Cpom015390.1
Basic Information
- Insect
- Cydia pomonella
- Gene Symbol
- XBP1
- Assembly
- GCA_033807575.1
- Location
- CM066352.1:4038966-4041941[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.4 1.2e+04 -2.3 0.1 16 25 29 38 27 39 0.73 2 3 8.5e-19 1.6e-15 58.1 11.2 2 52 43 93 43 96 0.97 3 3 0.00012 0.21 12.9 1.7 33 55 88 110 87 113 0.93
Sequence Information
- Coding Sequence
- ATGAGTGCTCCTATAATCATCACGGTACCGAACAACTACCTGGCGGTGGATGAGGACACGAAGGTGGTTCTGGAGCCGGCGTCGCCCGCCCCGTCGCGGAAGCGCCGGCTGGACCACCTTTCCTGGGAGGAGAAGATGCAAAGAAAAAAGCTGAAAAATCGTGTGGCGGCACAAACGTCGCGCGATCGCAAGAAAGCTAAGATGGATGAGATGGAGTCTAAGATCCAGGAGTTGGCTGACAGGAATGAGCGGCTGTTAAGCGAGGTGGAAAGCCTCAAGGCGCTGAATGAGCGTCTGTTGAGCGAGAACGCGGAGCTGCGCGCGGAGCGCAGTGTCTCGGGGGCCCGGGGACCGGCAGAGTCTACTCCTCGGCAGCAGGAGGGGCCCCCGACGGCACTGCGCGCGGCGCGTCTGCTGCTGGCGATGTGTCTCCTCTCACAGACCTCCTCCAGCACCTCGAGTCCGAAGAGTACCTGGACACCTTACAACAGCTTGCCGACTCACTCTTCAAGGAAATTGATGCAGGCAGTGCAGGAGCGGCTCAAGATGTCCCAGTGCGGGACACTGGAGAGCGCGCTGAAGGAGCTGAAGTGGTGGGGCCCGCAGCAGAGCACCTGGAACCCAGTGAAGGTGCAGTCGTAG
- Protein Sequence
- MSAPIIITVPNNYLAVDEDTKVVLEPASPAPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESKIQELADRNERLLSEVESLKALNERLLSENAELRAERSVSGARGPAESTPRQQEGPPTALRAARLLLAMCLLSQTSSSTSSPKSTWTPYNSLPTHSSRKLMQAVQERLKMSQCGTLESALKELKWWGPQQSTWNPVKVQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01019964;
- 90% Identity
- iTF_00412258;
- 80% Identity
- -