Basic Information

Gene Symbol
ct
Assembly
GCA_946251825.1
Location
CAMIUB010000012.1:105574-123192[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1.6 3e+04 -3.9 0.0 44 57 145 158 142 159 0.82
2 4 1.1e-26 2e-22 80.0 0.0 3 71 519 588 517 594 0.94
3 4 4.4e-32 8.1e-28 97.3 0.0 3 77 955 1030 953 1032 0.96
4 4 5.8e-31 1.1e-26 93.7 0.0 3 77 1176 1251 1174 1253 0.96

Sequence Information

Coding Sequence
ATGATGGTGTCTCCTACCGCACAATCCCAGCAGAGAGAACAGAGAAGTCCTTACGTGACACAGGCTGTAGATATCTACGAGTATATTAAAGCACTTATCGCTGAGGTTAACCGACTGCAAGCCCTCCACGAAACACACATTGTACAAATACAAAGACTTGAAGATAATCTAGAAGCGAAACGTCAACACATTCTGAGACTTGAGGCTCGTTTACAGACAGAATCACAACATCAACCACAAACATTCAAAAGCTCCGAAGTTTCTGCTGTCGCATCCGAGTGCCCAGAAGAGATCCGAGATGAGACGGGATCCGCTTCGATAGTTTCCTCCGAAACATCGACGGCCGTCGAAGACATTCAAATAAAAAAGGAAAACCAATTACCATCAACGGCAGACGACATCACAAGTCATTCAGTGGCAGCTGTGGCTGTTGTCAATGAACCCAAACAGTTTCAAGAACTTTTGACCGAAAAAAACAAGACGTTGTCGATCGTAGCTCATGCTTCGAGTGAAGCGCTGAAAACCGACGGAATTTCCAGTGATACATCTGTCGCAGCATTAGACTCAGACACAATCAAGACTTCTGATAGCGAAGCTGCAGCATGCGAGATCTCTAACAATGACCCAGATGCAATTCTTCAGCATCAGCAGGATGTGCAGACTCCATGCGATTCAGCGTCTGCATCAGACCAGATTTCGTCGTCAAATTTCCCAAATGTCGATCAGTTTGGTTCGCTGCTTGGTGGTGAGTTGGTAAATTCATACTGGCGTCGTGGCTTCGACCACCTGCCATTAGCTCCACCACCTTCGATGCCCTCGCAGCAGACATCTCCAGCAACAACCGCCGCATCCGCTGCAATTTCGATAGCACCACACCCTCCACCATCAATAGCAGCAACACATCCGACCTCTAAAACGCCAACATCGATTTTCCAAAATTTCCCATCAATTCTTTCGTGCCGATCGCCTCCACCACTCCCATTGTCGGTCACAGGACCATCAACCACAACTCTTTTGAGTCAGCTAGTCAATTCAACCTTCTCATCGAATTCAACTCCTTCTCTTCGAATAGATTCTCATTCAGCGTCGCTGACTACGACTACGGCCGCACACCTTCAACAGCCTCCATTACACCACCACCAGCATCTACATCATCAGCTTCCAGGCATTCAGCATCATCAGCAACAGCAACAGCAACATCACCAGGACTTCGAGAAGGCAAATAGCCATCACGATTCCTCGTCAACAGCAAGCACGCCAAATCTCCAAGACCAGCGTTCCAATGATGGACACATGAGTGGCTCCAAATCCGCCAAAGCTCAAGAAGATAACAATAACTCACTGGGCTCCATGGCCCACCTTCCACCTGCATTTCTACCCGGTTTGCAATTCCAATTTCAAGATCGCGGTCATTTCCGCTTCGCCGAAGACATCCAGCTCCCACCTGGAGCCTCTATGGCTGGCCGCCTGGGAGAATCCCTCATTCCCAAGGGCGATCCCATGGAAGCCAAGCTCCAAGAAATGCTCCGCTACAACATGGACAAGTACGCCAATCAAAGTTTAGACACGCTCCACATATCACGTCGAGTTCGAGAGCTGCTCTCAGTGCACAATATCGGACAGAGACTCTTCGCCAAGTACATCCTCGGACTATCACAAGGCACCGTGTCCGAATTGCTGTCCAAACCAAAGCCCTGGGATAAACTGACTGAAAAAGGCCGTGACAGCTACCGCAAAATGCACGCCTGGGGATGTGATGATAACGCTGTGATGTTGCTTAAGTCTCTCATTCCCAAAAAAGATTCCGGCATTCCTCAATATGGACGAAATGAAGACTCCATGTCGGATGATCGTATTGCACACATTTTAAATGAAGCTTCCAGCCTTTTGAAGACCCCTCAAGGACAAGGTTCACAATTGCAACAGCAAATGAAACATGAATCTCAGCGTATTCAACAGCAACAATCATCATCTCTTGATGATGAACAGAGCAACGACGAATCGAAATCACCCCATGCATCTTGTACGTCACCATTCTATAAAGACTCCCCAGTgcaacaacagcaacagcagcaacaacagcaacaacaacaacagcaacaacagcagcagcagcttcagcaacgtcaagagccccagcgtcgaaagCCCGATGAAATGTCCCAAGATAACATGGCAAGAATCTACCAAGAAGAGCTGCAAAAGATCATGACCCGCACTTCACGTGACACATTTCCAAGTTTTCTATTTCCACATTTTTTCAGTGCGACTGGTGGCCTTCCGCCCACCAATAGTGCATTGCCACCCGATGATATTCGAATGGCTTTGGAAGCCTACCACCGTGAGATGGCCAAGTTACAGCAGAACAACAGTGGCAATATACCGAATTTTCCGAATTTTTCCAGCTTGATGGCTCTGCAACAACAAGTGCTGAACGGGGCACAAGATCTTTCCGTCCCGAAGGAAAACGAAATCAAAGTTAACGGCCAACGACACTCAATGGAAAGCTGCGATTCCTCCTCCAATCAAACCAAAGAAGCCAACGAAGAAGCCGCGCATCGTCACTCAAGTGCATTTAGCTTAGTTCGCCTTAAGCCGGATAATGTGCCCGCACAAAACTCTAACTCAAATTCCAATACAAATACCAATTCAGCTGCTCCTAGTCCACTAAGCAATTCCATACTTCCTCCGGCTATGACAACAACTGAAGACTTCTCCGCAGCTGCCAGTCCGCTTCAGAGGATGGCGTCAATTACAAACTCTTTGATTACACAGCCTCCAGTAACGCCACACCATACGCAGCCGCAAAGACCCACCAAAGCGGTATTACCACCAATCACTCAACAACAATTCGACATGTTCAACAACTTGAACACCGAAGATATCGTCCGTCGAGTGAAGGAAGCCTTGTCGCAATACTCAATAAGTCAGAGATTATTTGGCGAATCCGTTTTAGGTTTATCACAAGGATCGGTTTCCGACCTTCTTGCCCGACCAAAACCCTGGCATATGCTTACGCAGAAAGGCCGTGAACCCTTTATTCGAATGAAAATGTTCTTGGAAGATGAAAATGCGGTACACAAACTTGTAGCTAGTCAATATAAGATAGCTCCCGAGAAATTGATGCGGACTGGAAGTTACAGTGGAAGTCCCCAAATACCACAGGGGCTTGCGAACAAAATGAACAGCATTCCCATGCAAAAGATGATGAACGACCTGAAAATGGAACCTCAGGCACAACATATTATGCAGCAAATGCAACATATACAAGCAGCTTCCGCAATGGCTGCTGCCGCTGCTGCTGGCCAAATGCAAAATGCTCAACATCAAGGAATGTTGTTAACAACCCCAGGGCTTCCACCCCAGCACGCAATAAGTTTGCAGCAAGCCGCTGCTAACGCAGCTGCTGCCAGTGAAAAGAAGCCTATGATGATGCCAATCCACTCACCACATCAAGCCAACGCTATGCGGAGCAGCATGCACCAACACATGTCACCGACAGTTTACGAAATGGCAGCCCTCACTCAAGACCTGGACACTCAGGTTATAACCACAAAAATAAAGGAAGCTCTCCTTGCAAATAATATCGGCCAGAAAATTTTCGGCGAAGCAGTTTTGGGATTGTCTCAAGGATCTGTTTCGGAGCTGCTATCAAAACCAAAACCGTGGCACATGCTGAGCATAAAAGGTCGAGAACCCTTTATTCGTATGCAACTTTGGCTTTCAGACGCAAACAATGTTGAACGGCTGCAGGTACTTAAAAACGAACGTCGTGAAGCAAGCAAACGACGACGATCTACAGGTCCCAACCAGCAAGACAACAGTTCAGATACAAGTAGCAATGACACTGCTGACTTCTACACTAGTAGCCCTGGTCCCGGTTCCGTTGGCTCGGTTGGAGCACCACCGAACAAAAAGCAACGTGTTCTTTTCTCCGAAGAACAAAAAGAAGCACTTCGCCTAGCCTTTGCTCTGGATCCATATCCCAATGTGGGAACCATTGAATTTCTAGCCAATGAATTGGGACTAGCAACGCGAACCATCACAAACTGGTTCCATAATCACCGGATGCGCCTCAAGCAGCAGGTGCCGCACGGCCAGCCCTCAGAACCGGTCCCAAGTCGAGAAAATACCAACGCAACACCTTTCGATCCAGTGCAATTCCGTATACTCCTCAATCAAAGACTGATGGAATTGCAAAAAGAACGCATGGGTCTGAGTGGCGCCCCCATACCCTACCCACCGTACTTTGCCGCCAATCCAAATTTGGCGGCTCTAATTAGCCGTGGTTTGCTTCCCGGTGGAACAGAACCTGACTTACAAGCACTAAACAATGCCTTCAAGGAACAAATGAGTGGTCTTGACCTTTCTCTTAAACGAGAGAGAGACGGAGACTATGACGACGATGGCGAAGATGAATCCCATCTTTCTGACAATGAGTCCATAAATGAAAGTGACGAAAAGTCAGAGATGAGTGAAACACCGAGGTCTTCTTTGTATGGTGCCATGGGGCAGTCTCGAACATCACGACGGAAGCCAGCTGCCCCTCAGTGGGTTAATCCTGACTGGCAAGGCGATGCCAAAACAGGATTAATGCCTCCAACCGTTCCTGGAGGTGCCACTGATAAAGAAGTTATCATAAACGGTGTTTGTGTAATGCAACAACAAGCTTCGGACTATAGCCGTAAATCCGGAAATGGAGAAGATGACGAAGAATGCGCCTCCGATGCCAACGATGAAGAGCCAACGACCCATCATCGCGGTCAACCCTTGGACTGTGAAGACACTCCTGCCGATATCGACCAGAGGTTCATGGAACCCGAAGTTCGAATTAAGCAGGAAGAAGACTGTGACAGCAACGATAGCCATCAAGATAACTCGGACTTAAGAAAACAACAACACCACCAACGGGACGACGAAGACGACACCCCTGGTGCATGGAATTATTAA
Protein Sequence
MMVSPTAQSQQREQRSPYVTQAVDIYEYIKALIAEVNRLQALHETHIVQIQRLEDNLEAKRQHILRLEARLQTESQHQPQTFKSSEVSAVASECPEEIRDETGSASIVSSETSTAVEDIQIKKENQLPSTADDITSHSVAAVAVVNEPKQFQELLTEKNKTLSIVAHASSEALKTDGISSDTSVAALDSDTIKTSDSEAAACEISNNDPDAILQHQQDVQTPCDSASASDQISSSNFPNVDQFGSLLGGELVNSYWRRGFDHLPLAPPPSMPSQQTSPATTAASAAISIAPHPPPSIAATHPTSKTPTSIFQNFPSILSCRSPPPLPLSVTGPSTTTLLSQLVNSTFSSNSTPSLRIDSHSASLTTTTAAHLQQPPLHHHQHLHHQLPGIQHHQQQQQQHHQDFEKANSHHDSSSTASTPNLQDQRSNDGHMSGSKSAKAQEDNNNSLGSMAHLPPAFLPGLQFQFQDRGHFRFAEDIQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQSLDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDSGIPQYGRNEDSMSDDRIAHILNEASSLLKTPQGQGSQLQQQMKHESQRIQQQQSSSLDDEQSNDESKSPHASCTSPFYKDSPVQQQQQQQQQQQQQQQQQQQQLQQRQEPQRRKPDEMSQDNMARIYQEELQKIMTRTSRDTFPSFLFPHFFSATGGLPPTNSALPPDDIRMALEAYHREMAKLQQNNSGNIPNFPNFSSLMALQQQVLNGAQDLSVPKENEIKVNGQRHSMESCDSSSNQTKEANEEAAHRHSSAFSLVRLKPDNVPAQNSNSNSNTNTNSAAPSPLSNSILPPAMTTTEDFSAAASPLQRMASITNSLITQPPVTPHHTQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMNSIPMQKMMNDLKMEPQAQHIMQQMQHIQAASAMAAAAAAGQMQNAQHQGMLLTTPGLPPQHAISLQQAAANAAAASEKKPMMMPIHSPHQANAMRSSMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTADFYTSSPGPGSVGSVGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPSEPVPSRENTNATPFDPVQFRILLNQRLMELQKERMGLSGAPIPYPPYFAANPNLAALISRGLLPGGTEPDLQALNNAFKEQMSGLDLSLKRERDGDYDDDGEDESHLSDNESINESDEKSEMSETPRSSLYGAMGQSRTSRRKPAAPQWVNPDWQGDAKTGLMPPTVPGGATDKEVIINGVCVMQQQASDYSRKSGNGEDDEECASDANDEEPTTHHRGQPLDCEDTPADIDQRFMEPEVRIKQEEDCDSNDSHQDNSDLRKQQHHQRDDEDDTPGAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2