Basic Information

Insect: Dexiosoma caninum
Gene Symbol: -
Assembly: GCA_963924685.1
Location: OZ004726.1:11893851-11906438[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.044 3.5 9.0 0.1 2 23 233 255 232 255 0.91

2 15 2.3 1.8e+02 3.6 0.0 6 23 264 281 264 281 0.96

3 15 0.00019 0.015 16.4 0.4 1 23 287 310 287 310 0.97

4 15 0.0014 0.12 13.6 4.8 1 23 320 342 320 342 0.99

5 15 3.9e-05 0.0031 18.6 2.6 2 23 349 371 348 371 0.95

6 15 4.7e-05 0.0038 18.3 2.9 1 23 376 398 376 398 0.96

7 15 0.092 7.3 8.0 0.7 2 23 407 428 406 428 0.97

8 15 0.00012 0.0095 17.1 1.3 2 23 434 456 434 456 0.92

9 15 2.4e-05 0.0019 19.2 0.4 2 23 463 484 462 484 0.96

10 15 0.014 1.1 10.5 1.3 1 16 490 505 490 507 0.91

11 15 3.2e-05 0.0026 18.9 3.5 1 23 526 548 526 548 0.94

12 15 0.043 3.5 9.0 2.9 2 23 557 578 557 578 0.98

13 15 5.1e-06 0.00041 21.4 1.5 1 22 583 604 583 606 0.89

14 15 8e-06 0.00064 20.7 0.4 2 23 613 634 612 634 0.96

15 15 9.5e-06 0.00076 20.5 2.4 1 23 640 663 640 663 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.044	3.5	9.0	0.1	2	23	233	255	232	255	0.91
2	15	2.3	1.8e+02	3.6	0.0	6	23	264	281	264	281	0.96
3	15	0.00019	0.015	16.4	0.4	1	23	287	310	287	310	0.97
4	15	0.0014	0.12	13.6	4.8	1	23	320	342	320	342	0.99
5	15	3.9e-05	0.0031	18.6	2.6	2	23	349	371	348	371	0.95
6	15	4.7e-05	0.0038	18.3	2.9	1	23	376	398	376	398	0.96
7	15	0.092	7.3	8.0	0.7	2	23	407	428	406	428	0.97
8	15	0.00012	0.0095	17.1	1.3	2	23	434	456	434	456	0.92
9	15	2.4e-05	0.0019	19.2	0.4	2	23	463	484	462	484	0.96
10	15	0.014	1.1	10.5	1.3	1	16	490	505	490	507	0.91
11	15	3.2e-05	0.0026	18.9	3.5	1	23	526	548	526	548	0.94
12	15	0.043	3.5	9.0	2.9	2	23	557	578	557	578	0.98
13	15	5.1e-06	0.00041	21.4	1.5	1	22	583	604	583	606	0.89
14	15	8e-06	0.00064	20.7	0.4	2	23	613	634	612	634	0.96
15	15	9.5e-06	0.00076	20.5	2.4	1	23	640	663	640	663	0.98

Sequence Information

Coding Sequence: atgatttgtcGTCtgtgtttaaaagaaattccaaaCGAGTCTTGTATCAAGCTATATGAAAATTTGGAACCATCTGCCGAATCTATAGAAATGGTCAAATTAATTCACAAATACCTTGAAATCGATatTAAACATAACGACATCATATCTACTATTATATGCCAAGATTGTTACGATCATTTGGAAGAGTTTCACAGATTTTCGCAACAAGTAGCCAAGAAACAATTGACACTTGAGAATGAGTTTCTAGATGTAaacttaaagaaagaatttaattttgatgataatgatgactgGAATAATGATGGAACGGAAGAcaaatttccaataaattcaAAACAGACAACACAAAAAGTTAATGTCAACTGTCcaataaatatgtttaaaaatgaatCGGAGAATGATGAAAAGGATGAACAGGAGATGCCAACAGAAGATTTATTTGAGAATGTGATAAGTAATGAAGAGGAGGATATCATAGCGCCCGATAGTGTGGGAGAATCGAACATACATGATCAGTTGTTATCTGATAacgatgatgatgatgtacCGTTAATTAAGTTTAAATCTGCTAAGAAGCCATCacagaataaaaaaatgaagaaaacatCAACTAAAGTACGAGagtttaaagaaaagaaaccaGCTAAAAAGAAATTATCCGCGGAAAAAGAAGTAGCGTTGCTGATGGATCTTAAATGTGACATTTGTCAAACCGGCGTTGATACGTGGAAAGCTCTAAGAGAGCATTTTCTGTTGGCACATACTAAAACGCCATATATTAAGTGCTGTGATATTATTTATCGTAAACCACGAGCTCTAATGGAACATCTTGAGTGGCATAAAAATCCCGATATGTTCAAATGTCAaatttgtgataaaaatatGTCCAGTGCACGTAATTTAACTATACATATTACATCGGAACATCCTGATAAAACAGATGTAATAGAATTTTACGAATGTGAGCATTGTTCGAAGCGTATTAGAAATTATAACTTGTTCAAAAAGCATTTACGATCACACAACAAAGACAAGGAGGTAGAATGCCACATATGCAATAAAAGaTTTCCATCCGAATACCATTTAGATCGTCATATCAGTAGTTTTCATAGGAAAACACCTCACATCTGTGATATTTGTGGTcgaacatataaaaataaaactggatTTAAGCGTCATTATAATGAACATCAAGGTATTGTTTCTCAAGCCGTACAGTGTTCGATTTGCAATAGATGGCTTAAGAATGAAGAATCATTACGAATGCATCGTTTCACTCATGAGGAACATCCAGCATCGTGTGATATTTGTGGTAAAATGTTCAAAACAAAACGTAGATTATATAGACACAAAATATACTGGCATACGTTGGACACCAATTTACAATGTAGTTTTTGCGATAAAGTTTTTCGTGAAAAGCGTAATCTTGATGAACACATGGCCATACATACCGGCGTTCAACTTTATACATGTCCACATTGTGGCAAAGACTCTCGTTCGaaatcaaatatATGTGCAACTATATATCGTTTGCGTAATCATATTGCATCCGTACACAATAATATATATCATCATATTTGTGAtatttgtgggaaaaagttcaaATCAAAGACATCATTCCAAAAGCACTATGACGAACATCAAGGTATTATTGAACCTCCAGCTCAGTGTACAATATGTGGTGCATGGCTAAAAAATCAACATAGTTTACGTGTGCATCACCAAACGCACGAAGATACTCAGTTCGCTTGCGatatttgtggtaaatttttcaaaactaaaaagaaTTTAAGTCGACATAAGGGATACTGGCATCGGCGGGAACGTAATCTTTCTTGCAGCTATTGTGACAAGGTGTTTCGTGAAAAACGTAATCTGGATGAACATATGGCCATGCATACAGATACAAATTTGTATACATGTCCTCATTGCGGCAAAGAGTCAAGGTCTAAATCgaatatgtatgttcatatcaAAAGACAGCATCCCGATGAATGGTGGAAGTCAAAACAAGAACGTTATAAACTAAAACCCGAAGAATTAGAACAGGGAGCCAACGCAGATGTGGAAAAATGTCACAAGTCATCACAATTTGAATCTGATCTTTCTGCTAACCAAGAATGCAAAAATGCGGACtaa
Protein Sequence: MICRLCLKEIPNESCIKLYENLEPSAESIEMVKLIHKYLEIDIKHNDIISTIICQDCYDHLEEFHRFSQQVAKKQLTLENEFLDVNLKKEFNFDDNDDWNNDGTEDKFPINSKQTTQKVNVNCPINMFKNESENDEKDEQEMPTEDLFENVISNEEEDIIAPDSVGESNIHDQLLSDNDDDDVPLIKFKSAKKPSQNKKMKKTSTKVREFKEKKPAKKKLSAEKEVALLMDLKCDICQTGVDTWKALREHFLLAHTKTPYIKCCDIIYRKPRALMEHLEWHKNPDMFKCQICDKNMSSARNLTIHITSEHPDKTDVIEFYECEHCSKRIRNYNLFKKHLRSHNKDKEVECHICNKRFPSEYHLDRHISSFHRKTPHICDICGRTYKNKTGFKRHYNEHQGIVSQAVQCSICNRWLKNEESLRMHRFTHEEHPASCDICGKMFKTKRRLYRHKIYWHTLDTNLQCSFCDKVFREKRNLDEHMAIHTGVQLYTCPHCGKDSRSKSNICATIYRLRNHIASVHNNIYHHICDICGKKFKSKTSFQKHYDEHQGIIEPPAQCTICGAWLKNQHSLRVHHQTHEDTQFACDICGKFFKTKKNLSRHKGYWHRRERNLSCSYCDKVFREKRNLDEHMAMHTDTNLYTCPHCGKESRSKSNMYVHIKRQHPDEWWKSKQERYKLKPEELEQGANADVEKCHKSSQFESDLSANQECKNAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00760313;
90% Identity: iTF_00436140;
80% Identity: iTF_00436140;