Dpun010132.1
Basic Information
- Insect
- Dendrolimus punctatus
- Gene Symbol
- -
- Assembly
- GCA_012273795.1
- Location
- CM022540.1:19049534-19062767[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.5e-11 3.1e-08 33.6 0.0 4 39 169 205 166 209 0.89 2 4 4.3e-11 3e-08 33.6 0.3 2 39 221 258 220 261 0.92 3 4 8.9e-15 6.1e-12 45.4 0.0 2 45 276 320 275 320 0.96 4 4 6.2e-17 4.3e-14 52.3 0.0 1 42 327 369 327 370 0.96
Sequence Information
- Coding Sequence
- ATGCCCGGCCCGGGGTGGTCTCAAGTGAAGTGCGAGCCGCCCTCGGACGACGAAGACACCGACGCACACTTCGCACGCCGTTTCATTGATAGCCAGCTTCCTAGTATCGAACTCCGTCCTGTTAAATTAGAGCCAGAAGTCATCAGTCAAAATGAAGAACTGTCATCGCATTTGTTGGAACTGGAAAATCTACAgGGCAGTGGCCTTGAAGAGCTGGCACCTCTGGCGCCGGCTGCTCCGGCCGCGACGCCGGTGTGCGTCAAGCAGGAGCCAGTCTGTGCACCAGCGGCATTCACTCTGGAAACTTTGGAGTCAGCGTCACACGCTATGGGCTTTAGGGTTAGTGATCGTCACATGGCAGCGTTGGGTACCGAGATGGGCGACTCGACCGACTTCGCCCCCTTCATGGCCCAACAGCAGTTGAGTGGCGATGATACGAGCGACTCATGCGGCGCACATTCGGAGTTCTCGATGAGGGCTAGTCCCAAGAGCTGGACTCAGAAGGACATGGAGAAGGCCCTCGAAGCACTAAGGAAACACGATATGAGTTTAACCAAGGCGTCAGCGACGTACGGCATACCGTCGACGACACTATGGCAACGGGCGCATAAGTTGGGCATCGACACGCCCAAGAAGGAAGGCTCTTCTAAGTCATGGAGCGAGGCGGACTTAAGGGGCGCCCTGCACGCCTTGAGGGCGGGCGCCATCTCCGCCAACAAAGCCAGCAAGGCGTATGGTATCCCGAGCAGCACCCTGTACAAGATAGCGCGTCGCGAGGGCATCCGGCTGGCGGCGCCGTTCAACGCGGCGCCCACGGCGTGGCGGCGCGCCGACCTGCAGCTGGCGCTCGCCTCCATCCGCTGCGGCGCCTGCTCCGTGCAGCGCGCGGCCGCGCGGTACGGAATACCCACAGGCACTCTGTACGGGCGTTGCAAGCGGGAAGGCATCGAGCTGTCCCGCTCCAATCCCACGCCGTGGTCCGAGGACGCTATGGGGGAGGCCCTCGACGCTGTCAGAATCGGGCAGATGTCGATAAACCAGGCGGCCATCCACTACAACCTACCTTATTCATCGCTTTACGGGAGGTTCAAACGGTGCAAATATCAGATACCTGGTACACCAAATCACGCAGAGCATCAGATCGATCAGCAAAATCACGAAATGGAGAATCACATACCCCCACAGGATCTCTACTATCCCCACCAAATCGCAGAGCAATTCCAATACCCGCGGGATTGTCCACAAAATATGATACAGGACCTACCCCAGGATTATCCAGGAATGTATTACAACCAGTTCAACGGCATAGCGACCAGTTGA
- Protein Sequence
- MPGPGWSQVKCEPPSDDEDTDAHFARRFIDSQLPSIELRPVKLEPEVISQNEELSSHLLELENLQGSGLEELAPLAPAAPAATPVCVKQEPVCAPAAFTLETLESASHAMGFRVSDRHMAALGTEMGDSTDFAPFMAQQQLSGDDTSDSCGAHSEFSMRASPKSWTQKDMEKALEALRKHDMSLTKASATYGIPSTTLWQRAHKLGIDTPKKEGSSKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLQLALASIRCGACSVQRAAARYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALDAVRIGQMSINQAAIHYNLPYSSLYGRFKRCKYQIPGTPNHAEHQIDQQNHEMENHIPPQDLYYPHQIAEQFQYPRDCPQNMIQDLPQDYPGMYYNQFNGIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00432047; iTF_00433061;
- 90% Identity
- iTF_00432047; iTF_00433061;
- 80% Identity
- -