Dpas038327.1
Basic Information
- Insect
- Delias pasithoe
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_010014985.1
- Location
- JAAAKR010000458.1:55555-61848[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.34 1.8e+04 -3.8 0.2 60 74 61 75 27 90 0.51 2 3 8.2e-78 4.3e-73 247.8 23.9 1 297 109 387 109 390 0.90 3 3 1 5.2e+04 -6.8 13.2 2 150 387 432 384 460 0.49
Sequence Information
- Coding Sequence
- ATGTGTAATAAAACAGAGATGGCTACTCCTGAAAATAGTGACGAGGAAAGCGGCGAGGCCTTCACTGACGGTGATTTTGACGACACTGATGATGAAGTGATTGTACGCAAGGTGAATGCTAAAATTGCAACAATAGCTATCAATGAAACCGTCAATACAACCATTAGCAGTTGTAATACAGATGAAGTATTAAAAAGCATAGAGAGTCGTGAAACAAGCAACGATTTGGAAAGTGAAAATGTAATAGTTGTGGCGAGGGATTCtgatgaagaaaataataataatctatccCTAATCGGCATACTTGGAGACCAATGTAGTTACgCTGAACAACGATTGGCTGCGCGGCGAGCTGCGAGGGCGGAAGCTCGTGAGATCCGCATGAGAGAGTTGGAGAGACAGCAGAGGGAACAGGAGGACCATGCCGACAAGGCTTATGACATGTATGCAGAAACTGTGGGACGTCGTGGTGCAACCCGATTAGCGTCTCTCAGCCCGGCGGGCCTACATTCGCCGAGGAGGAGTTCAGAAGACTCTGATGAAGTACTCAGCATTAAGGATTTGAGGTACGAATTAAAAGAAGTGGAAGAGAAATTTCGCAAAGCAATGATATTAAACGCTCAGTTGGACAATGATAAGGCAGCACTCGGGTATCAGCTAGAGCTGCTTAAAGATAGAATAGAGGAATTGCAAGAAGAGTATGCGCAGTTACAGCGCGAACACAAAGAGAAGTGCTCCGCGCACGAGCGGCTGAAGCGCGACCACGCGGCCCTCGAGCGCGAGGTGAAGTGCGCGCGGGACGCGGTGCGGGCGAGGGACGCGGCGGTGGAGAGCGCGGGCTACACCTTTGTCGAGTCGGGCGATGGCCAGGCGCAAGGGTTTGGTGCTGTGCCGCCGCTCGCGCTGGTCTCGCATCATTCAAATGCCTTGCTTGAGGATGGAGGTGAAGGGACGCTTGATGTTCGGTTACAAAACTTAGTGAGCTCCAAGCAGGCCTTAGAGTCAGAAGTCCGGAAGCTCAAGCTACAACTGAACGAGGAACGCGCCGCCAGGCAAAATGGCGTCGCCGCGCACCACGACAAGGACTACGAGAACGATTTGGAAACTTTAAGAAAGTCAGTGTCGGAAGCAAAGGGACGTGCAGCGCGGGCGGAGGCGGAAGCGGCGCTGCAATCAGGCGCTGTCGCCCGGCTCGAGGCGCAAGTGCAAAGGCTCAGGGCTAGGCAAGACCACCAAGACGAACACGAGGAGATGCTTAAGCAGGAGAAGCGGCGCCTGCAGAGAGAGGCACGCGAAGCACTCAATCGAGTTGAGGAATTGGAGACAGAGAACAGTCATTTAACAAAACGGCTAGACAAACTGAAGAACGCCAAGTCAGCACTTCTAAAGGAGCTGTGA
- Protein Sequence
- MCNKTEMATPENSDEESGEAFTDGDFDDTDDEVIVRKVNAKIATIAINETVNTTISSCNTDEVLKSIESRETSNDLESENVIVVARDSDEENNNNLSLIGILGDQCSYAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGATRLASLSPAGLHSPRRSSEDSDEVLSIKDLRYELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEEYAQLQREHKEKCSAHERLKRDHAALEREVKCARDAVRARDAAVESAGYTFVESGDGQAQGFGAVPPLALVSHHSNALLEDGGEGTLDVRLQNLVSSKQALESEVRKLKLQLNEERAARQNGVAAHHDKDYENDLETLRKSVSEAKGRAARAEAEAALQSGAVARLEAQVQRLRARQDHQDEHEEMLKQEKRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00878867;
- 90% Identity
- -
- 80% Identity
- -