Dple019902.1
Basic Information
- Insect
- Danaus plexippus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_018135715.1
- Location
- JAEQBL010000004.1:858195-866313[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-75 2.9e-71 240.5 22.0 1 269 110 369 110 389 0.88 2 2 1 2.2e+04 -5.6 16.6 1 49 390 440 390 463 0.68
Sequence Information
- Coding Sequence
- ATGGCTGAGTCAGGACTGGCGACCCCCGAGAACTCCGATGATGAGAGTGGTGATGCCTTCACAGATGGTGATTTCGGTGATTCAGATGACGAGGTGATCGCCGATTGTAAGACAAGTGACGGTTTAAATTCTCAGCACGTCAATGAGACTGTGAACACTGGTGTTGTAGAAAAGAATTGCAGTGACGTAATAGATATAGGAGTAGAGGACAATATGAAAGACATTAGTGAAAATAGTGGTGTTATAGATGATGATGATGATGATTTGATGAAGGATTTGAGCAGCAACGGATCTATTGTCGGCATACTCGGGGATCAGCACAATCATGCCGAGCAACGCCTGGCGGCTCGGCGAGCGGCTCGGGCGGAGGCTCGGGAGATACGGATGAGAGAGCTGGAAAGACAGCAGAGAGAACAGGAGGACCATGCCGATAAGGCGTACGACATGTACAACGAGACGGTGGGCCGCCGCGCTGGCAGCCGGCTAGCAGCTCTTAGTCCGAGCGTCCACTCGCCCCGACGAAGCTCCGAAGACTCCGAGGACGTGCTCAGCATCAAGGACCTCAGACACGAGATGAAAGAAGTCGAGGAGAAGTTTCGGAAGGCGATGATCCTGAACGCTCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTGGAACTGCTCAAGGACAGGATCGAGGAGCTGCACGAGGAGTACGCTCAGCTGCAGCGCGAGCACCGCGAGAAGTGTTCCCTCCACGAGCGGCTCAAGAGGGAGCACGCCACCCTGGAGCGGGAGGTGGCGGAGGCGAGAGACGCCGTGCGGGCGCGAGACGGCGCGGCGGCGGCAGCGGGCCGGGTGTTCGTGGACGCCAGCGCCGCGCCCGGCGTGCCGTCCGGCGGGGCGTGCGGCGCGGTGCCGGCCTTGGCGCTCGTCACGCTCGAGAACCAACAGCTGCTGGACGACGCCGGAGAGGGCACGCTCGACGTGCGACTGTCTCGGCTGGCGGAGTCCAAGTCGTGCCTGGAGGGCGAGGTGCGGCGTCTCAAGCTGCAGCTGTGCGACGAGCGAGCAGCCAGACAGAACGGAGTAGCCGAGCATCACGACAGGGACCTGGACAACGAACTGGAGTCGCTCCGCAAGGCGCTGTCAGAGGCGAAGGGTCGCGCGGCTAGGGCGGAGGCCGAGGCGGCGCTGCAGGCGGCCGGCGTAGCAAGGCTCGAGGCGCAGGTTGTGCGACTGCGGGCGCGCCAGGAGGACCAGGACGAGCGAGAGGAGGCGCTCAAACAGGACCGAAGAAGGCTGCAGAGAGAGGCGAGAGAGGCGCTGAACCGGGTCGAGGAGTTGGAGACGGAGAACAGTCACCTCACCAAGCGACTCGACAAACTCAAGAACGCTAAATCCGCTCTGCTCAAGGACCTGTGA
- Protein Sequence
- MAESGLATPENSDDESGDAFTDGDFGDSDDEVIADCKTSDGLNSQHVNETVNTGVVEKNCSDVIDIGVEDNMKDISENSGVIDDDDDDLMKDLSSNGSIVGILGDQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYNETVGRRAGSRLAALSPSVHSPRRSSEDSEDVLSIKDLRHEMKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSLHERLKREHATLEREVAEARDAVRARDGAAAAAGRVFVDASAAPGVPSGGACGAVPALALVTLENQQLLDDAGEGTLDVRLSRLAESKSCLEGEVRRLKLQLCDERAARQNGVAEHHDRDLDNELESLRKALSEAKGRAARAEAEAALQAAGVARLEAQVVRLRARQEDQDEREEALKQDRRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00420561;
- 90% Identity
- -
- 80% Identity
- -