Basic Information

Insect: Fopius arisanus
Gene Symbol: L
Assembly: GCA_000806365.1
Location: NW:368956-374895[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1.7e-05 0.0012 18.4 4.3 1 23 97 119 97 119 0.98

2 19 0.23 16 5.5 3.9 1 23 125 147 125 147 0.97

3 19 5e-07 3.4e-05 23.3 4.3 1 23 153 175 153 175 0.99

4 19 3.5e-05 0.0024 17.5 0.9 1 23 181 203 181 203 0.98

5 19 0.0058 0.39 10.5 0.6 2 23 242 264 241 264 0.96

6 19 0.012 0.79 9.5 0.7 2 23 297 319 296 319 0.93

7 19 0.031 2.1 8.2 0.2 2 23 327 349 326 349 0.89

8 19 0.062 4.2 7.2 0.2 3 23 381 401 380 401 0.97

9 19 0.18 12 5.8 0.5 3 23 414 434 414 434 0.98

10 19 0.0092 0.63 9.9 0.7 1 23 443 466 443 466 0.92

11 19 2.6 1.7e+02 2.2 0.2 1 23 471 494 471 494 0.80

12 19 0.43 29 4.6 0.0 7 23 515 532 501 532 0.84

13 19 0.0023 0.16 11.7 1.9 1 23 553 575 553 575 0.98

14 19 0.0012 0.081 12.6 0.0 1 23 580 603 580 603 0.97

15 19 0.69 47 4.0 2.3 1 23 647 671 647 671 0.88

16 19 0.00018 0.012 15.3 0.6 1 23 685 707 685 708 0.96

17 19 0.00016 0.011 15.4 0.4 1 23 717 740 717 740 0.94

18 19 8 5.4e+02 0.6 1.7 3 23 749 769 747 769 0.95

19 19 0.015 1 9.2 2.7 1 23 897 919 897 919 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1.7e-05	0.0012	18.4	4.3	1	23	97	119	97	119	0.98
2	19	0.23	16	5.5	3.9	1	23	125	147	125	147	0.97
3	19	5e-07	3.4e-05	23.3	4.3	1	23	153	175	153	175	0.99
4	19	3.5e-05	0.0024	17.5	0.9	1	23	181	203	181	203	0.98
5	19	0.0058	0.39	10.5	0.6	2	23	242	264	241	264	0.96
6	19	0.012	0.79	9.5	0.7	2	23	297	319	296	319	0.93
7	19	0.031	2.1	8.2	0.2	2	23	327	349	326	349	0.89
8	19	0.062	4.2	7.2	0.2	3	23	381	401	380	401	0.97
9	19	0.18	12	5.8	0.5	3	23	414	434	414	434	0.98
10	19	0.0092	0.63	9.9	0.7	1	23	443	466	443	466	0.92
11	19	2.6	1.7e+02	2.2	0.2	1	23	471	494	471	494	0.80
12	19	0.43	29	4.6	0.0	7	23	515	532	501	532	0.84
13	19	0.0023	0.16	11.7	1.9	1	23	553	575	553	575	0.98
14	19	0.0012	0.081	12.6	0.0	1	23	580	603	580	603	0.97
15	19	0.69	47	4.0	2.3	1	23	647	671	647	671	0.88
16	19	0.00018	0.012	15.3	0.6	1	23	685	707	685	708	0.96
17	19	0.00016	0.011	15.4	0.4	1	23	717	740	717	740	0.94
18	19	8	5.4e+02	0.6	1.7	3	23	749	769	747	769	0.95
19	19	0.015	1	9.2	2.7	1	23	897	919	897	919	0.96

Sequence Information

Coding Sequence: ATGCTGTTCAAGGGGAATAGCTCGAGGCTGGAGTTtttgattgagaaaattcaagctCATAAGGAGTCGCCATCCCCTCTGCCAGAGGAGAAGTGCAGTGTCAAGTTGAAAGaTGGATTATTGGGTGGCAGTTACTCTTGGCGAAGTGAGGAAGACAGTTTGACATGTCAACGAGGTGGTGGCACCCCTTCGTCGTGTGCCACCTCGACGTCCCAGAGTTTTCCATCGGAAACTGAAATCGATGGAGATTTGCGGATTAACACTGACTCCCACAACTCATCTGGTCCATACTCATGTCAATTTTGTGACAAAACATTCCCCAGTCTGAGTTGTCTCAAGAAACACGAGCAGACCCATGGCGATCAAATGCCATACAGATGCAGCTGGTGCGCAAGATTGTTCAAACACAAACGAAGTAGAGATCGCCACGTGAAACTACACACTGGGGACCGAAGATACCGTTGTACCCACTGTGAAGCAGCATTTTCACGAAGtgatCACTTGAAGATTCACATGAAGACACACGATAACCAGAAGCCGTACCACTGCACGGAGTGCTCGAGAGGTTACAACACAGCAGCAGCGCTAACCTCTCACATGCAGTCACACAAAAGGCCACCGAGTACGCCCCACTGTCAGCGTTCCCTCCCAACATCCTCACCGCCAGCAATCGCATCCCCAGATCACCAGCCAAAGCTCCAGTACCACTCCCCCCTCCACCTGACCTGCATGTACTGCAGGGACACCTTCTCCTCGATGGAGCAACTCCAGGTGCACGTGCAAACGTCCCACGAGGCACTCCTACCCCTCCCAAGTCCGTCCTCCTCTTCACCAGAGGCTAATGACTGTCGAAGACTCAGAGCGAAACCCTCAGACCTGGAGGATTTGACCTGCAGACGATGCGCCACGAAATTCAGCAAGCTATCTTCACTCCGAGAGCACCTGGTCTCAGCACACAATGACGGACTCACCACGTTGACCTGTCCCCTGTGCTCGAAGCCCTGCTCATCAGCTACAGCATACGCCGAGCACTACGTACTCGAGCACTGCGAGAACAAGAGCATCATTCCACGCTCGAAACCAGAGATCGACAAGTTGTACGAATCACCGAAgtcgaattatttatcaggCACACTTCTCTGTGGTCAGTGTGGTGCAGCACTCAAGGACTTCGAGTCCTTCAGGACACACCTTGCAAGACATCTGCATGCCAACCAGCAAGCAGCTGCTGGAATCGGTTGTCCAAAGTGTGAGCTCAAATTTCAGGTGCGTGAGGATATGCTGATGCACCTGACGAAGCACTTCATGGGACAAATCGTCAAGAAGTTCTGCTGCGATGCATGCGATGAACTCTTCGGGGACTCGAAGAGCCTCCAGAAGCACCTGCTGGATATCCATGCACACCACCTCTTCCGGTGCGAGATATGCAGGGACACGTTTGACTCAGTCGTCGGAATTCAGGTGCATTTCACCGTCAAGCACTCGCAGGAGGCCAGCCTTTACCCCTGCAACTCCTGCAGGGGCAGAGGTGGATCAGAGCCTGGAGAAGGATTCAGAACGCCTGGAGAGCTTCTGGATCACGTGAGAAATGTGCATGCCTCCGATCTGAATTCCCCAGGGAACTCAGTCTCAACTCCTAAAGTCGTCGGTGAGTTCTTCAGGTGCGGCTTCTGTGGGATATTCTGCCCGTCGGACAGCGATCTTCAGCATCACCTCGCCAGCCACTCAACGTGTCTCTTTCGTTGTCCCATCTGCAGAGAAGGCTTCCCCGTCGAATTCCTTCTCGATAAACACATGGCGAGTGCTCACAATTTAATTGGACAATCGGAAGACTCCGAGGAGAAATCCTCGTTGAAGAGACGACGCTCACCAGACTTCAACAGCAATATCAATCAGCAAGAACAGTCCTTTGGCAATCCAACGACACCAGGACGACCTCATCACTGCGATCTCTGCGACAGGTCTGACTTTTCGAGTGACTCTGAGCTCAAGGCGCACAAGAAACTCGCTCACAAGACAGTTTCATCGAAAGTACAGAAGCTGTCGACTTCATTCGTCTGCAGTTACTGCGGCGAGGGTCTGCGATCCAGACTAGAGCTTGAGTCTCATACCAGGGTCCACCATGCCCCTGCAGACCCaggtaaaaaatacaaatgcaACATCTGTGATGAAGTCTTCTCGTCCGGCAGCTTTCTCGCTGAGCACAAGCTTCAGAAGCACTGCAAGATACAGATCAGCGATATTTGTGTTGTCTGCAGGTGCACCCTCGCCAGCGAGAGGGACTTCCTGGAGCATGTGCATAAACACAGCTTGGAGGGGCTTGAGGGGAGAGAGGCAATTGTCAGCCACGTACCAGCTCATTGCGTTGTTTGCCGGCAGACGCTTATCAGTGAGTTTGAATGCCAGCTTCATGCCAAGTTTCATCTGAGAAGTGAGGATGAGGAGCGCGGTGATATCGGTAGCTGTTGTATTTGTCTGAGAGAAGTTGGAGAGGGTGAGAGGGTCTCTCTACCGGCCAACGATGCAAGCGAACAGGGGCTCAAAGTATGCAAGAGGTGCTTCCTCAGGCACTCGCAGGGGTTGCCCATTTTGACGAGCCCCTATGAGGTATGCAAGGAGGAGGGCGACGTCGCGGTCAAGGAGGAGGACGAATCCTCCAGCGAGAAGGAAAATGATTCTACCCGTCCATATGACTGTCCATGTTGCAGTCAAAGGTTCAACTTTAAAAGTGAACTGGAGTATCATGTGTCGACACATGATGATAAAGATGCATCAAAAGACACTTCAGACAGTGTCATTGTTAAAGAGGAGATTGTTGTGAATACTGGGGAAGATCAAAGCGATGACAGGAGTGACACCTCCGTGGACGATAAAGTTGACTAA
Protein Sequence: MLFKGNSSRLEFLIEKIQAHKESPSPLPEEKCSVKLKDGLLGGSYSWRSEEDSLTCQRGGGTPSSCATSTSQSFPSETEIDGDLRINTDSHNSSGPYSCQFCDKTFPSLSCLKKHEQTHGDQMPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCTHCEAAFSRSDHLKIHMKTHDNQKPYHCTECSRGYNTAAALTSHMQSHKRPPSTPHCQRSLPTSSPPAIASPDHQPKLQYHSPLHLTCMYCRDTFSSMEQLQVHVQTSHEALLPLPSPSSSSPEANDCRRLRAKPSDLEDLTCRRCATKFSKLSSLREHLVSAHNDGLTTLTCPLCSKPCSSATAYAEHYVLEHCENKSIIPRSKPEIDKLYESPKSNYLSGTLLCGQCGAALKDFESFRTHLARHLHANQQAAAGIGCPKCELKFQVREDMLMHLTKHFMGQIVKKFCCDACDELFGDSKSLQKHLLDIHAHHLFRCEICRDTFDSVVGIQVHFTVKHSQEASLYPCNSCRGRGGSEPGEGFRTPGELLDHVRNVHASDLNSPGNSVSTPKVVGEFFRCGFCGIFCPSDSDLQHHLASHSTCLFRCPICREGFPVEFLLDKHMASAHNLIGQSEDSEEKSSLKRRRSPDFNSNINQQEQSFGNPTTPGRPHHCDLCDRSDFSSDSELKAHKKLAHKTVSSKVQKLSTSFVCSYCGEGLRSRLELESHTRVHHAPADPGKKYKCNICDEVFSSGSFLAEHKLQKHCKIQISDICVVCRCTLASERDFLEHVHKHSLEGLEGREAIVSHVPAHCVVCRQTLISEFECQLHAKFHLRSEDEERGDIGSCCICLREVGEGERVSLPANDASEQGLKVCKRCFLRHSQGLPILTSPYEVCKEEGDVAVKEEDESSSEKENDSTRPYDCPCCSQRFNFKSELEYHVSTHDDKDASKDTSDSVIVKEEIVVNTGEDQSDDRSDTSVDDKVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00438288;
90% Identity: -
80% Identity: -