Cang005915.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cynaeus angustus
Gene Symbol
-
Assembly
GCA_030157275.1
Location
CM058060.1:14085159-14090570[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 3.4e-06 0.00028 21.5 0.5 2 23 144 165 143 165 0.97
2 16 0.00024 0.02 15.6 4.1 1 23 170 192 170 192 0.97
3 16 0.00027 0.022 15.5 5.2 1 23 198 220 198 220 0.97
4 16 0.00022 0.018 15.8 0.6 1 20 226 245 226 247 0.94
5 16 1.8e-05 0.0015 19.2 0.7 1 23 254 276 254 276 0.96
6 16 0.00022 0.018 15.8 0.1 1 23 460 482 460 482 0.98
7 16 6.9e-05 0.0056 17.4 5.8 1 23 488 510 488 510 0.97
8 16 2.1e-07 1.7e-05 25.3 2.5 1 23 516 538 516 538 0.98
9 16 0.00048 0.039 14.7 1.6 1 23 544 567 544 567 0.93
10 16 0.02 1.6 9.6 2.2 1 23 579 601 579 601 0.94
11 16 0.00029 0.024 15.4 8.1 1 23 607 629 607 629 0.98
12 16 1.7e-06 0.00014 22.4 0.5 1 23 636 658 636 658 0.96
13 16 2.2e-06 0.00018 22.1 1.2 1 23 664 686 664 686 0.98
14 16 3.3e-07 2.7e-05 24.7 0.9 3 23 694 714 692 714 0.96
15 16 7.7e-05 0.0063 17.2 0.2 1 23 720 742 720 742 0.99
16 16 0.045 3.6 8.5 0.7 1 23 747 770 747 770 0.97

Sequence Information

Coding Sequence
ATGGCCCAAGTCGAATACGATTTAAATCGGATTTGTCGGACATGTAAAACCGAGTCGACACAGATGAGATCCGTTTTTGAGGGCTACGAAATGTTGCACGAATGTCCCCGTATTGACGAGATGCTAATGGCTTGTACCTCCGTCCAGGTGAGAGTTGAAGACAGATTGCCCAAGTTGATCTGCGTCAATTGTACGGAACAGCTCAAAGGTGCTTATGTTTTCAAGCAACAATGCCAAGAAGTAGATGCCTCTCTCAGGGAATATGTCAAGAATTTTACCGAGGATATCAAAGTGGAGTTGCAGAATGCAGAGAGCGGAATTACCGAATCTTTTTCCGATACCCCTCCCCAGGAGGCTTCAAAACAGTCAACCAATTCTCCAGAAAACTCAGATTTCATCGAGTTCATGGAAAACAACCAGATGATCCTAACATGCCGCGAATGCGGTAAAGTCTTTACAACGCTCGAAGGTCTCCGCAGCCACAAACGCATTCATTTAGGCACGCTCTTCAAATGTCGATACTGTGGTAAAGGTTACACTCGCCAAACCCACGTTTACCGTCATGAACTTTCACACGGTAAACACAAACTCCATGTTTGTAGAATATGTAACAAGACTCTTACACGAATGGAACATTTAAAGCGTCATCTTACCACtcatttgaaagaaaaaccGTATTCGTGTAAGTCATGCAACCGAGGCTTTAACCGATCCGATCACTTGGAAGTGCATGCTTTGAGGTGTAAAGGCGAGAGAGTTCATATTTGTGATATTTGTAATAGGGGATTTTCGCGAGAAGACAGCTTGGAAGTGCACAAGAGGTTACATGAGAATCAGAAGCCGGCTCTACCTACTTTGGATAATATAGATAATATAGAGGAGCATTATTATGAGATTGATTATGATCCGAACATGGAGTATACGGCTTCTTCGGATGTTGATGACTACTTAGAACCTCATGTGGAAGTCACGGAAAATTTCGATGAAGAGAAGATGAAGGAAGTTGCAGATTTGCAGAATGAGGATAGTTTGCAGAAGAGGGAATCCGAGCAAATGGACATTAAGCAGATTTTAGATTCGCAGGTGGATATTGAAATCAGCGAAAGCGACATTATTATTGACGAAGATAAGAAGATTGTTAGTGGGAATTTTCAGAGTGAAGATTATGGAAATGACCAGGAAACGGAAGTACATAATGATGtacCTGCGGATAATGACTCGGACAGTGCTCACTCCGAGTATCTACCCACGAGAATGGTGAAAAAGCGCGGTCGTGGCAGACCACGGAAAAATCCAGCGACTTCATACAAAACCTCCAACCGCACTAAAAACCGTTCTGCATTAAAAAGAATCGAAGAAGAAGATGAAGAAGGAGAGTACCCATGTCCCATTTGTAGTgaagttttcaataaaattagtttgttaGACAAACATGCTAAAATCCACGATGGCGCGAAAGTGCACGTTTGTAAAGTGTGTAATAAGGACTTTGTTAGGTTCAACCATTTGAAAAGACATATGACTTCACATTCTTTCATTAGGCCATTTTCGTGTGAAATTTGCCCTAAGAGGTTTTCAAGAAGAGACCATTTGCAACAACATATCAAGTTGCATGATAAGAAGCAAGAATACCAATGTGATGTTTGTTTGAAGATGTTTCACAGAGCGGATCAGTTGGCTAAGCATAAGGTTTCAAAGCACAGCGCGGGAGAGAAGcttttggGAGAGAAGAAATTCGAGTGTCATGTTTGCCTGAAAACCTTCACAACGGAGAAGTACCGTGATGTTCATGTCAAAGGCCACATGGGTGAAAAACGGTTTCAATGCAAGACCTGCGATAAATGTTTCTTATCGAAGTCGCACCTCACTGAACACATGAAGTTTCACAACGAGCATTCAAAGAAGTTTCTCTGTTCAGAATGTGGTCAAAGATTCATTCGTAACGATTATCTGGTCATTCATATGAGGAGGCATCGAGGCGAAAAACCTTTCAAATGCAAATATTGCGGTAAAGGTTTTCCAAGGACTACCGATCTCACTGTACACGAACGTTACCACACCGGAGAAAAGACCCATTTGTGTACAATTTGCGGACGAGGTTTTGGAAGGGCGTACAATTTGACAGTTCACATGCGGACCCATACAGGGGAAAAGCCGTACAGGTGTACGTACTGTGAGGCTGCTTTTGCTCAAGGAAATGATCTCAAAGCACATGTACGAAGACACACAGGCGAAAGGTTCCAGTGCGAGTTGTGCACTGAAAGTTTCCTCATGGGCTATCTCCTAACGCAGCATAAAAGGACGGTTCATGGTTTGAATGTCGTCAGCAATATCCGCCGCCTCCAACCTGTGAACAAAATCAAACAAGACGCGGACGAACCGCCCCCGATTACAATTCCGTTGCCTAAGCCGGTGGTACCTGATATTCTTTTGACCAACATTCAAGCCCACTTAACGGCACAAATTCAACACCACCCGCATTCGTTAGCTAGAGAATAA
Protein Sequence
MAQVEYDLNRICRTCKTESTQMRSVFEGYEMLHECPRIDEMLMACTSVQVRVEDRLPKLICVNCTEQLKGAYVFKQQCQEVDASLREYVKNFTEDIKVELQNAESGITESFSDTPPQEASKQSTNSPENSDFIEFMENNQMILTCRECGKVFTTLEGLRSHKRIHLGTLFKCRYCGKGYTRQTHVYRHELSHGKHKLHVCRICNKTLTRMEHLKRHLTTHLKEKPYSCKSCNRGFNRSDHLEVHALRCKGERVHICDICNRGFSREDSLEVHKRLHENQKPALPTLDNIDNIEEHYYEIDYDPNMEYTASSDVDDYLEPHVEVTENFDEEKMKEVADLQNEDSLQKRESEQMDIKQILDSQVDIEISESDIIIDEDKKIVSGNFQSEDYGNDQETEVHNDVPADNDSDSAHSEYLPTRMVKKRGRGRPRKNPATSYKTSNRTKNRSALKRIEEEDEEGEYPCPICSEVFNKISLLDKHAKIHDGAKVHVCKVCNKDFVRFNHLKRHMTSHSFIRPFSCEICPKRFSRRDHLQQHIKLHDKKQEYQCDVCLKMFHRADQLAKHKVSKHSAGEKLLGEKKFECHVCLKTFTTEKYRDVHVKGHMGEKRFQCKTCDKCFLSKSHLTEHMKFHNEHSKKFLCSECGQRFIRNDYLVIHMRRHRGEKPFKCKYCGKGFPRTTDLTVHERYHTGEKTHLCTICGRGFGRAYNLTVHMRTHTGEKPYRCTYCEAAFAQGNDLKAHVRRHTGERFQCELCTESFLMGYLLTQHKRTVHGLNVVSNIRRLQPVNKIKQDADEPPPITIPLPKPVVPDILLTNIQAHLTAQIQHHPHSLARE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01410167;
90% Identity
iTF_00753179;
80% Identity
-