Camp015062.1
Basic Information
- Insect
- Cydia amplana
- Gene Symbol
- -
- Assembly
- GCA_948474715.1
- Location
- OX419669.1:10139087-10164544[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-10 1.7e-05 24.8 0.0 4 77 35 111 33 120 0.83
Sequence Information
- Coding Sequence
- ATGGGTAAAGACATGTCAACTATTCGCAGGTACGACAAGTGGGACCGAGACCGGGACCGCGGCGGCGGGGGCGGCGCCGGCGCGCCCGCGTGGCCGGGCCGCGACCGCGAGCGCGACCGGGAGCGCGAGCGGCAGGCGCGCGCGCACCAGATGTCGCAGGCGCACGCCGCCGAGCCGGACGCCACCGCGTCGCTCTTCCAGGCTCCCTCCAGGGTAACGGGCAACAAGGATCGCCAAAGCCAGCAGATCCAGACGAAGCTCGGCGACTACCAGATCGCGCAGGCGCTGATCGATGATCCCAGCAAATCGATCGGCATCTGCGCAGAGCCACCCAGCCCGGCGCCATGTGAGTACTTAATGCAATAG
- Protein Sequence
- MGKDMSTIRRYDKWDRDRDRGGGGGAGAPAWPGRDRERDRERERQARAHQMSQAHAAEPDATASLFQAPSRVTGNKDRQSQQIQTKLGDYQIAQALIDDPSKSIGICAEPPSPAPCEYLMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01030245;
- 90% Identity
- iTF_00660327; iTF_00658410; iTF_00155308; iTF_00411471; iTF_00772890;
- 80% Identity
- -