Cper023075.1
Basic Information
- Insect
- Cydalima perspectalis
- Gene Symbol
- Znf639
- Assembly
- GCA_951394215.1
- Location
- OX596229.1:3203251-3206148[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0061 0.47 11.5 0.9 1 23 34 57 34 57 0.90 2 19 0.52 40 5.5 0.2 2 23 86 108 85 108 0.93 3 19 0.12 9 7.5 0.6 1 23 130 152 130 152 0.98 4 19 0.00046 0.036 15.0 0.1 1 23 156 178 156 178 0.96 5 19 0.0012 0.097 13.7 0.4 1 23 183 206 183 206 0.89 6 19 0.0013 0.1 13.6 4.4 1 23 212 235 212 235 0.95 7 19 0.00017 0.013 16.4 0.2 1 23 242 265 242 265 0.98 8 19 3.3e-05 0.0026 18.6 1.1 1 23 271 293 271 293 0.96 9 19 2.5e-07 2e-05 25.3 1.2 1 23 299 321 299 321 0.99 10 19 0.24 19 6.5 2.6 1 13 327 339 327 340 0.91 11 19 0.13 10 7.3 0.2 1 23 463 486 463 486 0.95 12 19 0.1 7.9 7.7 0.2 3 23 512 533 510 533 0.95 13 19 0.048 3.7 8.7 0.1 1 23 557 579 557 579 0.96 14 19 0.00053 0.041 14.9 0.2 1 23 583 605 583 605 0.98 15 19 0.00042 0.033 15.2 0.5 1 23 610 633 610 633 0.96 16 19 0.003 0.23 12.5 0.3 2 23 640 662 640 662 0.93 17 19 0.024 1.8 9.7 6.3 1 23 669 692 669 692 0.96 18 19 4.4e-05 0.0035 18.2 4.9 2 23 699 720 698 720 0.96 19 19 2.7e-05 0.0021 18.9 0.6 1 23 726 748 726 748 0.99
Sequence Information
- Coding Sequence
- ATGAAGAGTCTGAACGATGAGCTGAAAGCCAGGAAGAAACGAGCCACAATCCTTCTAGAATTTTCCAGAATATGCCCCTTCAGATGGATGAAGAATCTGTATCTATGCTTCTACTGTGAGCAGCAGTTTTCGGACCCTGCGATGCTTAGGGAACATCATATATTTGAGCACAGTTCTTTATCGTCTGTGCAAATCAGACAGGCCATTGCAAAGCTAAAGAAATACGAACTTATCAAAGTTGATATTACGAATGTCAGTTGCAAAATCTGTGATGACTACATTGAAAATTTCAGCGAGCTCAAATCTCACTTGTTAATGAAACACAAGAAATGTATAGACCCTAAATCTAGCGATGGACTTCTCCCATTCATGGTAACGAAGGAAGAGTTTCAATGCGCGCTGTGTAGTGACAAATACGCGGAGTTCAAGACTTTAAACCAGCATATGAATATCCATTTCCAGAATTTCATTTGCGAGCAATGCGGCACTGGATTTATTACTCCGGAAAGGTTGAGGACTCATGCGCTTTCGCACGAGAGTGGCTCATTTCAGTGCGACGGGTGCGATAAAGTATTCAGGTCTACCAACGCGAAGAATGAGCATTATGCTAACGTCCATATGCAAGTGAAGAGGCACAGGTGTCCTCACTGCCCAGAGACATTCCGGAATTACTTCCAAAGGAACAAACATATATCGAATGTTCACGGACTGAAGCTGAAGGAGTTTAAATGCACGATGTGTCCTAGAGTTTTCTCGTTAAGTGGCAAATTAGGAGTCCACGTGAAGACAGTTCATTTGAAATTGAAGCGGCATGCGTGTGAACTGTGTGAATGGAAGTTTTACTCCAAATCCGAACTAAGGGAGCATATGATTAAACACGGTGGAGAGAGGAAGTACCAGtgtaatgtttgtaaaaaagcaTACGCTAGGAAGTATACTTTGAGGGAGCATATGAGGATTCATGATAATGATAGGAGATTCGTGTGCACAACTTGCGGGAGATCGTTCGTGCAGAACTGTAGAGCCGACCAGGCAATTTTACCGGATAAACCGAGACAGAAAAGGACCGTGCCTCTCTTTCAAGTGGCGTACGACCGCACCTTGTGTAGGCCTCTGGGGACGATAAAAGACTTCAGTAAGCTCGTTCGACGTAGACAAGTGCCCAAAATGGTAGCTGCAGTATCTAAAGTATTCACGCCATCTCGAAGTCCCTCACCCGTATCTATGGGTCGAAGGTCTCCGTCGCCTTTCAAAGATGTCGCTCCTCCAGAAACAAACGTCATTGCCCCACTTAAACCGAAGCAAAAGAATCCTGACGTTCGTCAAAATGCTCTAACCATCTTTGAATTCTCGACCGTATACCCCTTTATATACGGCAACAACAAATTCAAATGCTTCATCTGTTCTCAGCCGTTCTTAGAAACGGCTTTGCTTAGACTGCACATGAATGAAGCTCACACTTTCGCGCCGTTGAAAAGGTTAGTGAATAATAGACGTGAGAACATTCTGAAGGTAGACGTGAGCGAAATCGCTTGCAAAATCTGCACTTTACACCTTCCAGGCTTGTCTGACTTGAAGATCCATCTCAAATTGGACCATGAAAAGCCAATTGATCCGGAATTGAAGGACAATATAATACCTTTCAAACTGGAGGCGACGGAAGGCGGATACAAATGTGTCATATGTGACGAGAATTTCATCAAAGTCCGTATTCTGGTGATACATATGAgtgtacattttaataactacaGCTGTGAAGTATGCGGCTCAGGATTCATGACTTTGAGGCTGCTGAAGAAGCATTTGGAAGTTCACGAAAGCGGGAACTTCCCATGCGATAGATGCAGCAAGGTCTTCAGTACGGCTTACAAGAGAACTCTTCATATAAGAGGGGTTCATATGAAGCAGTACCCTCGGCGATGTCCAATATGTCCGGAGAGGTTCAACTCGAATTATAAACGGACGATTCATTTGCAAGACGTCCATAATCAGTCTACACGAGTCCACAAATGTGAAACATGCGGGCGAGCTTTCAATTTGAAGTACCACTTGATATGTCATACTCGTTCTGTGCATCTCCAAGAGAGGAATCAACAGTGTGACATTTGTCATCAGAGGTTTTGCAATAAAGAGACGCTGAAAAGGCATATGGTGATACATACAGGGGAGAAGAATTATAAGTGTGAGGTCTGCGGTATGGCCTTCTTGAGGAGGAAGAATCTGAAGGATCACTTGAGATTGCACGAAATAGGTTGA
- Protein Sequence
- MKSLNDELKARKKRATILLEFSRICPFRWMKNLYLCFYCEQQFSDPAMLREHHIFEHSSLSSVQIRQAIAKLKKYELIKVDITNVSCKICDDYIENFSELKSHLLMKHKKCIDPKSSDGLLPFMVTKEEFQCALCSDKYAEFKTLNQHMNIHFQNFICEQCGTGFITPERLRTHALSHESGSFQCDGCDKVFRSTNAKNEHYANVHMQVKRHRCPHCPETFRNYFQRNKHISNVHGLKLKEFKCTMCPRVFSLSGKLGVHVKTVHLKLKRHACELCEWKFYSKSELREHMIKHGGERKYQCNVCKKAYARKYTLREHMRIHDNDRRFVCTTCGRSFVQNCRADQAILPDKPRQKRTVPLFQVAYDRTLCRPLGTIKDFSKLVRRRQVPKMVAAVSKVFTPSRSPSPVSMGRRSPSPFKDVAPPETNVIAPLKPKQKNPDVRQNALTIFEFSTVYPFIYGNNKFKCFICSQPFLETALLRLHMNEAHTFAPLKRLVNNRRENILKVDVSEIACKICTLHLPGLSDLKIHLKLDHEKPIDPELKDNIIPFKLEATEGGYKCVICDENFIKVRILVIHMSVHFNNYSCEVCGSGFMTLRLLKKHLEVHESGNFPCDRCSKVFSTAYKRTLHIRGVHMKQYPRRCPICPERFNSNYKRTIHLQDVHNQSTRVHKCETCGRAFNLKYHLICHTRSVHLQERNQQCDICHQRFCNKETLKRHMVIHTGEKNYKCEVCGMAFLRRKNLKDHLRLHEIG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00961159; iTF_00365120;
- 90% Identity
- -
- 80% Identity
- -