Ddia007427.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dasypogon diadema
Gene Symbol
sip1
Assembly
GCA_006980735.1
Location
jcf7180002942015:19290-22358[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.5e-94 2.7e-90 302.5 12.8 2 275 397 662 396 662 0.98
2 2 0.0099 75 2.5 0.3 244 270 676 702 663 707 0.80

Sequence Information

Coding Sequence
ATGTCAGATAATGAATACGAAAGGTTTGAAATAACAGACTACGATCTGGAAAATGAGTTCAACCCGAATCGGGGTCGAAGGAGGCAGACAAAACACCAGCAAATTTATGGCATATGGGCTGACGATAGCGATAACGATGATGAGGCAGAGCTATCTTCAAGACGAAGAGGCCGAAAAATGAAGGATTACTCTGCTCCTGTAAGTTTTGTTGCTGGGGGCATCCAACAGTCGGGTAAAAAGCATGACGAGGAAGACAGGGAAGAAGATGACTCACAGATTACTGATGAGGAGGATGAACGCCCATCGTTCGGTAGAAAAGAAATTGAGAAGGGTTCTTCATCCGAATCAGAATCAGAACCAGAACCAGAATCTCGACCGAAAATGACTTCAAGAAATCCTGGCTTTGGTAGTGGCCAGAGTAGACCATCTGGTATGACTGCGGGTTTGGGAAAGTGGGAGGCGCATACAAAGGGAATCGGAGCAAAGTTGTTGCTTCAAATGGGCTATAAGCCTGGAAAGGGTTTGGGGAAAGATCTTCAAGGTATAGCTCAACCCGTAGAGGCTCATATGCGAAAGGGAAGAGGAGCAATTGGTGCTTATGGACCGGAAAAAGCTGCCAGTACCACAAATCAGAAGCAACAAATCCTGCAAATCGATGAGGATGAACGTGAAGCTAAGGAATTTAAGGATAAGATGAATATGTGGAAGAAAGATGGGAAGCGGGAAAAGTCGAAAAAGAACCGGTACTACTACAGAAGTGTAGAAGAAGTAATTGAAAAGGGAAAAAGGTCCAATATTCTGTCTGAAAAATACAGCAATAAACTAAGTAATGTAACTGTGATCGACATGACTGGACCCGAAAAACGAGTGCTAAGTGGCTATCACGCATTGGGTCAGGCTAAAGTCTTGGATGAAGACTTGTATGAACATCGGCAGACTAAAAAATGTACAAACTTCACACTGCCAGAACTCATGCACAATTTGAATCTAATTGTGGACATGTGTGAGCAGGATATAATTTCCATAGATAAAACAGAAAGGGAGGCAAACGACAAACAGAAACAACTCGAACATGAAAAAGAAAACTTGAGAAAAATTGTGAAGCTTGAAAACGATCACATATCAACCCTGGAACAGGCCCTAGAACTTGTAGAGTCCTTGACGAATCCCAAAGAGAATTTAACTCTAGCTAGGGCAGAAAAAATATTCATTCAACTGCAAACAGATTTTCCAGCGGAATACAAAGAGTTTGGTTTGGGTGACCTGGCCGCCGGGGTTATTGCTCCACTTGTTAATCAAGAACTGAGCAACTGGAAACCTCTGGAAATTCCTACACACTACGTCGATTCCATTAAGAAATGGCGCATGATTTTAGGAATGCATCAGTCAGAGACTAGAAATGTTTTCGATCCCTACTCCTCCTTAGTATGGGCCGGAGTTGTCCCAAGCTTTCGTGCTGCAGCTACAGAATGGAATCCTAAAACTCATCAGCCTATGGCAGCATTGTTAGATGCCTGGGCCCCACTATTTCCTACTTGGATTCTTGACAATGTATTGGAACAGGTCATTTTGCCGCGACTAACGGCTGGCGTTCAGGCATGGGATCCCCTCACTAACACTATACCAATTCATGTATGGATCCTGCCTTGGAGTGGAATTTTGGGCCATAAAATGGAGGAATCTATTTATCCCATGATTCGTGAAAAATTGGGAAATGCTCTTCAAGCCTGGGTGCCACAGGATCGATCAGCACGATTAATGCTGACCCCGTGGAAGACTGCGTTTGCCGATGGTGAGATGCAGAGCTTCTTACTCAAGCATGTTGTACCGAAACTACAGCTCACACTGTCAGAAATGATTATCAACCCCCTTCAGCAGGATTTGGAGCCATGGAATCAAGTTTGGGAATGGCATGAGCTTATTTCTCCCATTATCATGTCTCAAATGTTGGATAAGTTCTTCTTCCCCAAGTGGACACAGACCTTGGTAATTTGGTTAAATCAACAGCCCAACCTAGATCAGATATCAAGGTGGTATTCGGGATGGAAGAGTTTGCTATCTGACGATGTCTTGCAACAGATTAACATTAAGGAGCATTTTAGAAGGGCACTAGAGTTGATGCATCGCGCAACAGCAGTTGCTAATCCAGAAATACCACCGCCACAGCCTCAACCTCAACCTCAACCACAACCACAAATACCACAACTTCAGTCCCAACCACAGGGTGTTTCACATCCACCTGCATTGATGGATCTGCAAATACCACCCCCTCCACAGTTAGAATTTAAGGAGCTTGTGTCGCAGCGGTGTGCTGAACGTGGTATAATTTTTGTACCAATGCCTGGTAGGAGAGAGTTTGGAAAACAAGTGTACAGGGTGGGGAAACTCTTCTGTTATATTGATAGAGCTGTACTGATGGTTAGTGATGGTAGTTTTACCAGTTGGACACCAACGTCTTTGGGATTGCTTTTAGAGAGAGCTGTGACTGGTTAA
Protein Sequence
MSDNEYERFEITDYDLENEFNPNRGRRRQTKHQQIYGIWADDSDNDDEAELSSRRRGRKMKDYSAPVSFVAGGIQQSGKKHDEEDREEDDSQITDEEDERPSFGRKEIEKGSSSESESEPEPESRPKMTSRNPGFGSGQSRPSGMTAGLGKWEAHTKGIGAKLLLQMGYKPGKGLGKDLQGIAQPVEAHMRKGRGAIGAYGPEKAASTTNQKQQILQIDEDEREAKEFKDKMNMWKKDGKREKSKKNRYYYRSVEEVIEKGKRSNILSEKYSNKLSNVTVIDMTGPEKRVLSGYHALGQAKVLDEDLYEHRQTKKCTNFTLPELMHNLNLIVDMCEQDIISIDKTEREANDKQKQLEHEKENLRKIVKLENDHISTLEQALELVESLTNPKENLTLARAEKIFIQLQTDFPAEYKEFGLGDLAAGVIAPLVNQELSNWKPLEIPTHYVDSIKKWRMILGMHQSETRNVFDPYSSLVWAGVVPSFRAAATEWNPKTHQPMAALLDAWAPLFPTWILDNVLEQVILPRLTAGVQAWDPLTNTIPIHVWILPWSGILGHKMEESIYPMIREKLGNALQAWVPQDRSARLMLTPWKTAFADGEMQSFLLKHVVPKLQLTLSEMIINPLQQDLEPWNQVWEWHELISPIIMSQMLDKFFFPKWTQTLVIWLNQQPNLDQISRWYSGWKSLLSDDVLQQINIKEHFRRALELMHRATAVANPEIPPPQPQPQPQPQPQIPQLQSQPQGVSHPPALMDLQIPPPPQLEFKELVSQRCAERGIIFVPMPGRREFGKQVYRVGKLFCYIDRAVLMVSDGSFTSWTPTSLGLLLERAVTG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01256405;
90% Identity
-
80% Identity
-