Basic Information

Insect: Danaus chrysippus
Gene Symbol: -
Assembly: GCA_004959915.1
Location: RPCZ01000006.1:1470565-1478426[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.01 0.75 10.6 0.9 3 23 206 227 205 227 0.92

2 22 0.98 71 4.4 0.3 1 22 600 621 600 621 0.95

3 22 4.4 3.2e+02 2.3 0.3 1 22 662 683 662 685 0.82

4 22 0.19 14 6.6 0.6 1 14 694 707 694 715 0.84

5 22 0.0093 0.67 10.7 0.1 3 23 765 786 763 786 0.94

6 22 0.067 4.9 8.0 6.3 1 23 792 815 792 815 0.95

7 22 0.081 5.9 7.8 0.0 1 23 841 864 841 864 0.90

8 22 0.012 0.88 10.4 3.4 1 23 869 891 869 891 0.97

9 22 0.00044 0.032 14.9 0.4 1 23 897 920 897 920 0.96

10 22 4.8e-05 0.0035 17.9 1.3 1 23 932 954 932 954 0.98

11 22 0.00094 0.068 13.9 4.0 1 23 997 1020 997 1020 0.96

12 22 0.0044 0.32 11.7 1.8 1 23 1070 1093 1070 1093 0.96

13 22 0.00072 0.052 14.2 2.1 2 23 1118 1140 1117 1140 0.95

14 22 0.056 4.1 8.3 0.1 2 23 1146 1168 1145 1168 0.93

15 22 0.0064 0.47 11.2 0.2 1 21 1212 1232 1212 1233 0.95

16 22 0.0003 0.022 15.4 0.6 1 23 1243 1265 1243 1265 0.94

17 22 5.5e-05 0.004 17.7 0.4 2 23 1355 1377 1354 1377 0.93

18 22 1.2e-07 8.4e-06 26.2 1.1 3 23 1384 1404 1383 1404 0.98

19 22 0.00045 0.033 14.9 2.3 1 23 1422 1444 1422 1445 0.95

20 22 0.12 8.9 7.2 0.0 1 23 1467 1489 1467 1489 0.97

21 22 0.018 1.3 9.8 0.6 1 23 1495 1518 1495 1518 0.95

22 22 0.00017 0.012 16.2 0.4 1 23 1526 1549 1526 1549 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.01	0.75	10.6	0.9	3	23	206	227	205	227	0.92
2	22	0.98	71	4.4	0.3	1	22	600	621	600	621	0.95
3	22	4.4	3.2e+02	2.3	0.3	1	22	662	683	662	685	0.82
4	22	0.19	14	6.6	0.6	1	14	694	707	694	715	0.84
5	22	0.0093	0.67	10.7	0.1	3	23	765	786	763	786	0.94
6	22	0.067	4.9	8.0	6.3	1	23	792	815	792	815	0.95
7	22	0.081	5.9	7.8	0.0	1	23	841	864	841	864	0.90
8	22	0.012	0.88	10.4	3.4	1	23	869	891	869	891	0.97
9	22	0.00044	0.032	14.9	0.4	1	23	897	920	897	920	0.96
10	22	4.8e-05	0.0035	17.9	1.3	1	23	932	954	932	954	0.98
11	22	0.00094	0.068	13.9	4.0	1	23	997	1020	997	1020	0.96
12	22	0.0044	0.32	11.7	1.8	1	23	1070	1093	1070	1093	0.96
13	22	0.00072	0.052	14.2	2.1	2	23	1118	1140	1117	1140	0.95
14	22	0.056	4.1	8.3	0.1	2	23	1146	1168	1145	1168	0.93
15	22	0.0064	0.47	11.2	0.2	1	21	1212	1232	1212	1233	0.95
16	22	0.0003	0.022	15.4	0.6	1	23	1243	1265	1243	1265	0.94
17	22	5.5e-05	0.004	17.7	0.4	2	23	1355	1377	1354	1377	0.93
18	22	1.2e-07	8.4e-06	26.2	1.1	3	23	1384	1404	1383	1404	0.98
19	22	0.00045	0.033	14.9	2.3	1	23	1422	1444	1422	1445	0.95
20	22	0.12	8.9	7.2	0.0	1	23	1467	1489	1467	1489	0.97
21	22	0.018	1.3	9.8	0.6	1	23	1495	1518	1495	1518	0.95
22	22	0.00017	0.012	16.2	0.4	1	23	1526	1549	1526	1549	0.96

Sequence Information

Coding Sequence: atgaatGTAAATTATGACCGTGTTTGTAGACTGTGCTTGTCATCTACATGTGAATTACTACCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCTGTCCTCGCTTCAAAGATTAAAGATTGCGTGTCAGTACAGataaGGGAAAATGACGACCTGCCAACTAATGTCTGCAGGAAATGTATGGATAATGTCAATAACTGGCACATATTTAAGGCAGTATGTGAAAGAACACAAAACAGATTACTATCGTTTTTAAATAAGGAGAGTGACCAACTAGAAGAGgtgaaaataaaaaatgagccTTTATCTGATGAAGCTTATGATGATGGAGTGGTCATTGATGGTTCATATCCTGAAAGTGAAAATGCTGCCCCATCTAGTAAGGTCCAACCAGAGGGTCCACCTATTTTGGCTTCATTGGGGCTCACACCAAGAAGTGATAAGGGAATGGATAGTGAAAAGGATGAGGATTATGAAGAGGAGGAAGAAATTGACCAACAGCAATTCACACATGTCCCAAACATGCCAGAAGTATCCATTACAGTCATGAGACCAAGCGGTGAAACTCTTCATGCTCGTCAGGGTATTCAAGAAATAGCATCCAAGGATTGTCTAGTTTGTGGTCGGTCATACAGATATTCCCACAATGCCAGAAGACATGAATTGAACGCGCACAGTTTTGACCGATACACCAATAAAATAACGAATAAGAAGCAGCAATCACACATGCAACCCAAGTTCAGGCCGAATCCATTCAACCCCAAAGCTCGCCTCATGCCAAATCCCATCAGCCACAAAATgcaatttcattcaaaatcaATGCCCGGTAGAATGCCACAGAGGATAGTCGCGCCGCCGAAGCCGATACCAATTAAAGCCGCTAAAGCCTCGCAAAATAACTTGCCTTATCCGCTTCGTATAAAAGCATTAAAAGATCTGCAGATCAAAAAGAAGGAACCACAAATTTTAAAGACACTATTGACTTCCAAACCAGAAGTTTTGGTGTCAGAGCCTGAAATAATCAATTCAGGCCCAGAAAGCCCAGAGACGTTGATTTCCGAACCTGAAATAGCGTCTTTCCAAGTGGAAACAATTTTATCAGAACCAGAAGGATATGTCAATCAACAGCAAGATGATGACGAAGGTGGAAATGATAATAACCAAGGCCAACATTATGATACCGTTGATATGGAATCTgataatgaaattgaaattgcACGACagaatgaaaatgaaatagatGTAGATGAAAATCCCATGAATGATCCCGAAGAAAACCAGAATGATGAAGAGAATAATATGGATGATGGGCAAGAGGACAGTGATAGAGGTAATGATGATAGTAATGACAGACAGGAGGACTTAGTAAATAACGTGGATGGTGAGGGTGGTGATGCCAAAGAAAGTCAGGACGATGAGACAGAAAAAGATAATTACCAAAACATAAAGAACGAAGATAATGAAGATGATGAAATGCCGGCATTAAACATTGCACCCGTCGTCGAAATAAATGAAGACATGCAAACGAACTCGTACAATAGTGATGGGAACGAGGAGGAAGAAGCTGACGAAACGGTTGATCCCAATGACACGGTTGATGGTGATGAAGCTGAAAAAGATTTGGACCCAGATAAAGTGTACATCACTAAAACTCAAAGAGACTTCATCTTAAAGTACCGTGACATCATTGAGCAGATCAATACTAAGCGGTGTCTTTGTTGTAATAAAGAACATCCACGGAGGAAAGCTGTTATACAGCATTTGCAGAAAAATGGACACAAAGTACCAAAACACACTTGTTATAATTGCGTAGTGACCTATGGACATATCGGTGCTTTGTTGAGTCACATGAGATCGAACACTTGCACTGATCTgtggaaaataatttataacgaaaATGGTATAACCGATGATATCGTGTTAGAAGATAAACCCGATAATAAAATTCCATACAAAGATGTCGTTAATGCTAGGTCGTACGCTTGCAAGTTATGTCCAGCGAAATTCCAGctgaaacaatttattatgaaacacGTTTTAGATGTCCACGAGGATGGTCAATCTCGAGTTCCGTTTTCTTGCGTCCATTGTGGGATGAGATTTAAAGACAAAAACATTGGTAAAAGACATATTCGCAATGGAGATTGCACTGTGTATATAGCTTGTGAGTTATGTTCTGAGAAGTTTTTGAACATGCAAGATTTCAATGATCATGCTGTTTCCGTGCATGCTGGCAATTTAGATCCCGAAAACCAAAACAAATGTGTGGACGGTCGACCGACTGATTGTCCAATCTGTGGAAAGAAGAACAGTAGTTACCCCAATTTAGTGAAGCATTTGAAAGCCGTACATAACGAAGAAAAGCCTCATCACTGCCAACATTGTGACTCTAAATTCGAGCAAACTACTGATCTTAACAAGCACATATACATGGAACATTCTGATAGAAGTTTGGGTATGCAGTCTATCGAGCCCGACATGTCAATTGTTAAGGAGGAAGCCGAAGAATATCATTATTCATGTACGGAATGCAACGCCATCTTTGAAACTGTTGATGCGTGGACGGATCATCAAGTTGCCGAACACAACCAAGTCGCTCATCACTGTGATCAGTGTGAAAAGAAATTCTTACGACCATCAGAACTCGCTGAACATAAGAACACACATTTGCGAGTTAAATTTTATCCATGCAACGTATGTTCGAATTCCTACAGCACTCCACAAAAGCTGAATGAGCATATGCAGCAGATGCATCCTGGGTCAAATGCACGTGGAGGTGATAGCGATTTCTATTGCGATATATGTGTTAGATCGTTTAAGAGTCGTCAAGCATATTCTAATCACATGCGTATACACTCCAGAGTCCCGACAACTAATAGGAAACCAGGAGAATCTAAAGGATTTGCTCCTCAAATTGTCGGTAAACCCATAAAACAATTCTCAATGCAACCTGGTTATAGTCCCTACGTCCCCAACGCGCCATATTGTTGTGATATTTGCGGAAAAGGATTCAtgcataagaaaaatatatggaaaCATAAAAAAGTTCTACACGCTGATCTACTTAATGATAGGAATGACAGCGAGGAAAATACCATGCATGCTTCTACAGAAGAGGATGAATATAATGTTGATGAAAACGGTGCCATTTTAACGACGCCacaatttaatagttttaatttcacCAATGACGCTTTGCCATATTCATGTGAGTTATGTTACAAACGTTTTCCGCTACGGACATATTTGTGGAAACACAAACGCGCTAAGCACGGCATCACCAAACCTAACGCTGGTGAAGCTTCAGAAACACAAACACAGCCGTCATCGGCTGAAGGGAGATCTAGCTGCACgatatgtaaaataacattctCTGATAAGAAATCATACTATCGTCATAGGAAAAACGTTCACAAGTCGACTGTGCAGATGTGTAAGATATGTGGGAAACCTTTGAATTCAACTTTGGAATTGTACGAGCATCTTAAAGCTGCGCATGCTCGGGAGTTACTTGGATACAACGCCAACCAAGGTCCCAGTAAATCACAAGAGGTTGTTCAAGAAATGGAGGTAGAATACGACGAAGATCAAGATTCCGCTGACCCGAGCGTCGATTACCAAGCCAGATACCCGTGTGATACTTGTGGGAAGCAGTTCGTTGGACTTCTTGCTTTGCAGAATCATCAATGTATAAACCAGATTCAGACACAGCCTCAAACATTTGAATGTGAAATTTGTCACAAGAGCTACACGTCAATTGCCGCACTGAAGAGTCACCGGGGATGGCATTTACGGTCTCCAGATGGAAAAGCAGCGGCCAATAATACTGGGTTATGGATGCCCCAAAACAAAGTGACGACCAAAGTGAGCAAACACGAAGTTGTAGACCCGTCTCAACTCGCGCGTGTTCAACATTCAACACCAGCCAACATCGCCAAAAGGAGATTACCGCCGGAAGTCGAAATAACTGTGGTTAATCCGAACAAAAAGCTACGATCTGATGACTCTATTGAATTAGATCATCAGAACAATTCGTCTGGCGTTCCTGAAGATAAATACTGTAACATTTGCGATAAAGAATTCACAAAGCGAGCGGCCTACCAGCGTCACATGGACGAAGTTCATCAACCGAACTCCGTGTTCTGTCCCGTATGCGACAAGAGCTTCACCAGGAAATCTACATTAATAGTTCACATGAAGAAGCATTACGAAAGCGGAGAAGGTACTTCTGGCTCTACACAAATGGACGAAGATTCTCACACGTGTGATGTATGCGGCAGTGTGTTCGATAGCTCAAAGTCTCTGATGGCCCACAAGAATATGCATCATGGCGAGGATGAATCCGATCAGTCTGAAGACGATGGTGGTGCAACCATACAGCCACCAGGCGAGTTCACATGCGCTCAATGCGGCGACGGCGTCGCTACACCACGAGACTTAATAGCACATCGAGCTATGCACGCTACTCCTACGAAGTTCTTTTGTAACATTTGCAAGGTCTACTTCGCCAGAGCATTGGACCTCTCCTCCCACACTCGAGCCAGACATTCTGACAACGAAAAAGTATTCTTCCCTTGCGCTATGTGCGACCGTTTTTATATGAACAAGAAGAGTTTGCAGCGCCACATAGAAATGGCTCACTGA
Protein Sequence: MNVNYDRVCRLCLSSTCELLPIFPTTSSDDSEPPVLASKIKDCVSVQIRENDDLPTNVCRKCMDNVNNWHIFKAVCERTQNRLLSFLNKESDQLEEVKIKNEPLSDEAYDDGVVIDGSYPESENAAPSSKVQPEGPPILASLGLTPRSDKGMDSEKDEDYEEEEEIDQQQFTHVPNMPEVSITVMRPSGETLHARQGIQEIASKDCLVCGRSYRYSHNARRHELNAHSFDRYTNKITNKKQQSHMQPKFRPNPFNPKARLMPNPISHKMQFHSKSMPGRMPQRIVAPPKPIPIKAAKASQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIINSGPESPETLISEPEIASFQVETILSEPEGYVNQQQDDDEGGNDNNQGQHYDTVDMESDNEIEIARQNENEIDVDENPMNDPEENQNDEENNMDDGQEDSDRGNDDSNDRQEDLVNNVDGEGGDAKESQDDETEKDNYQNIKNEDNEDDEMPALNIAPVVEINEDMQTNSYNSDGNEEEEADETVDPNDTVDGDEAEKDLDPDKVYITKTQRDFILKYRDIIEQINTKRCLCCNKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTYGHIGALLSHMRSNTCTDLWKIIYNENGITDDIVLEDKPDNKIPYKDVVNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPFSCVHCGMRFKDKNIGKRHIRNGDCTVYIACELCSEKFLNMQDFNDHAVSVHAGNLDPENQNKCVDGRPTDCPICGKKNSSYPNLVKHLKAVHNEEKPHHCQHCDSKFEQTTDLNKHIYMEHSDRSLGMQSIEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCNVCSNSYSTPQKLNEHMQQMHPGSNARGGDSDFYCDICVRSFKSRQAYSNHMRIHSRVPTTNRKPGESKGFAPQIVGKPIKQFSMQPGYSPYVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLNDRNDSEENTMHASTEEDEYNVDENGAILTTPQFNSFNFTNDALPYSCELCYKRFPLRTYLWKHKRAKHGITKPNAGEASETQTQPSSAEGRSSCTICKITFSDKKSYYRHRKNVHKSTVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGPSKSQEVVQEMEVEYDEDQDSADPSVDYQARYPCDTCGKQFVGLLALQNHQCINQIQTQPQTFECEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQNKVTTKVSKHEVVDPSQLARVQHSTPANIAKRRLPPEVEITVVNPNKKLRSDDSIELDHQNNSSGVPEDKYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYESGEGTSGSTQMDEDSHTCDVCGSVFDSSKSLMAHKNMHHGEDESDQSEDDGGATIQPPGEFTCAQCGDGVATPRDLIAHRAMHATPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00897124;
90% Identity: iTF_00419907; iTF_00420712;
80% Identity: -