Dere005464.2
Basic Information
- Insect
- Danaus eresimus
- Gene Symbol
- -
- Assembly
- GCA_018231745.1
- Location
- DVQP01002872.1:1543-9380[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.013 1.1 10.5 0.9 3 23 244 265 243 265 0.92 2 22 1.3 1e+02 4.3 0.3 1 22 638 659 638 659 0.95 3 22 5.6 4.6e+02 2.3 0.3 1 22 700 721 700 723 0.82 4 22 0.24 20 6.6 0.6 1 14 732 745 732 753 0.84 5 22 0.012 0.98 10.7 0.1 3 23 803 824 801 824 0.94 6 22 0.086 7.1 8.0 6.3 1 23 830 853 830 853 0.95 7 22 0.1 8.6 7.7 0.0 1 23 879 902 879 902 0.90 8 22 0.016 1.3 10.3 3.4 1 23 907 929 907 929 0.97 9 22 0.00053 0.044 14.9 0.4 1 23 935 958 935 958 0.96 10 22 6.2e-05 0.0051 17.9 1.3 1 23 970 992 970 992 0.98 11 22 0.0012 0.1 13.8 4.0 1 23 1035 1058 1035 1058 0.96 12 22 0.0057 0.47 11.7 1.8 1 23 1108 1131 1108 1131 0.96 13 22 0.00092 0.076 14.2 2.1 2 23 1156 1178 1155 1178 0.95 14 22 0.072 6 8.2 0.1 2 23 1184 1206 1183 1206 0.93 15 22 0.0082 0.68 11.2 0.2 1 21 1250 1270 1250 1271 0.95 16 22 0.00038 0.032 15.4 0.6 1 23 1281 1303 1281 1303 0.94 17 22 7.1e-05 0.0058 17.7 0.4 2 23 1393 1415 1392 1415 0.93 18 22 1.5e-07 1.2e-05 26.1 1.1 3 23 1422 1442 1421 1442 0.98 19 22 0.00058 0.048 14.8 2.3 1 23 1460 1482 1460 1483 0.95 20 22 0.16 13 7.2 0.0 1 23 1505 1527 1505 1527 0.97 21 22 0.023 1.9 9.8 0.6 1 23 1533 1556 1533 1556 0.95 22 22 0.00021 0.018 16.2 0.4 1 23 1564 1587 1564 1587 0.96
Sequence Information
- Coding Sequence
- atgaatgTAAATTATGACCGTGTTTGTAGACTGTGCTTGTCATCTACATGTGAATTACTACCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCTTGTCCTCGCTTCGAAGATTAAAGATTGCGTGTCAGTACAGataaGCGAAAATGACGATCTGCCAACTAATGTCTGCAGGAAATGTATGGATAATGTTAATAACTGGCACATATTTAAGACAGTATGTGAAAGAACACAAAACAGATTACTAtcgtttttaaataaggaGAGTGACCAACTAGAAGAGgtgaaaattaaaaatgagcCTTTATCTGATGAAGCCTATGATGATGGAGTAGTCATTGATGGTTCATATCCTGAAAGTGAAAATGCTGCCCCATCCAGTAAGGTCCAACCGGAAGGTCCACCTATCTTGGCTTCATTGGGGCTCACACCAAGAAGTGATAAGAAATATGTAGATCCAAGGATGGATTGGCAACGAGTCCATGCTATATTAGATATTGTGCAAGAGAGTGATGTCATTGATTCTCTACAATCTAATGAAGAATGTGATGTTCTGCATGGAATGGATAGCGAAAAGGATGAGGACTATGAAGAGGAGGAAGAAATTGATCAACAGCAATTCACACACGTCCCAAACATGCCAGAAGTTTCCATTACGGTCATGAGACCAACCGGTGAAACTCTTCATGCTCGTCAGGGTATTCAAGAAATAGCGTCCAAGGATTGTCTAGTTTGTGGTCGGTCATACAGATATTCCCATAATGCCAGAAGACACGAACTGAACGCGCACAGCTTTGACAGATATACCAATAAGATAACTAATAAGAAACAGCAATCACACATGCAACCCAAGTTCAGGCCGAATCCATTCAACCCTAAAGCTCGCCTGATGCCGAATCCCATCAGCCACAAAATgcaatttcattcaaaatcaATTCCGGGTAGAATGCCACAGAGGATTGTCGCACCGCCGAAGCCGATACCAATTAAAACCCCAAAAGCTTCGCAAAATAACTTGCCATACCCTCTTCGTATAAAAGCATTAAAAGATCTGCAGATCAAAAAGAAGGAACCCCAAATTTTAAAGACACTTTTGACTTCCAAACCGGAAGTTTTGGTGTCTGAgcctgaaataattaattcaggTCCGGAAAGTCCTGAGACGTTAATTTCCGAACCGGAAATAGCGTCTTTCCAAGTGGAGACAATTTTATCAGAACCAGAAGGATATGTCAACCAACAACAAGATGATGACGAAGGAGTTAATGATAATAACCAAGGCCAACACTATGACACCGTTGATATGGAATCagataatgaaattgaaattgcACGGCAAAATGAAAACGACATTGATGTAGATGAGAATCCCATGAACGATCCTGAAGAAAACCAGAAtgatgaagaaaataatatggaTGATGGGCAAGAGGACAGTGATAGAGGAAATGACGATAGTGATGACAGACAGGAGGATTTAGTAAATAACGTGGATGGTGAAGGTGGTGATGCCAAAGAAAGTCAGGATGATGAGACGGAAAAggataattatcaaaatataaagaatgaaGATAATGAAGATGATGAAATGCCAGCATTAAACATTGCACCCGTCGTCGAAATAAATGAGGACATGCAAACAAACTCTTACAATAGTGATGGTAACGAGGAGGAAGAAGCTGATGAGACGGTTGATCCAAATGACACAGTTGATGGTGATGAAGCTGAAAAAGATTTGGACCCAGATAAAGTGTACATCACTAAAACTCAAAGAGACTTCATCTTAAAGTACCGTGATATCATCGAACAGATCAATACTAAGCGGTGTCTTTGTTGTAATAAAGAACATCCGCGCAGGAAAGCGGTTATACAGCATTTGCAGAAAAATGGACACAAAGTCCCAAAGCACACATGCTATAATTGCGTAGTGACTTACGGACATATCGGTGCTTTGTTGAGTCACATGAGATCGAACACTTGTACTGATCtgtggaaaataatttataacgaaaatgGCATAACCGATGATATCGTGTTAGAAGATAAACCCGATAATAAAATTCCATACAAAGACGTTGTCAATGCTAGGTCGTACGCTTGTAAATTATGTCCAGCGAAATTCCAactgaaacaatttattatgaaacacgTTTTAGACGTTCACGAGGATGGTCAATCACGTGTTCCGTTTTCTTGCGTCCACTGTGGGATGAGgtttaaagacaaaaatatcgGTAAAAGACATATTCGTAATGGAGACTGTACTGTGTATATAGCTTGTGAGTTATGTTCTGAGAAGTTTTTGAACATGCAAGATTTCAATGATCATGCTGTTTCCGTGCATGCTGGCAATTTAGATCCCGAAAACCAAAACAAATGTGTGGACGGTCGGCCGACTGATTGTCCTATCTGTGGTAAGAAGAACAGTAGCTATCCCAATTTAGTGAAGCATTTGAAAGCTGTTCATAACGAAGAAAAGCCTCATCACTGCCAACATTGTGACTCTAAATTCGAGCAAACTACTGATCTTAACAAGCACATATACATGGAACATTCTGATAGAAGTTTGGGTATGCAGTCTATAGAACCCGACATGTCAATTGTTAAGGAGGAAGCCGAAGAATATCATTATTCATGTACGGAATGCAACGCCATCTTTGAAACTGTCGACGCGTGGACAGATCATCAAGTTGCCGAACACAACCAGGTCGCACATCACTGTGATCAGTGTGAAAAGAAATTCTTACGACCATCAGAACTTGCTGAACACAAAAACACACATTTGCGTGTTAAATTTTATCCATGTAACGTATGTTCGAATTCCTACAGCACTCCACAAAAGCTGACTGAGCATATGCAGCAGATGCATCCTGGGTCCAACGCACGTGGTGGTGATAGCGACTTCTATTGTGATATATGCGTCAGATCGTTCAAGAGTCGACAAGCATATTCTAATCACATGCGTATACACTCTAGAGTTCCGACAACTAACAGGAAACCAGGAGAATCTAAAGGATTTGCTCCACAAATTGTCGGTAAGCCCATAAAGCAATTCTCAATGCAACCTGGTTATAGCCCCTACGTCCCCAATGCACCATATTGTTGTGACATTTGCGGAAAAGGATTCAtgcataagaaaaatatatggaaacataaaaaagtgcTACACGCTGATCTACTTAATGATAGGAATGACAGCGAGGAAAATACCATGCATGCTTCTACAGAAGAGGATGAATATAATGTTGATGAAAATGGTGCCATTTTAACGACACCacaatttaatagttttaatttcactaaTGACGCTTTGCCATATTCGTGCGAGTTATGTTACAAACGTTTTCCGCTGCGGACGTATTTATGGAAACACAAACGCGCCAAGCATGGCATCACCAAACCCAACGCTAGTGAAGCTTCAGAAACACAAACACAGCCCTCATCGGCGGAAGGGAGATCTAGTTGTACgatatgtaaaataacattctcCGATAAGAAATCATACTACCGTCATAGGAAAAACGTCCACAAGTCGACTGTCCAGATGTGTAAGATATGTGGAAAACCTTTGAATTCAACTTTGGAATTATACGAGCATCTTAAAGCTGCGCATGCTCGCGAGTTACTTGGGTACAACGCCAACCAAGGTCCGAGCAAATCGCAGGAGGTTGTTCAGGAAATGGAGGTGGAATACGACGAAGATCAAGATTCCGCTGACCCGAGCGTCGATTACCAAGCCAGATACCCGTGTGATACTTGTGGGAAGCAGTTCGTTGGACTTCTTGCTTTGCAGAATCATCAGTGTATAAACCAGATTCAGACACAGCCGCAAACATTTGAATGCGAAATTTGTCACAAGAGCTACACGTCAATTGCTGCACTGAAAAGCCACCGGGGGTGGCATTTACGGTCTCCAGATGGAAAAGCGGCTGCCAATAATACTGGATTATGGATGCCCCAAAACAAAGTGACGACCAAAGTGAGCAAACACGAAGTTGTAGACCCGTCCCAGCTCGCACGTGTTCAACATTCAACACCAGCCAACATTGCTAAAAGGAGACTACCGCCGGAAGTCGAAATAACTGTGGTTAATCCGAACAAAAAGCTTCGGTCGGATGATTCCATTGAATTGGATCATCAGAACAATTCGTCTGGCGTTCCTGAAGATAAATACTGTAACATATGCGATAAAGAATTTACGAAGAGAGCGGCCTACCAGCGGCATATGGACGAAGTACATCAACCGAACTCCGTGTTCTGTCCCGTATGCGACAAGAGCTTCACCAGGAAATCAACATTGATAGTACACATGAAGAAGCATTACGAAAGCGGAGAAGGTACATCAGGGTCCACACAAATGGATGAAGATTCCCACACCTGTGATGTATGCGGCAGTGTGTTCGACAGCTCAAAGTCTCTGATGGCCCACAAGAACATGCATCATGGCGAGGATGAGTCCGATCAGTCCGAAGACGACGGCGGCGCGCCTATACAGCCACCAGGCGAATTCACATGCGCTCAATGCGGGGATGGCGTCGCCACACCACGTGACTTAATAGCACACCGAGCTATGCACGCTACTCCGACGAAGTTCTTctgtaatatttgtaaggTCTACTTTGCTAGAGCGTTGGACCTCTCCTCCCACACTCGAGCCAGACATTCTGACAACGAGAAAGTATTCTTCCCTTGCGCGATGTGCGAccgtttttatatgaacaagaAGAGTTTGCAACGCCACATAGAAATGGCTCACTGA
- Protein Sequence
- MNVNYDRVCRLCLSSTCELLPIFPTTSSDDSEPLVLASKIKDCVSVQISENDDLPTNVCRKCMDNVNNWHIFKTVCERTQNRLLSFLNKESDQLEEVKIKNEPLSDEAYDDGVVIDGSYPESENAAPSSKVQPEGPPILASLGLTPRSDKKYVDPRMDWQRVHAILDIVQESDVIDSLQSNEECDVLHGMDSEKDEDYEEEEEIDQQQFTHVPNMPEVSITVMRPTGETLHARQGIQEIASKDCLVCGRSYRYSHNARRHELNAHSFDRYTNKITNKKQQSHMQPKFRPNPFNPKARLMPNPISHKMQFHSKSIPGRMPQRIVAPPKPIPIKTPKASQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIINSGPESPETLISEPEIASFQVETILSEPEGYVNQQQDDDEGVNDNNQGQHYDTVDMESDNEIEIARQNENDIDVDENPMNDPEENQNDEENNMDDGQEDSDRGNDDSDDRQEDLVNNVDGEGGDAKESQDDETEKDNYQNIKNEDNEDDEMPALNIAPVVEINEDMQTNSYNSDGNEEEEADETVDPNDTVDGDEAEKDLDPDKVYITKTQRDFILKYRDIIEQINTKRCLCCNKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTYGHIGALLSHMRSNTCTDLWKIIYNENGITDDIVLEDKPDNKIPYKDVVNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPFSCVHCGMRFKDKNIGKRHIRNGDCTVYIACELCSEKFLNMQDFNDHAVSVHAGNLDPENQNKCVDGRPTDCPICGKKNSSYPNLVKHLKAVHNEEKPHHCQHCDSKFEQTTDLNKHIYMEHSDRSLGMQSIEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCNVCSNSYSTPQKLTEHMQQMHPGSNARGGDSDFYCDICVRSFKSRQAYSNHMRIHSRVPTTNRKPGESKGFAPQIVGKPIKQFSMQPGYSPYVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLNDRNDSEENTMHASTEEDEYNVDENGAILTTPQFNSFNFTNDALPYSCELCYKRFPLRTYLWKHKRAKHGITKPNASEASETQTQPSSAEGRSSCTICKITFSDKKSYYRHRKNVHKSTVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGPSKSQEVVQEMEVEYDEDQDSADPSVDYQARYPCDTCGKQFVGLLALQNHQCINQIQTQPQTFECEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQNKVTTKVSKHEVVDPSQLARVQHSTPANIAKRRLPPEVEITVVNPNKKLRSDDSIELDHQNNSSGVPEDKYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYESGEGTSGSTQMDEDSHTCDVCGSVFDSSKSLMAHKNMHHGEDESDQSEDDGGAPIQPPGEFTCAQCGDGVATPRDLIAHRAMHATPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00897124;
- 90% Identity
- iTF_00419163;
- 80% Identity
- -