Basic Information

Gene Symbol
TRERF1
Assembly
GCA_030157275.1
Location
CM058058.1:31982407-31994990[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.4e-11 2.2e-08 34.4 0.1 2 46 1172 1216 1171 1216 0.96

Sequence Information

Coding Sequence
atgttccTCCGGGAGCCGAGAGAGGATGCAGATGTCTCCTCACAAATAGCCCTGATGCCCCATTCAAAGCGTGGGAACGAAGCCGTTACAGCCACCTTCGACCTGTTCGACTCGTCGAGTGGCCCAGATCTGACTCTGTCCCCGCAGACCTTCACGAATTCAGCTGAGGCCTTTATCAACGACAACTCCAACAGTCTGGGAGTCCCAGCGGACGCCGATGCAGTCACAACGACGACGGAGGATAAAAAGCCcgccaacaacaacaacaacaacaacaattcTTCAGAAGTGGTGAAGCTCACCGTGAAGAGAGCTCGTCCGAAGGCGGCGTCCCCCAACCGCCAAGGCCCCCAACAGTGCCAGGTATGTGCCAAAGTGTTTGGAAACGCCTCCGCCTTGGCCAAACACAAGCTGACCCACAGCGACGAACGGAAATACGTCTGTACCATGTGTGGGAAAGCGTTTAAGCGGCAGGACCACCTGAACGGTCACATGTTGACCCATCGCAACAAGAAACCCTACGAGTGCAAAGCTGAAGGCTGTGGCAAAAGTTACTGTGATGCTAGATCTTTGCGGCGACACACAGAAAACCATCACAGCTCGGCGACGGTCAACACCACCACGACGACGATGTCGCCGGCTCAAGGAGCGGCGTCCGGAGATGCAGCTTCACCACATGGGTCTAGTTGCATACAATATGCGCCGCCTCCGACGTCTACCAGCAACGGAAAGAGTCAGCTGCAACAGCTGCTGGCCACGGAGCCGGCAAAGAGCGGAAGTGGCGGCAACAACGATGGGTTAACCAAACAGCAACTGGATCTAATACATCAAATAATGGAACAAACCCAGAGACAATCCCAATCCGCCAGTAAACCGACTACAAAGCCGACCACAAAACCCATTAACAAAACACCAGTCAAAGTGCAGAGAGTGTGGACGTCAACGACGCAGCAGACTTCATCAAACAAAACAAGTGGGAGCGCTACGAGTCCGCAGGCGAAAGTTACCACCACTACCCCGTCGACGTCCCCGGCCGCCACAACCGCCCCCAACAAACCAGAACCCAAGCCCGTCGAATGCAACCTATGTCACAGGAAATTCAAGAACATACCCGCCCTCAATGGGCACATGCGGCTGCATGGGGGCTACTTCAAAAAGGACgccgaaaacaaaaaatgcgaaaaaaagGACGCCGGGGGCCCTCCTTTGCAGACCGCGAGCGTTAGTGTGCGTGCCCTCATCGaagagaaaataataaacaaacgcATAACGAACCCCCAaacgtcgtcgtcgtcgtcgtcgtcgtcgtcgtcgtcgtcgtcctCCTCCTCGTCATCATCGTCATCTTCTACTTCTTCGGAAGAACCACAACAAAAATCGACGGCTCCGCCTTTGTTTCCTTTAACTGTGCATTCCTCTGCAAACAACTCCAGCGACCTGGACACGAAAATCACCTCTTTCGTCGTACCGGCACCCCCTCAACAGACGGCGGAGAAAGCACGAAGACATTCCGATGCCGAGGCATTCAACGTATCCAGGACTTCGACGACGCAGCAAAAGGCTGAAGCTCTGGCAGATCTCATCCTGAAGAGAGACAAAGTCTCCGTTAAACGTACTACCTCTGATCCCGGACAATCCTCGCAGATCATACAGTTTCAATCGGCGGACTCCTTCACGTTAACGGGAGTTACGTATCAAGAAGATGGAGAATATTTGTCGCCGAGTCTTCAAGATGAAGTCTTCACGCAGGTGCAGGACACGATGCTGTTGCAAGGAGTCGATCCGCATCAGCTGGCGTCGATACAGTTCCAAACGGATACGTTGCTGCAGGATCAAAACGATCAGCAGTTGCAGGACATCGCGTTAGAGGACTACACTAATCTACAAGAAGCGGTGGTCCAGAGTCCGTCGTACCAGTCGGGACACTCCGTTAATCAAGAATTGCAAGCCGTGTTGGATTCCCCGCTTCCGGAGAGTTTAGCAGAGTTCAGCACGTTTCACTCCACGACAAATTTGGACATACCTTCTCCGGGTTACCAAACGCAATCACCCGCACAGTTCACGGGATCACCTCATACATCCCTCACGGCGCAGTCACCTCTTCAGAGTCCTCTGATTCGACACGATTCTCCAGGTTTCGCCTATCCGACGCCTCCCGCTAGTCACGAAGGCCAAAGTCCGTGCTTCGCTCAAAGCACCCTCCTTCCTATGGTCTCCCCTAAGCAAAACGAGTTCGGACAAGTCGTAGAGCGCGGCGTCGACGAACCCCCTCAAGCTTCGAGTCCTTTATCGGCAGCTTTCTTTACATCCACCATGTCGAGTTCGGCCGCCGTCGAAGAAGCGTTAGAAGAGGTCCTCCCCGGAGAAAGCATTCCCACAGATGACATCTACCCTTTGACGAATTCTCCTCCTCCTCAGTCACCTCTTTCGGTAGGGTTAACGCCGGTACCGTCGCCCCTTTCGAACATCGTGACGACTTCCCCGTCACCGCACCCTTCGACGACGTTCACACCCTCACCCAGTACAGTTACCTTCCCCATGTCCCCTCATTACACCCTCCAGTCGCAAATGATGCCCAATTCCGAAGATCCTCTCTTATCGAGTAGTCCCAAAGACTTCGCCGCGCGCAAAAAATTCGAGTTTAACGGTGTTCCTCTCCGTGTCATCAGCAACAACGGACTTCTCGACCTCAACAGTTCCAATTTTGCCGGTATTCTAGTCGACGCTAACGGTGAGATCAAGTTCATCCAAACCGGAGGTAATACCTTCCAAGCCAAGAATTTCCTGTTGGCAAACACCCTGATTCCACAACAAGGGGACGAAAAGAACGCCgcccaaaaacaaacaaaggtGCTCAAAATTCCAACGAAACAAATCATCGCAAGGCCTAAGCAGATAAACGATTTGAAAAGAGAAGAAAACAACGACGTGTTTCTTAGTCCTACAACGATACCGGCGAGTCCTGTGAGAACGTCACGGAAACGGCCTAGAAGCGAGCCGTTGCAGCTTCCGGTTTTGCACCAATCGAAGTTGAGGGCGACCAGGAGTAAACCTCAGGGGTTTGCTCCTTACACGCCCCAGCCGATCTTGAACCCCCAGAGATCCGGAACGGGGCTGTACGCCAACATCAAGGTCAAatcagAGGAAGAAACGAGTTGGAACAACGATCCCACACCAGAGAGCGACTCGACGCCCCACATCAACGTGGGTCCTCAGTTTCAATGCACGATACCTCCTTTTACGTCGGCTCCCAACAGGACGAACCCCGAGCCAACTTACGAGGACCTCCTCTGGGACCCCGGCATAAGCGGCTGCACAGACAGTGAAGTTGACATGTACTTGGATTTCGCGTGCTGCGCTGCAGTTCCCGGTGGAGGGAGGAACAAGGAGTACGCCATGCATCTCTTGCACATGTGTGGCGGAAACATACACGATGCGATGTTGAAGTTGATGCAACCCGCCCCCATCCTCCCTTCAGATCACCCTCTCTTGTGCTACCAGTACAACGAGAGCGACAAGTGGACGTCGTCGGAAACCGACGTCTTTCACAAAGCTTTGCTAAAGCACGACAAGGATTTCCGTAGCATTGCTCAAGAGATCGGGACGAAGACCATCAAACAATGTATACAATTCTACTACGTTTGGAAAAAGGTGTGTCTCGACGAGTACCGGAAGCTCAAGTACCTGCGAGAACGGAGACATAACCATAAAGGTGCAGAGTCGGACGTGGAGGAGAAACCGTATCCTGATGCCAAACTCTTAGGGATTGTAGATAGTGGTTCTCCAATGCCTGTCCCTGAGACCAGGAGTTTTATATGCGAATTCGCAGACTGCTCAGCTAGTTTTAACTCTCGCGCCGCCCTCAACGGGCACATACGAATCCACGGCGGTACCGCCAGAAATTCCCCGACGCCGTCTGCAAACGCAGACAAGCGCACTTCCTCAGTAAGTTCAACCGTATGTCATCCCGATTCGACAGAAGATTACCCCTGTAAGATATGCGGGAAAGTCTTTACAAAGATCAAGAGCCGGAGTGCCCACATGAAATCGCATCGACCACCGGATGCAGAACCCGTAAAACGCAGAGAAAAAGAATCACATCCTTCGTGcataacaacaacaacaacaacaacaacaacaacaacaacaagcTTTGAACTTTCCGTGCCAAGCCCGTATAATACTTag
Protein Sequence
MFLREPREDADVSSQIALMPHSKRGNEAVTATFDLFDSSSGPDLTLSPQTFTNSAEAFINDNSNSLGVPADADAVTTTTEDKKPANNNNNNNNSSEVVKLTVKRARPKAASPNRQGPQQCQVCAKVFGNASALAKHKLTHSDERKYVCTMCGKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSSATVNTTTTTMSPAQGAASGDAASPHGSSCIQYAPPPTSTSNGKSQLQQLLATEPAKSGSGGNNDGLTKQQLDLIHQIMEQTQRQSQSASKPTTKPTTKPINKTPVKVQRVWTSTTQQTSSNKTSGSATSPQAKVTTTTPSTSPAATTAPNKPEPKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAENKKCEKKDAGGPPLQTASVSVRALIEEKIINKRITNPQTSSSSSSSSSSSSSSSSSSSSSSTSSEEPQQKSTAPPLFPLTVHSSANNSSDLDTKITSFVVPAPPQQTAEKARRHSDAEAFNVSRTSTTQQKAEALADLILKRDKVSVKRTTSDPGQSSQIIQFQSADSFTLTGVTYQEDGEYLSPSLQDEVFTQVQDTMLLQGVDPHQLASIQFQTDTLLQDQNDQQLQDIALEDYTNLQEAVVQSPSYQSGHSVNQELQAVLDSPLPESLAEFSTFHSTTNLDIPSPGYQTQSPAQFTGSPHTSLTAQSPLQSPLIRHDSPGFAYPTPPASHEGQSPCFAQSTLLPMVSPKQNEFGQVVERGVDEPPQASSPLSAAFFTSTMSSSAAVEEALEEVLPGESIPTDDIYPLTNSPPPQSPLSVGLTPVPSPLSNIVTTSPSPHPSTTFTPSPSTVTFPMSPHYTLQSQMMPNSEDPLLSSSPKDFAARKKFEFNGVPLRVISNNGLLDLNSSNFAGILVDANGEIKFIQTGGNTFQAKNFLLANTLIPQQGDEKNAAQKQTKVLKIPTKQIIARPKQINDLKREENNDVFLSPTTIPASPVRTSRKRPRSEPLQLPVLHQSKLRATRSKPQGFAPYTPQPILNPQRSGTGLYANIKVKSEEETSWNNDPTPESDSTPHINVGPQFQCTIPPFTSAPNRTNPEPTYEDLLWDPGISGCTDSEVDMYLDFACCAAVPGGGRNKEYAMHLLHMCGGNIHDAMLKLMQPAPILPSDHPLLCYQYNESDKWTSSETDVFHKALLKHDKDFRSIAQEIGTKTIKQCIQFYYVWKKVCLDEYRKLKYLRERRHNHKGAESDVEEKPYPDAKLLGIVDSGSPMPVPETRSFICEFADCSASFNSRAALNGHIRIHGGTARNSPTPSANADKRTSSVSSTVCHPDSTEDYPCKICGKVFTKIKSRSAHMKSHRPPDAEPVKRREKESHPSCITTTTTTTTTTTTSFELSVPSPYNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01480056;
90% Identity
iTF_01410263;
80% Identity
iTF_00415402;