Dpun008286.1
Basic Information
- Insect
- Dendrolimus punctatus
- Gene Symbol
- foxo
- Assembly
- GCA_012273795.1
- Location
- CM022530.1:16822311-16831097[+]
Transcription Factor Domain
- TF Family
- Fork_head
- Domain
- Fork_head domain
- PFAM
- PF00250
- TF Group
- Helix-turn-helix
- Description
- The fork head domain is a conserved DNA-binding domain (also known as a winged helix) of about 100 amino-acid residues. Drosophila melanogaster fork head protein is a transcription factor that promotes terminal rather than segmental development, contains neither homeodomains nor zinc-fingers characteristic of other transcription factors [1]. Instead, it contains a distinct type of DNA-binding region, containing around 100 amino acids, which has since been identified in a number of transcription factors (including D. melanogaster FD1-5, mammalian HNF-3, human HTLF, Saccharomyces cerevisiae HCM1, etc.). This is referred to as the fork head domain but is also known as a 'winged helix' [1, 2, 3]. The fork head domain binds B-DNA as a monomer [2], but shows no similarity to previously identified DNA-binding motifs. Although the domain is found in several different transcription factors, a common function is their involvement in early developmental decisions of cell fates during embryogenesis [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-14 2.5e-11 43.9 0.0 4 43 100 139 98 148 0.86
Sequence Information
- Coding Sequence
- ATGTCTATTCAGGGGGGCGGTGGGTACCAGAGCCCATGGTCGTCGCAGACTGGGCTCACGGAGCTAGAGGGGCCGATGGGCGAGCTGGAGCCGCTGGGCGAGCTGGCCGAGGTGGGCTTTGAGCCACAGACGCGCGCGCGCTCCAACACGTGGCCGCTGCCCAGGCCCGATAACTATGTGGACCCATCGGACGACGGCGGCTCCAAGAAGAATTCCAATCAAAACCTGTCGGGAGCACCACCGCTACCCACGTCAGTGGGCACAAAGAAGAACTCATCCCGTCGCAACGCGTGGGGCAACCTTTCTTATGCTGATCTCATCACCCAAGCCATTACCTCGGCGCAGGACAACAGGCTCACGTTGTCCCAGATATACGAGTGGATGGTCCAGAATGTGCCATATTTTAAGGATAAGGGGGATAGCAACTCGTCAGCTGGATGGAAG
- Protein Sequence
- MSIQGGGGYQSPWSSQTGLTELEGPMGELEPLGELAEVGFEPQTRARSNTWPLPRPDNYVDPSDDGGSKKNSNQNLSGAPPLPTSVGTKKNSSRRNAWGNLSYADLITQAITSAQDNRLTLSQIYEWMVQNVPYFKDKGDSNSSAGWK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01073426;
- 90% Identity
- iTF_00431953; iTF_01245757; iTF_00009825; iTF_01463982; iTF_00008721; iTF_00341158; iTF_00859281; iTF_01358710; iTF_00858368; iTF_01173094; iTF_00761448; iTF_00947721; iTF_00844139; iTF_01090510; iTF_00468015; iTF_00723791; iTF_01251567; iTF_01401103; iTF_00994192; iTF_00674132; iTF_00275070; iTF_00806514; iTF_00355948; iTF_01503669; iTF_00195000; iTF_00006905; iTF_01564378; iTF_01179324; iTF_00621842; iTF_01073426; iTF_01180147; iTF_00186964; iTF_00354909; iTF_00027582; iTF_00026667; iTF_00364735; iTF_01222303; iTF_00715630; iTF_00150304; iTF_00177899;
- 80% Identity
- iTF_00431953;