Dpun009706.1
Basic Information
- Insect
- Dendrolimus punctatus
- Gene Symbol
- -
- Assembly
- GCA_012273795.1
- Location
- CM022540.1:18733022-18792847[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5e-11 3.4e-08 33.4 0.0 4 39 206 242 203 246 0.89 2 4 4.8e-11 3.3e-08 33.5 0.3 2 39 258 295 257 298 0.92 3 4 1e-14 6.8e-12 45.3 0.0 2 45 313 357 312 357 0.96 4 4 3.5e-17 2.4e-14 53.1 0.0 1 43 364 407 364 408 0.96
Sequence Information
- Coding Sequence
- ATGTTGCGGGGCACAAAGGGCGGATCGCTTCCACTCGTCGCGCCGGCACAAAGCCCCGCAGACCCGTCGTGCTCGGCCCGGGAATCGATCGTGGAACCACCGCTGCAGTATTCATCGTCAGTGACACCTCGCCCCTTGACTGAGTGCTGCGGTCGTGAGATTGATTGCCGCCCTACGCTTCCTAGTATCGAACTCCGTCCTGTTAAATTAGAGCCAGAAGTCATCAGTCAAAATGAAGAACTGTCATCGCATTTGTTGGAACTGGAAAATCTACagGGCAGTGGCCTTGAAGAGCTGGCACCTCTGGCGCCGGCTGCTCCGGCCGCGACGCCGGTGTGCGTCAAGCAGGAGCCAGTCTGTGCACCAGCGGCATTCACTCTGGAAACTTTGGAGTCAGCGTCACACGCTATGGGCTTTAGGGTTAGTGATCGTCACATGGCAGCGTTGGGTACCGAGATGGGCGACTCAACCGACTTCGCCCCCTTCATGGCCGTGAAAGACGAGCCACTCTCCGAAGGAGAGCAACAGCAGTTGAGTGGCGATGATACGAGCGACTCATGCGGCGCACATTCGGAGTTCTCGATGAGGGCTAGTCCCAAGAGCTGGACTCAGAAGGACATGGAGAAGGCCCTCGAAGCACTAAGGAAACACGATATGAGTTTAACCAAGGCGTCAGCGACGTACGGCATACCGTCGACGACACTATGGCAACGGGCGCATAAGTTGGGCATCGACACGCCCAAGAAGGAAGGCTCTTCTAAGTCATGGAGCGAGGCGGACTTAAGGGGCGCCCTGCACGCCTTGAGGGCGGGCGCCATCTCCGCCAACAAAGCCAGCAAGGCGTATGGTATCCCGAGCAGCACCCTGTACAAGATAGCGCGTCGCGAGGGCATCCGGCTGGCGGCGCCGTTCAACGCGGCGCCCACGGCGTGGCGGCGCGCCGACCTGCAGCTGGCGCTCGCCTCCATCCGCTGCGGCGCCTGCTCCGTGCAGCGCGCGGCCGCGCGGTACGGAATACCCACAGGCACTCTGTACGGGCGTTGCAAGCGGGAAGGCATTGAGCTGTCCCGCTCCAATCCAACGCCGTGGTCCGAGGACGCTATGGGGGAGGCCCTCGACGCTGTCAGAATCGGGCAGATGTCGATAAACCAGGCGGCCATCCACTACAACCTACCTTATTCATCGCTTTACGGGAGGTTCAAACGGTGCAAATATCAGTTACCTGGTACACCAAATCACGCAGAGCATCAGATCGATCAGCAAAATCACGAAATGGAGAATCACATACCCCCACAGGATCTCTACTATCCCCACCAAATCGCAGAGCAATTCCAATACCCGCGGGATTGTCCACAAAATATGATACAGGACCTACCCCAGGATTATCCAGGAATGTATTACAACCAGTTCAACGGCATAGCGACCAGTTGA
- Protein Sequence
- MLRGTKGGSLPLVAPAQSPADPSCSARESIVEPPLQYSSSVTPRPLTECCGREIDCRPTLPSIELRPVKLEPEVISQNEELSSHLLELENLQGSGLEELAPLAPAAPAATPVCVKQEPVCAPAAFTLETLESASHAMGFRVSDRHMAALGTEMGDSTDFAPFMAVKDEPLSEGEQQQLSGDDTSDSCGAHSEFSMRASPKSWTQKDMEKALEALRKHDMSLTKASATYGIPSTTLWQRAHKLGIDTPKKEGSSKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLQLALASIRCGACSVQRAAARYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALDAVRIGQMSINQAAIHYNLPYSSLYGRFKRCKYQLPGTPNHAEHQIDQQNHEMENHIPPQDLYYPHQIAEQFQYPRDCPQNMIQDLPQDYPGMYYNQFNGIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00433062;
- 90% Identity
- iTF_00433062;
- 80% Identity
- -