Basic Information

Gene Symbol
ct
Assembly
GCA_951394125.1
Location
OX596031.1:43279342-43359523[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.3e-26 1.7e-22 79.7 0.0 3 71 796 865 794 871 0.94
2 3 5.3e-32 6.9e-28 97.0 0.0 3 77 1240 1315 1238 1317 0.96
3 3 7.1e-31 9.2e-27 93.4 0.0 3 77 1458 1533 1456 1535 0.96

Sequence Information

Coding Sequence
ATGCAGCCAACATTGCCACAAACAGCCGGGACAGCCGATATGGATTTGACGGCTGTTCAATCAATGGATtggttatttaaaaaggaaCGAATTTATCTATTGGCACAATTTTGGCAACAGAGAGCTACATTGGCtgaaaaagaagtaaatacTTTAAAAGAACAATTGTCAACAACTTCgattgcaacaacaacaacatctacATCATCGACGACAACAACAGCATCTTCGATCCATTCGTCGCCATCTTCTCCATCTTCGGTGAGCACAATCCCAAtaccaaatataaaattatcatCTCCAAcgataaacaacaacaatagtttcaataataataacaaattgaaCAGTGTTGCCATATCCCAGCATTTGCATCAGAACGGTAATTTGCTGGCAGCCACACCATCGCCGTCTCCACCATTATCTGAAAACGGTAGCACACTTAACGGATGCCTTAATTCGGCAAAGTTAATTTTCAATCATAATCAAATAATGGACACAACATCAACTGCATCAAATACAGCTACTGATCTTTCTGCGGTATTGgcagcaacaacaaccactATCCCAAATCCCACCAGCGCCACAACAATAGGTGCAACAATAACAGACGCTAGCAAACTTATTACGGCAATGACCGCCGAAATGAATCTCCACCAAGACTCCAGCGAATCGGCAACACTGGCAAGCAATCAAATGTCAAATCGATCCCACAGTCCGCTCCTGTCAGCGCTAGAGGGAACTAGTGGCATCGTCGAGGCAACaagaaacaacaataataatagcaCTAGTAACAATAATAATACCCATACAAATAGTAGTAATAGCAGTAGTagttgtaataataattttgctgaTGAATTGGCTGCCAAAGAAAAAGAGatTAAAGCACTTATCGCTGAGGTTAACCGACTGCAAGCCCTCCACGAAACACACATTGTACAAATACATAGACTTGAAGATAATCTAGAAGCAAAACGTCAACACATTCTGATACTTGAGACACGTTTACAGACAGAGACACAACAGCAACCACAGCCATTCAAAAGCTCCGAAGCTGCTCCTGCTGTTGCACCACCCCAATCATCATGCCTGGAAGAGATCCGAAATGAGACGGAATCCGCTTCGATCGTTTCCTCTGAACCATCATCGGCGGCAGTCGaagatattcaaataaaaaaggaaaaccaATTACCATCAACGGCAGGTGACATCACAGCTCATTCAATGGCAGCTGCGGCAGTTGCCGTCAATGACCCCAAACAGTTGCAAGAACTTTTGATCGAGAAAACTAAGACGCTGGCGGCCACAGCTCATGCTTCGAGTGAAGCGTTGAAGGCTGAAGGAATTTCCAGTGATACAACCGTCGCAGCATCAGACCCAGACCCAGACCCAGACACAAACATAATAAAGACTTCTGATAACGAAGCTGCAGCATGCGAGGTCTCTAACAATGACCCAGATGCAAACATTCAGCATCAGCAGGATTTACAGTCTCCATGCGAATCAGCGGCTACATCAGACCAGATTCCTTCGTCAAATTTTCCAAGTGTCGATCAGTTTGGTTCGCTGCTTGGCGGTGAATTGGTAAATTCATATTGGCGTCGTGGCTTCGACCACCTGCCATTAGCGCCACCACCTTCGATGCCCCCGCAACAAACATCTCCAGCAGCAACAACCGCCGCCTCTGCTTCAATTTCGATAGCAGCACACCCATCGCCATCAATTGCAGCAACACATCCAACCTCTAAAACGCCAACATCGATTTTCCAAAATTTCCCATCAATTCTTTCGTGCCGATCGCCTCCACCACTCCCATTGTCCGTCACAGGACCATCAACCACAACTCTTTTGAGTCAGCTAGTCAATTCAACCTTCTCATCGAATTCAACTCCTTCTCTTCGAATAGATTCCCATTCAACGTCGGTGACTACGACTACGGGCGCTCACCTGCAACAACCTCCACTACACCACCACCAGCATCTACATCATCAGCTTCCTGTCCTTTCACATcatcagcaacagcagcatCACCAGGACTTTGAGAAGGCAAACAGCCATCACGATTCCTCGTCAACAGCCAGCACGCCCAATCTGCAAGACCAGCGTTCGAATGATGGGCACATGAGTGGCTCCAAATCCACGAAAGCTCAAGAGGATAACAACAACTCACTTGGTTCCATGGCTCACCTTCCACCTGCTTTTATACCCGCTTTGCAATTCCAATTCCAAGATCGCAGTCATTTCCGCTTCGCCGAGGACATCCAGCTACCACCTGGAGCCTCTATGGCTGGTCGCCTGGGAGATTCCCTCATTCCCAAAGGCGACCCTATGGAAGCTAAACTCCAGGAAATGCTCCGCTACAACATGGACAAGTACGCGAATCAAAGTTTAGATACGCTCCACATATCACGTCGCGTTCGAGAGCTGCTCTCAGTGCACAACATCGGACAGAGACTCTTCGCCAAGTATATCCTCGGACTATCACAGGGTACTGTGTCCGAATTGCTGTCCAAGCCAAAGCCCTGGGATAAACTGACTGAAAAAGGCCGTGACAGCTACCGCAAAATGCACGCCTGGGGATGTGATGATAACGCTGTGATGTTGCTTAAGTCTCTCATACCCAAAAAAGATTCGGGCATTCCTCAATATGGACGAAATGAAGACTCGATGTCGGATGATCGTATTGCACACATTTTGAATGAAGCTTCCAGCCTTTTGAAGACCCCTCAGGGACAAGGTTCACAGTTGCAGCAGCAAATGAAACATGAATCTCAGCGTCTTCATCAGCAACAATCATCATCACTTGATGATGAACAAAGCAATGACGAATCAAAATCACCGCATGCATCTTGTACGTCACCATTCTATAAAGATTCCCCAgtgcaacaacagcaacaacaacatcagcagcagcagcagcaacaacaacaacaacaacagcagcaacaacaacaacagaagcaacagcaacagcttCAGCTTCATCAAGAAGCCCAGCGTCGAAATGTGAAGCCTGATGAAATGTCACAAGACAAGATGGCGAGAATATACCAAGAAGAGCTGCAAAAGCTCATGACCCGCACTCCACGTGATACATTTCCAAGTTTTCTGTTTCCACACTTTTTTAGTGCGGCTGGTGGCCTTCCGCCCGCGAACAGTGCAATGCCAACCGACGATATTCGAATGGCTTTGGAAGCCTACCATCGTGAAATGGCGAAGTTACAGCAGAACAACAGTGGCAATATaccaaattttccaaatttttccagCTTGATGGCGCTGCAACAACAAGTGTTGAACGGCGCACAGGATCTATCCGTCCCGaaggaaaatgaaattaaaattaacggCCAACGACACTCAATGGAAAGCTGCGATTCCTCCTCCAATCAAACCAAAGAAGCTACTGAAGAAGCCGTGCATCGTCATTCAAGTGCATTTAGCTTAGTTCGCCTTAAGCCGGATTCTGTGCCTGCACCTAATTCCAATACAAATAACAATTCAGCTGCTCCCAGTCCACTTAGTAACACCATACTACCACCGGCTATGGCAACAACTGAGGACTTCTCCGCAGCTGCCAGTCCGCTTCAGAGGATGGCGTCAATTACAAACTCATTGATTACGCAGCCTCCAGTAACGCCTCACCACACGCAGCCACAAAGACCCACCAAAGCTGTGTTACCACCAATCACCCAGCAGCAGTTCGACATGTTCAACAACTTGAACACTGAAGATATTGTCCGTCGTGTGAAGGAAGCTCTATCGCAGTACTCCATAAGCCAGAGATTATTCGGTGAATCCGTTTTAGGGTTATCACAAGGTTCGGTTTCCGATCTCCTTGCCCGACCAAAGCCTTGGCATATGCTTACGCAAAAAGGCCGAGAACCATTTATTCGGATGAAAATGTTCTTGGAAGATGAAAATGCCGTGCACAAATTGGTAGCCAGCCAATATAAGATAGCACCCGAGAAATTAATGCGAACTGGTAGTTACAGTGGTAGTCCACAAATACCACAGGGGCTTGCGAATAAAATGAACAGCATTCCCATGCAGAAAATGATGAATGACCTGAAAATGGAGCCTCAAGCACAACACATAATGCAGCAAATGCAAGCAGCTTCTGCAATGGCTGCGGCCGCTGCTGCAGGACACATGCAAAACGCTCAACATCAGGGAATGTTATTAACTACACCGGGGCTACCGCCCCAACACGCAATTAGCCTGCAGCAGGCCGCTGCTAACGCTGCAGCTGCAAATGAAAAGAAGCCCATGATGATGCCAATTCACTCACCGCACCAGGCTAACGCTATGCGAAGCAGCATGCACCAACACATGTCACCCACAGTTTACGAAATGGCAGCCCTCACTCAAGACCTGGACACTCAGgtaattacaacaaaaataaaagaagcctTGCTTGCAAATAATATCGGCCAGAAGATTTTCGGCGAAGCAGTTTTGGGATTGTCTCAAGGATCAGTTTCCGAACTGCTCTCAAAACCAAAGCCATGGCACATGCTGAGCATCAAAGGTCGAGAGCCCTTCATTCGTATGCAACTGTGGCTTTCGGATGCGAACAATGTTGAACGGCTGCAGGTACTTAAGAACGAACGTCGCGAAGCTAGCAAACGCCGTCGATCTACAGGTCCAAATCAGCAAGACAACAGCTCCGATACAAGTAGCAACGACACTGCTGACTTCTACACTAGCAGCCCTGGTCCCGGTTCAGTTGGTTCGGTTGGAGCAccaccaaataaaaaacaacgtgTTCTCTTCTCCGAGGAACAGAAAGAAGCACTTCGCCTGGCCTTTGCCCTGGATCCGTATCCAAATGTGGGGACCATTGAATTTCTAGCCAACGAATTGGGTCTAGCAACGCGAACCATCACCAACTGGTTCCATAATCATCGAATGCGCCTAAAGCAGCAGGTGCCGCACGGCCAGCCCTCAGAGCCGGTCCCAAGTCGAGAGAATACCAACGCAACACCTTTCGATCCTGTCCAATTCCGTATACTCCTCAATCAAAGACTGATGGAATTGCAAAAAGAACGTATGGGCCTCAGTGGCGCCCCCATACCCTACCCACCGTACTTTGCTGCCAATCCAAATTTGGCGGCACTAATAAGTCGTGGTTTGCTTCCCGGTGGAACAGAACCTGATCTACAAGCTCTGAACAACGCCTTCAAGGAACAAATGAGTGGTCTTGATCTTTCTCTTAAACGAGAACGCGACGGAgactacgacgacgatggcGAAGATGAGTCTCATCTTTCTGACAACGAGTCTATCAATGAAAGTGACGAAAAGTCAGAGATGAGCGAAACACCGAGGTCTTCACTGTATGGCGCCATGGGCCAGTCTCGGACTTCACGACGGAAGCCCGCTGCTCCCCAGTGGGTTAATCCTGACTGGCAGGGTGATGGGAAAACAGGGTTAATGCCTCCAACTGTAGCTGGAGGTGGCGTCGGCGGTGGAGGTGCAACCGACAAAGAAGTCATCATAAACGGTGTTTGTGTAATGCAACAACAAGCTTCTGATTACAGCCGAAAATCGGGAAATGGAGAAGATGACGAAGAATGCGCCTCCGATGCCAACGATGAAGAACAAACAACCCATCATCGCGGTCAGCCTTCCGACTGCGAGGACGCTCCCGCTGATATCGACCAAAGGTTCATGGAACCCGAAGTTCGAATTAAACAAGAAGAAGACTGTGACAGCAACGATAGCCATCAAGATAACTTGGActtaagaaaacaacaacaccacCATCGGGATGAAGAAGACGACACCCCTGGTGCATGGAATTAttaa
Protein Sequence
MQPTLPQTAGTADMDLTAVQSMDWLFKKERIYLLAQFWQQRATLAEKEVNTLKEQLSTTSIATTTTSTSSTTTTASSIHSSPSSPSSVSTIPIPNIKLSSPTINNNNSFNNNNKLNSVAISQHLHQNGNLLAATPSPSPPLSENGSTLNGCLNSAKLIFNHNQIMDTTSTASNTATDLSAVLAATTTTIPNPTSATTIGATITDASKLITAMTAEMNLHQDSSESATLASNQMSNRSHSPLLSALEGTSGIVEATRNNNNNSTSNNNNTHTNSSNSSSSCNNNFADELAAKEKEIKALIAEVNRLQALHETHIVQIHRLEDNLEAKRQHILILETRLQTETQQQPQPFKSSEAAPAVAPPQSSCLEEIRNETESASIVSSEPSSAAVEDIQIKKENQLPSTAGDITAHSMAAAAVAVNDPKQLQELLIEKTKTLAATAHASSEALKAEGISSDTTVAASDPDPDPDTNIIKTSDNEAAACEVSNNDPDANIQHQQDLQSPCESAATSDQIPSSNFPSVDQFGSLLGGELVNSYWRRGFDHLPLAPPPSMPPQQTSPAATTAASASISIAAHPSPSIAATHPTSKTPTSIFQNFPSILSCRSPPPLPLSVTGPSTTTLLSQLVNSTFSSNSTPSLRIDSHSTSVTTTTGAHLQQPPLHHHQHLHHQLPVLSHHQQQQHHQDFEKANSHHDSSSTASTPNLQDQRSNDGHMSGSKSTKAQEDNNNSLGSMAHLPPAFIPALQFQFQDRSHFRFAEDIQLPPGASMAGRLGDSLIPKGDPMEAKLQEMLRYNMDKYANQSLDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDSGIPQYGRNEDSMSDDRIAHILNEASSLLKTPQGQGSQLQQQMKHESQRLHQQQSSSLDDEQSNDESKSPHASCTSPFYKDSPVQQQQQQHQQQQQQQQQQQQQQQQQQKQQQQLQLHQEAQRRNVKPDEMSQDKMARIYQEELQKLMTRTPRDTFPSFLFPHFFSAAGGLPPANSAMPTDDIRMALEAYHREMAKLQQNNSGNIPNFPNFSSLMALQQQVLNGAQDLSVPKENEIKINGQRHSMESCDSSSNQTKEATEEAVHRHSSAFSLVRLKPDSVPAPNSNTNNNSAAPSPLSNTILPPAMATTEDFSAAASPLQRMASITNSLITQPPVTPHHTQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMNSIPMQKMMNDLKMEPQAQHIMQQMQAASAMAAAAAAGHMQNAQHQGMLLTTPGLPPQHAISLQQAAANAAAANEKKPMMMPIHSPHQANAMRSSMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTADFYTSSPGPGSVGSVGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPSEPVPSRENTNATPFDPVQFRILLNQRLMELQKERMGLSGAPIPYPPYFAANPNLAALISRGLLPGGTEPDLQALNNAFKEQMSGLDLSLKRERDGDYDDDGEDESHLSDNESINESDEKSEMSETPRSSLYGAMGQSRTSRRKPAAPQWVNPDWQGDGKTGLMPPTVAGGGVGGGGATDKEVIINGVCVMQQQASDYSRKSGNGEDDEECASDANDEEQTTHHRGQPSDCEDAPADIDQRFMEPEVRIKQEEDCDSNDSHQDNLDLRKQQHHHRDEEDDTPGAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00976241;
90% Identity
iTF_00426140;
80% Identity
iTF_00663949;