Cstr013958.1
Basic Information
- Insect
- Cydia strobilella
- Gene Symbol
- XBP1
- Assembly
- GCA_947568885.1
- Location
- OX387681.1:18361693-18364801[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.1 7.3e+03 -2.3 0.1 16 25 29 38 27 39 0.73 2 3 1.8e-18 2.1e-15 57.0 10.3 2 52 43 93 43 96 0.97 3 3 0.00011 0.14 12.8 1.8 33 55 88 110 87 113 0.93
Sequence Information
- Coding Sequence
- ATGAGTGCTCCGATAATCATTACGGTACCGAACAACTACCTGGCGGTGGATGAGGACACGAAGGTGGTTCTGGAGCCGGCGTCGCCCGCCCCGTCGCGGAAGCGCCGGCTGGACCACCTTTCCTGGGAGGAGAAGATGCAAAGAAAGAAACTGAAGAATCGTGTGGCGGCTCAAACGTCCCGCGATCGCAAGAAAGCCAAGATGGACGAGATGGAATCCAGGATCCAGGAGCTGGCTGACAGGAACGAGCGGCTGATTAGTGAGGTGGAAAGCCTCAAGGCGCTGAACGAGCGTCTGTTGAGCGAGAACGCGGAGCTGCGCGCGGAGCGCAGTGTCTCGGGGGCCCGGGGACCGGCAGAGTCTACTCCTCGGCAGCAGGATGGGCCCCCGACGGCACTGCGCGCGGCGCGCCTGCTGCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCCAGCACCTCGAGTCCGAAGAGTACCTTGACACCTTACAACAGCTTGCCGACTCACTCATCAAGGAAATTGATGCAGGCAGTTCAGGAGCGGCTCAAGATGTCCCAGTGCGGGACACTGGAGAGCGCGCTGAAGGAGCTGAAGTGGTGGGGCCCGCAGCAGAGCACCTGGAACCCAGTGAAGATGCAATCGTAG
- Protein Sequence
- MSAPIIITVPNNYLAVDEDTKVVLEPASPAPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRIQELADRNERLISEVESLKALNERLLSENAELRAERSVSGARGPAESTPRQQDGPPTALRAARLLLAMCLLSQTSSSTSSPKSTLTPYNSLPTHSSRKLMQAVQERLKMSQCGTLESALKELKWWGPQQSTWNPVKMQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01019964;
- 90% Identity
- iTF_00410020; iTF_00411140; iTF_01133462; iTF_00871038;
- 80% Identity
- -