAGAAGCACTGCAAGATTCAGATGAGTGATGTTTGTGTCGTCTGCAGGGCTTCGCTGGCCAGTGAGAGGGACTTTCTCGAGCATATTCACAAACATAGTTTGGAGGGGGTCGAGGGGAGGGAAGGCATTGTGAGCCATGTACCAGCTCACTGCGTTGTTTGCAGGCAGACGCTTATTAGTGAGTTTGAATGTCAACTTCATGCCAAGTTTCATCTGAGGAGCGAAGAGGAAGAGCGGATGGTCGGGGAGGTCGGGAGGTGTTGTATTTGTCTGAGGGCAATGGGGGAGGAGGAGAGGGTCAGTCTGCCGTCGAAGGAGGTGGGGGGTAAGACGGGCCTGAAGGTTTGTAAGACGTGCTTTCTGAGGCACTCACAGGGGCTGCCGATTTTGACGAGTCCTTATGAGGTCTGCAAGGAGGAGGGAGAAAGGGTGGGGGTCAAGGAGGAGGAAGACAACTGTAGTTCAAAGGAACAAACTGATTCAACCCGTCCGTACGACTGTCCACACTGCAGTCTAAGGTTCACCTTTAGAAATGAACTGGAGCATCATGTTTCAACGCATGATGATAAAGATACATCAAAAGACACTGTAGACAATATCATTGTCAAAGAGGAGATTGTTGTGAATACTGGGGGAGATCAAAGTGAGGAGAGGAGTGAGCACTTAGGGGAGGGGAGTGACTCTTCTGTGAACGATAAAGTTGACTAG
Protein Sequence: MLFKGNSSRLEFLIEKIQAHKESPSPLPEKCNVKLKDGLLSGSYSWRSEEDSLTCQRGGGTPSSCATSTSQSFPSETEIDGELRINVDSHNSSGPYSCQFCVKTFPSLSCLKKHEQTHGDQMPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCIHCEAAFSRSDHLKIHMKTHDNQKPYHCTECSRGYNTAAALTSHMQSHKRLLSTPHYQRSLSTTSPPVLASPELQQNLQYASPLHLTCMYCRDTFSTMDQLQLHIQTAHETLLPLPSPSSSPPDPADCRRFRNRATDLEDLTCRRCSAKFNKLSSLREHLVSAHNDGFPVLTCPLCFKPCSSTTVYAEHYVLEHCENKNMLLRSKNSEAENFYESPKMPSYSSGTLLCGQCGAALKDFESFRSHLARHLHANQQAAAEVSCPKCELKFQEREDMLLHLMKHFMGQILKKFNCDSCDELFGDSESLQKHLLDAHAHQLYRCGICRDTFDSIVGIQVHFTLKHSQEANVYPCSACRGTGLEHSEWFRTPGDLLDHVRNVHVPDLNSPGNSVSTPRVIGEFFRCCFCGIFCSSDNDLQHHLASHSTCVFRCPICREGFPVEFLLDRHMANAHNLTDRADDSEEKNSLKRRRSPDFNSNGNHHNNSFSNSTIPPMRTQQCELCDRSDFSNDSELKAHKKLAHKTISTKIQKLSASFVCSYCGEGLRSRLELESHTRVHHAPVDPGKRYKCNICDEVFSSGSFLAEHKLQKHCKIQMSDVCVVCRASLASERDFLEHIHKHSLEGVEGREGIVSHVPAHCVVCRQTLISEFECQLHAKFHLRSEEEERMVGEVGRCCICLRAMGEEERVSLPSKEVGGKTGLKVCKTCFLRHSQGLPILTSPYEVCKEEGERVGVKEEEDNCSSKEQTDSTRPYDCPHCSLRFTFRNELEHHVSTHDDKDTSKDTVDNIIVKEEIVVNTGGDQSEERSEHLGEGSDSSVNDKVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00728836; iTF_00438951; iTF_01273981; iTF_01273282;
90% Identity: -
80% Identity: -