Basic Information

Gene Symbol
ct
Assembly
GCA_963921185.1
Location
OY992533.1:40535466-40597214[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.74 2.9e+04 -2.8 0.0 43 57 416 430 413 432 0.83
2 4 1.3e-26 5.2e-22 79.7 0.0 3 71 789 858 787 864 0.94
3 4 5.2e-32 2.1e-27 97.0 0.0 3 77 1228 1303 1226 1305 0.96
4 4 7e-31 2.8e-26 93.4 0.0 3 77 1449 1524 1447 1526 0.96

Sequence Information

Coding Sequence
ATGGTACTTCCGAAGGTTCAAGATCAAGCGGCATTCTTTATAGTCGCCAACTCAATTGCTTTAACTTTGGTGTCGAACAAGAAAGCTCTAAGTCCCTACTGTCAAAAGACAATATCAATTGTACCTACGTGTGGTTGGAAAAGAGCAACATTGGCTGAAAAAGAAGTAAATACTTTAAAAGAACAATTGTCAACAAGTTCGActgcagcaacaacaacatctaCGTCATCGACAACAACCACAACAGCATCTTCGATCCATTCTTCGCCACCATCTCCATCTTCGGTGAGCACAATCCCAATaccaaatataaaattaatatctccaacgataaacaacaacaatagcTACAACAATAATAACAAATTGAACAGTGTTGCCATATCACAGCATTTGCACCAGAACGGAAACTTGCTGGCAGCCACACCATCGCCGTCTCCGCCATTATCTGAAAACGGTAGCACACTTAACGGATGCCTTAATTCGGCAAAGTTACTCTTCAATCATAATCAAATAATGGACACAACATCAACTGCGTCAAATACAGCTACTGATCTTTCTACGGTATTGGCAGCGACCACTAACCCAACCCCCACCAGCGCCACATCAACTATAGGTGCAACAATAACAGACGCTAGCAAACTTATAACTGCAATGACCGCCGAAATGAATCTCCACCAGGACTCTAGCGAATCGGCAACACTGGCAAGCAATCAAATGTCAAATCGATCGCACAGCCCGCTGTTATCAGCGCTTGAGGGCACTAGTGGCATCGAGGCAACaagaaacaataataataatagtactAGTAACAATAATAATACCAATACAAATAGTAATAGCAGTAGTAgttgtaataataattttgctGATGAATTGGCTGCCAAAGAAAAAGAGATTAAAGCACTTATCGCTGAGGTTAACCGACTGCAAGCCCTCCACGAAACACACATTGTACAAATACAAAGACTTGAAGATAATCTAGAAGCGAAACGTCAACACATTCTAAGACTTGAGACTCGTTTGCAGACAGAATCACAACAGCAACCACAACCATTCAAAAGCTCCGAAGTTTCTGCTGTCGTATCTGAATCATGCCCGGAAGAGATCCGAGATGAGGCGGGATCCGCTTCGATCGTTTCCTCTGAAACATCGGCGGCAGTCGAAGacgttcaaataaaaaaggaaaaccaATTACCATCAACGGCAGGCGACATCACAATTCATTCAGTGGCAACTGTGGCTGTTGTCAATAACCCCAAACAGTTCCAAGAACTTTTGACCGAGAAAAACAAGACGCTGCCGGTCGTAGCTCATGCTTCGAGTGAAGAGCTGAAAACCGAAGGAATTTCCAGTGATACATCTGTCGCAGCGTTAGACTCAGGCACAATCAAGACTTCTGATAGCGAAGCTGCAGCATGCGAGACCTCTAACAATGACCCAGATGCAATTCTTCAGCATCAACAGGATTTGCAGTCTCCATGCGATTCAGCGTCTGTATCAGACCAGATTCCGTCGTCAAATTTCCCAAATGTCGATCAGTTTGGTTCGCTGCTTGGCGGTGAGTTGGTTAATTCATACTGGCGTCGTGGCTTCGACCACCTGCCATTAGCGCCACCACCTTCGATGCCCTCGCAACAGACATCTCCAGCAACAACCGCCGCCTCCGCTGCAATTTCGATAGCACCACACCTACCACCATCAATAGCAGCAACACATCCAACCTCTAAAACGCCAacatcgatttttcaaaatttcccaTCAATTCTTTCGTGCCGATCGCCTCCACCACTCCCATTGTCGGTCACAGGACCATCAACCACAACTCTTTTGAGTCAGCTAGTCAATTCAACTTTCTCATCGAATTCAACTCCTTCTCTTCGAATAGATTCTCATTCAGCGTCGGTGACCACGACTACAGGCGCACACCTACAACAGCCTCCATTACACCACCACCAGCATCTACATCATCAGCTTCCTGGCATTCAGCATCATCAGCAACAGCAGCATCACCAGGACTTCGAAAAGGCAAATAGTCATCACGATTCCTCGTCAACAGCAAGCACGCCCAATCTCCAAGACCAGCGTTCCAATGATGGACACATGAGTGGTTCCAAATCCACCAAAGCTCAAGAAGATAACAATAACTCACTGGGCTCCATGGCTCACCTTCCACCTGCATTTTTACCCGGTTTGCAATTCCAATTTCAAGATCGCGGTCATTTCCGCTTCGCTGAAGACATCCAGCTCCCACCTGGAGCCTCTATGGCTGGACGCCTGGGAGAATCCCTCATTCCCAAGGGCGATCCCATGGAAGCCAAGCTCCAGGAAATGCTCCGCTACAACATGGACAAGTACGCCAATCAAAGTTTAGACACGCTCCACATATCACGTCGTGTACGAGAGCTGCTCTCAGTGCACAATATCGGACAGAGACTCTTCGCCAAGTATATCCTCGGACTTTCACAGGGTACCGTGTCCGAATTGCTGTCCAAGCCAAAGCCCTGGGATAAACTGACTGAAAAAGGCCGTGACAGCTACCGCAAAATGCACGCCTGGGGATGTGATGATAACGCTGTGATGTTgcttaagtctctcattcccaAAAAAGATTCTGGCATTCCTCAGTATGGACGAAATGAAGACTCCATGTCGGATGATCGTATTGCACACATTTTAAATGAAGCTTCCAGCCTTTTGAAGACCCCTCAGGGACCAGGTTCACAATTGCAACAACAAATGAAACATGAATCTCAGCGTATTCATCAGCAACAATCATCATCTCTTGATGATGAACAGAGCAACGACGAATCGAAATCACCGCATGCATCTTGTACGTCACCATTCTATAAAGACTCCCCAGtgcaacagcagcaacagcagcaacaacaacaacaacaacaccaacaacaaacacaacaacaacagcagcagcttCAGCAGCGTCAGGAGCCCCAGCGTCGAAAGCCCGACGAAATGTCTCAAGATAATATGGCGAGAATCTACCAAGAAGAGCTGCAAAAGATCATGAGCCGCACTTCACGTGACAcatttcccagTTTTCTGTTTCCACACTTTTTCAGTGCGACTGGTGGCCTTCCGCCCACCAACAGTGCATTGCCACCCGATGATATTCGAATGGCTTTGGAAGCCTACCACCGTGAGATGGCCAAGTTGCAGCAGAACAACAGTGGCAATATAcccaatttttcgaatttttccaGCTTGATGGCTCTGCAACAACAAGTGCTGAACGGGGCACAGGATCTATCCGTCCCGAAAGAAAACGAAATCAAAGTTAACGGCCAACGACTCTCAATGGAAAGCTGCGAATCCTCCTCCAATCAAACCAAAGAAGCCAATGAAGAAGCCGCGCATCGTCACTCAAGTGCATTTAGCTTAGTTCGCCTTAAGCCGGATACTGTACCCCCACAAAACTCTAACTCCAATTCCAATACAAATACCAATTCAGCTGCTCCTAGTCCACTTAGCAATTCCATACTTCCTCCGGCTATGACAACAACTGAAGACTTCTCCGCAGCTGCCAGTCCTCTTCAGAGGATGGCGTCAATTACAAACTCTTTGATTACACAGCCTCCAGTTACGCCACATCATACGCAGCCACAAAGACCCACCAAAGCGGTATTACCACCAATTACTCAACAACAATTCGACATGTTCAACAACTTGAACACCGAAGATATCGTCCGTCGAGTGAAGGAAGCTTTGTCGCAATACTCCATAAGTCAGAGATTATTTGGCGAATCCGTTCTAGGGTTATCACAAGGATCGGTTTCCGACCTTCTTGCCCGACCAAAACCCTGGCATATGCTTACGCAGAAAGGCCGTGAACCCTTTATTCGGATGAAAATGTTCTTAGAAGATGAAAATGCGGTACACAAACTGGTAGCTAGTCAATATAAGATAGCTCCCGAGAAATTGATGCGGACTGGAAGTTACAGTGGCAGTCCACAAATACCGCAGGGGCTTGCAAACAAAATGAACAGCATTcccatgcaaaaaatgatgaacGACCTGAAAATGGAACCTCAGGCACAGCACATAATGCAGCAAATGCAACACATACAAGCAGCTTCCGCAATGGCTGCTGCCGCTGCTGCAGGACAAATGCAAAACGCTCAACATCAGGGAATGTTGTTGACAACCCCAGGGCTTCCGCCGCAGCACGCAATAAGCTTGCAGCAAGCCGCTGCTAACGCAGCTGCTGCCAATGAAAAGAAGCCCATGATGATGCCAATTCACTCACCACATCAAGCCAACGCTATGCGGAGCAGCATGCACCAACACATGTCACCGACAGTTTATGAAATGGCAGCCCTCACTCAAGACCTGGACACTCAGGTTATcaccacaaaaataaaagaggctCTCCTTGCAAATAATATCGGCCAGAAAATTTTCGGTGAAGCAGTTTTGGGATTGTCTCAAGGATCGGTTTCGGAGCTGCTATCAAAACCAAAACCATGGCACATGCTGAGCATAAAAGGTCGGGAACCTTTTATTCGTATGCAACTTTGGCTTTCGGACGCAAACAATGTTGAACGGCTGCAGGTACTTAAAAACGAACGTCGTGAAGCTAGCAAACGACGACGATCTACAGGTCCCAACCAGCAAGACAACAGCTCAGATACTAGTAGCAATGACACTGCTGACTTCTACACGAGTAGCCCTGGTCCCGGTTCGGTTGGCTCGGTTGGAGCACCACCAAATAAAAAGCAACGTGTTCTATTCTCCGAAGAACAAAAAGAAGCACTTCGCCTAGCCTTTGCTCTGGATCCATATCCAAATGTGGGAACCATTGAGTTTCTAGCCAATGAATTGGGTCTGGCAACGCGAACCATCACAAACTGGTTCCATAATCACCGAATGCGCCTCAAGCAGCAGGTGCCGCACGGCCAGCCCTCTGAACCGGTCCCAAGTCGAGAAAATACCAACGCAACACCTTTCGATCCAGTCCAATTCCGTATACTCCTCAATCAAAGACTGATGGAATTGCAAAAAGAACGTATGGGCCTCAGTGGTGCCCCCATACCCTACCCACCGTACTTTGCTGCCAATCCAAATTTGGCGGCTCTAATTAGCCGTGGTTTGCTTCCCGGTGGAACCGAACCTGACCTACAAGCACTTAACAATGCCTTCAAGGAACAAATGAGTGGTCTTGACCTTTCCCTTAAACGAGAGAGAGACGGAGACTACGATGACGATGGCGAAGACGAATCCCATCTTTCTGACAATGAGTCCATAAATGAAAGTGACGAAAAGTCAGAGTTGAGTGAAACACCAAGGTCTTCTTTGTATGGCGCCATGGGTCAGTCTCGGACATCACGACGGAAGCCAGCTGCCCCTCAGTGGGTTAATCCTGACTGGCAGGGCGATGCTAAAACAGGATTAATGCCTCCAACCGTTGCTGGTGGTGCCACTGACAAAGAAGTCATCATAAACGGTGTTTGTGTAATGCAACAACAAGCTTCTGACTATAGCCGAAAATCAGGAAACGGAGAAGACGACGAAGAATGCGCCTCCGATGCCAACGATGAAGAACCAACGACCCATAATCGCGGCCAGCCTTTGGACTGTGAAGACACTCCTGCCGATATCGACCAGAGGTTCATGGAACCCGAAGTTCGCATTAAGCAAGAAGAAGACTGTGACAGCAACGATAGCCATCAAGATAACTCGGAcataagaaaacaacaacaccacCAACGGGACGAAGAAGACGACACCCCTGGTGCAtggaattattaa
Protein Sequence
MVLPKVQDQAAFFIVANSIALTLVSNKKALSPYCQKTISIVPTCGWKRATLAEKEVNTLKEQLSTSSTAATTTSTSSTTTTTASSIHSSPPSPSSVSTIPIPNIKLISPTINNNNSYNNNNKLNSVAISQHLHQNGNLLAATPSPSPPLSENGSTLNGCLNSAKLLFNHNQIMDTTSTASNTATDLSTVLAATTNPTPTSATSTIGATITDASKLITAMTAEMNLHQDSSESATLASNQMSNRSHSPLLSALEGTSGIEATRNNNNNSTSNNNNTNTNSNSSSSCNNNFADELAAKEKEIKALIAEVNRLQALHETHIVQIQRLEDNLEAKRQHILRLETRLQTESQQQPQPFKSSEVSAVVSESCPEEIRDEAGSASIVSSETSAAVEDVQIKKENQLPSTAGDITIHSVATVAVVNNPKQFQELLTEKNKTLPVVAHASSEELKTEGISSDTSVAALDSGTIKTSDSEAAACETSNNDPDAILQHQQDLQSPCDSASVSDQIPSSNFPNVDQFGSLLGGELVNSYWRRGFDHLPLAPPPSMPSQQTSPATTAASAAISIAPHLPPSIAATHPTSKTPTSIFQNFPSILSCRSPPPLPLSVTGPSTTTLLSQLVNSTFSSNSTPSLRIDSHSASVTTTTGAHLQQPPLHHHQHLHHQLPGIQHHQQQQHHQDFEKANSHHDSSSTASTPNLQDQRSNDGHMSGSKSTKAQEDNNNSLGSMAHLPPAFLPGLQFQFQDRGHFRFAEDIQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQSLDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDSGIPQYGRNEDSMSDDRIAHILNEASSLLKTPQGPGSQLQQQMKHESQRIHQQQSSSLDDEQSNDESKSPHASCTSPFYKDSPVQQQQQQQQQQQQHQQQTQQQQQQLQQRQEPQRRKPDEMSQDNMARIYQEELQKIMSRTSRDTFPSFLFPHFFSATGGLPPTNSALPPDDIRMALEAYHREMAKLQQNNSGNIPNFSNFSSLMALQQQVLNGAQDLSVPKENEIKVNGQRLSMESCESSSNQTKEANEEAAHRHSSAFSLVRLKPDTVPPQNSNSNSNTNTNSAAPSPLSNSILPPAMTTTEDFSAAASPLQRMASITNSLITQPPVTPHHTQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMNSIPMQKMMNDLKMEPQAQHIMQQMQHIQAASAMAAAAAAGQMQNAQHQGMLLTTPGLPPQHAISLQQAAANAAAANEKKPMMMPIHSPHQANAMRSSMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTADFYTSSPGPGSVGSVGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPSEPVPSRENTNATPFDPVQFRILLNQRLMELQKERMGLSGAPIPYPPYFAANPNLAALISRGLLPGGTEPDLQALNNAFKEQMSGLDLSLKRERDGDYDDDGEDESHLSDNESINESDEKSELSETPRSSLYGAMGQSRTSRRKPAAPQWVNPDWQGDAKTGLMPPTVAGGATDKEVIINGVCVMQQQASDYSRKSGNGEDDEECASDANDEEPTTHNRGQPLDCEDTPADIDQRFMEPEVRIKQEEDCDSNDSHQDNSDIRKQQHHQRDEEDDTPGAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00976241;
90% Identity
iTF_00426140;
80% Identity
iTF_00427017;