Basic Information

Insect: Cydia fagiglandana
Gene Symbol: -
Assembly: GCA_963556715.1
Location: OY750816.1:2201272-2202867[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.012 24 6.1 0.4 16 44 78 103 74 103 0.87

2 14 0.053 1e+02 4.0 2.8 9 43 103 132 99 133 0.84

3 14 0.00049 0.97 10.5 5.8 6 43 127 161 124 162 0.82

4 14 0.00032 0.62 11.1 0.7 7 44 158 192 157 192 0.91

5 14 0.0031 6.1 8.0 0.3 11 42 192 220 189 222 0.74

6 14 0.0014 2.8 9.1 0.5 11 44 222 252 218 252 0.84

7 14 0.0038 7.5 7.7 0.5 15 38 255 275 253 280 0.84

8 14 5.9 1.2e+04 -2.5 0.1 18 28 296 306 291 308 0.80

9 14 4.8e-06 0.0094 17.0 2.7 3 44 311 349 309 349 0.89

10 14 0.0081 16 6.6 2.1 17 43 353 376 352 377 0.91

11 14 0.47 9.1e+02 1.0 4.9 16 43 382 406 376 407 0.72

12 14 0.0053 10 7.2 2.6 9 29 404 424 397 435 0.79

13 14 5.5 1.1e+04 -2.4 0.9 18 27 441 450 424 463 0.63

14 14 3.5 6.8e+03 -1.8 0.3 17 29 493 505 487 515 0.69

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.012	24	6.1	0.4	16	44	78	103	74	103	0.87
2	14	0.053	1e+02	4.0	2.8	9	43	103	132	99	133	0.84
3	14	0.00049	0.97	10.5	5.8	6	43	127	161	124	162	0.82
4	14	0.00032	0.62	11.1	0.7	7	44	158	192	157	192	0.91
5	14	0.0031	6.1	8.0	0.3	11	42	192	220	189	222	0.74
6	14	0.0014	2.8	9.1	0.5	11	44	222	252	218	252	0.84
7	14	0.0038	7.5	7.7	0.5	15	38	255	275	253	280	0.84
8	14	5.9	1.2e+04	-2.5	0.1	18	28	296	306	291	308	0.80
9	14	4.8e-06	0.0094	17.0	2.7	3	44	311	349	309	349	0.89
10	14	0.0081	16	6.6	2.1	17	43	353	376	352	377	0.91
11	14	0.47	9.1e+02	1.0	4.9	16	43	382	406	376	407	0.72
12	14	0.0053	10	7.2	2.6	9	29	404	424	397	435	0.79
13	14	5.5	1.1e+04	-2.4	0.9	18	27	441	450	424	463	0.63
14	14	3.5	6.8e+03	-1.8	0.3	17	29	493	505	487	515	0.69

Sequence Information

Coding Sequence: ATGGATCAAGAAATAGAACAGATCTTTATAAAACCAGATATTGCACATTTGAAAGTTGAAGTTGATTGCGAACAGGAAAGCAGTGGAAACCCGTACCAGCCTCCGGAACATGTGTTCAACATCAAGAGTGAAGACAGAAGTATTTTACCTTACATAGACTCAACCAATGAAAATGATAAAACAAACTCAGTAGAGATAGTTGGTAAAGTATACGAGAACGGAAAAATAAACCGATTGCAATGTCCACAATGTGATAATACTTTCAAAAACAGAGCCAACTTGAAGCAGCATCTCAAGTTTGTGCATTCGTCCGAAGATGATATTGTTGAATGTGAGAAATGTTACCGGACTTTCAAGTCTGTCGGTCATTTACGCTCACACATTCACTCTGTTCACGCTGAAGAAAAAGAAGTGAGCTGCGAACATTGCGGTAAAGTGTTCTCAAACAAAAAACGACTTAACAATCATATTTTCTATTCCCACCCGGAACCGGAAGAAAGCGTCAATTGCAGTGTATGCTCCAAATCTTTCAAGCGTAGATACAATTTGAAAATACATATGAGACTTGTCCATCCTTCCGACGACAGATCGGTACAATGCCCACATTGCGATAAGAAATTTAAAGTAGATATGTTACTACAGAGACATATAAAATGGAGTCACCCTCAAGACGGAATGATGTACCGCTGCCCCGAATGCGGGAGAACATTGCCATCTATCGCTTGCTTTAGAAAACACATGCAGAACGTACATTCAGGCTCCCAAGATGCTGTTTGCAAAATCTGCTCCAAAGTTTTCAAAACAGTCAAAACTTTAAACAGACATGAGAGAAACATTCACGGAGGAGCGAAAGCTGAAGCCAAACCGTGCAAAGTAGGAGATATACCATGTTCACAGTGCGACAAAAAATTCACGACAAATACAGCATTATTTTGGCATTTCGAGAGACATCATTCCGAGAATAAAAGAAGTAATACTTGTCAGATATGTAACAAAGAGTTATCCGATCAAGGGAGTTTGAAGAGACATTTAGAAATGGTGCATTCCTTTGATCCTGTCAACTGTCCTATATGCTCAAAAACTTTTAAAAGTCACATGAATCTACAGAGGCATATTAGAGTCACCCATGCTCCACCAGAAGCGGCCCAGAAATGCGACATTTGTAATAAAACTTTCAAATGCTCTATGCATTTAAGGATACATATAAACGCAGTCCACTCCACAGAAGGCATATTCACCTGTGATATTTGCAATAAGGAATTCTCCTCAAAGAAATATATGTTGAAACACAAGAAAACCCATGTAGATGTCAAGCTCTTTCCATGTGGAGTTTGTAGCAAAATGTTTAAATGTGTTAATGAtgttaaaaaacatacaaaacgTGTGCATATGAAGACACCAGTTAAAACAGAAAATGTAGAACCTGAAAGTAAAGAAGCTGAAAGCCTTAAAGATATGGAAGCTAATACAGAAGCACTGACTTGTTCGAAATGTGGTGGTGATTTTGAGAATGAAACAGAGTTACATTCGCATATTGTGAACTGTGGTGAGCTCCCAGCGGTGGCGTTTGTGAAGGCTGAATTGGAAGATTGGTAG
Protein Sequence: MDQEIEQIFIKPDIAHLKVEVDCEQESSGNPYQPPEHVFNIKSEDRSILPYIDSTNENDKTNSVEIVGKVYENGKINRLQCPQCDNTFKNRANLKQHLKFVHSSEDDIVECEKCYRTFKSVGHLRSHIHSVHAEEKEVSCEHCGKVFSNKKRLNNHIFYSHPEPEESVNCSVCSKSFKRRYNLKIHMRLVHPSDDRSVQCPHCDKKFKVDMLLQRHIKWSHPQDGMMYRCPECGRTLPSIACFRKHMQNVHSGSQDAVCKICSKVFKTVKTLNRHERNIHGGAKAEAKPCKVGDIPCSQCDKKFTTNTALFWHFERHHSENKRSNTCQICNKELSDQGSLKRHLEMVHSFDPVNCPICSKTFKSHMNLQRHIRVTHAPPEAAQKCDICNKTFKCSMHLRIHINAVHSTEGIFTCDICNKEFSSKKYMLKHKKTHVDVKLFPCGVCSKMFKCVNDVKKHTKRVHMKTPVKTENVEPESKEAESLKDMEANTEALTCSKCGGDFENETELHSHIVNCGELPAVAFVKAELEDW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00148678;
90% Identity: iTF_00409524;
80% Identity: iTF_00411056;