Lstr017112.1
Basic Information
- Insect
- Lathronympha strigana
- Gene Symbol
- XBP1_1
- Assembly
- GCA_949128165.1
- Location
- OX421909.1:4325339-4329073[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.4 1.2e+04 -2.3 0.1 16 25 29 38 27 39 0.73 2 3 1.6e-17 3.1e-14 54.0 9.7 2 52 43 93 43 96 0.97 3 3 0.00012 0.23 12.8 1.8 33 55 88 110 87 113 0.93
Sequence Information
- Coding Sequence
- ATGAGTGCTCCGATAATCATCACATTGCCGAACAACTACCTGACGGTGGATGAGGACACGAAGGTGGTGCTGGAGCCGGCGTCGCCCGCCCCGTCGCGGAAGCGCCGGCTGGACCACCTTTCTTGGGAGGAGAAGATGCAAAGAAAGAAACTGAAGAATCGCGTGGCGGCGCAAACCTCCCGCGACCGCAAAAAAGCCAAGATGGATGAGATGGATGCAAGGATCCAAGAGTTGGCTGATAGGAATGAGCGGCTGATAAGTGAGGTGGAAAGCCTAAAGGCGCTGAACGAGCGTCTGTTGAGCGAGAACGCGGAGCTGCGCGCGGAGCGCAGTGTCTCGGGGGCCCGGGGACCGGCAGAGTCTACTCCTCGGCGGCAGGAGGGGCCCCCGACGGCACTGCGCGCGGCGCGGGTGCTCCTGGCGATGTGTCTCCTCTCACAGACCTCCTCCAGCACCTTGAATCTGAAGAGTACCTGGACACCCTCCATCAGCTTGCCGACTCACTCCTCAAAGAAATTGATGCAGGCTGTGCAGGAGCGGCTCAAGATGTCCCAGTGCGGGACACTGGAGAGCGCCCTCAAGGAGCTCAAGTGGTGGGGCCCGCAGCAGAGCACCTGGAACCCTGTGAAGATGGAGTCGTAG
- Protein Sequence
- MSAPIIITLPNNYLTVDEDTKVVLEPASPAPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMDARIQELADRNERLISEVESLKALNERLLSENAELRAERSVSGARGPAESTPRRQEGPPTALRAARVLLAMCLLSQTSSSTLNLKSTWTPSISLPTHSSKKLMQAVQERLKMSQCGTLESALKELKWWGPQQSTWNPVKMES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01019964;
- 90% Identity
- iTF_00412258;
- 80% Identity
- -