Cper022412.1
Basic Information
- Insect
- Cydalima perspectalis
- Gene Symbol
- -
- Assembly
- GCA_951394215.1
- Location
- OX596228.1:1047403-1049757[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0021 2.3 8.9 1.6 18 43 9 31 7 32 0.93 2 19 2.9 3.2e+03 -1.2 0.3 18 43 37 59 33 60 0.66 3 19 2e-05 0.022 15.3 0.1 18 43 68 90 61 91 0.93 4 19 0.00091 0.99 10.0 0.6 17 43 98 121 95 122 0.88 5 19 0.063 68 4.1 0.4 18 43 129 151 124 152 0.88 6 19 0.00013 0.14 12.7 3.3 14 43 155 181 150 182 0.86 7 19 0.15 1.7e+02 2.9 6.0 3 43 173 210 172 211 0.85 8 19 0.022 24 5.6 2.6 16 43 217 241 209 242 0.79 9 19 0.1 1.1e+02 3.5 0.7 18 43 316 338 308 339 0.90 10 19 1.4 1.5e+03 -0.2 0.0 17 27 374 384 370 398 0.79 11 19 0.027 30 5.3 4.1 13 43 417 444 413 445 0.87 12 19 0.7 7.6e+02 0.8 9.8 5 29 438 462 434 474 0.71 13 19 0.002 2.2 8.9 3.2 13 43 475 502 467 503 0.78 14 19 0.063 69 4.1 0.8 17 44 508 532 504 532 0.85 15 19 0.52 5.7e+02 1.2 1.0 18 28 539 549 535 562 0.82 16 19 0.97 1.1e+03 0.3 0.1 19 43 570 591 565 592 0.74 17 19 4.3e-05 0.047 14.2 0.7 18 43 635 657 625 658 0.88 18 19 1.4 1.6e+03 -0.2 0.1 12 28 672 688 665 702 0.84 19 19 4 4.3e+03 -1.7 0.1 11 26 699 716 689 717 0.69
Sequence Information
- Coding Sequence
- ATGTATCAAAATCTCCTAGACTTCATTTGCGATTACTGCAACCGCACCTTCACAAGAAAGTACAACCTTCAAACTCACATAGAGAACTGCCACCTTAATTCGTCATGCTACTGCGAGATTTGCGATCAACGTTTCGGAAGCCCTGCCGGCCTCCAGCTCCACTTGAACCGTGGCCACAACAGATACGCCCAGCCGTACCCAGAATGCGACATCTGTGGAAGAATCTTCACCAGGAAACAGAACCTTATGTCCCACATGATTACGGTGCATTTTCAAGGGAGCGGACCTCAGATTAAATGTCAGCTTTGCGAGAAAACGTTTACCACTGAAAAGAATTTGAGACGGCATACAAATCAGTTACATAATCCTGATGTGCAGTATCCAACATGTGATGACTGTAAGAAGGTATTCAAAGGGAAGCATTCTTTGATAGCTCACATCCAAGCGATTCACAGCTCTGGGAAGGGTATGATCAAGTGTAACATGTGCGATAAGGTTTATACGAATAACAGGAATTTGAAGAGGCATGTGGAGATTTTTCATGGAGATAAAGGAGAATTTCGATGCGATTTGTGTCCTAAAGTGTACACTTCTAATCATAGTCTGAAACGCCATACTAAGTCGCACCATTGCACAGACGATACCGAGCAGTACACTTGTGACTACtgcaataaaaacatatacGGGAGAGATAATTTGGACTCACACATTTCATACTTTCACAAGCAAGACAACTCGATGGACTGCAGCGATGTCGTATCGTCTAAAACGAATGATTTCGCTTGCGATTCCTGCTCGAAAGTCTTTGAAGAAGAGCCTCTTTTACGACAGCACGTTAAAGCCGATCATTCGTTCAAGATATTTTACGAGTACTGCAGAAATTACCTTCTGCTGCAAACGGGAACAACGCCTGAACCCAACATTCACAGCAAAGTTGTTTTATACAAATGCGAATTCTGTCATTATTCATTCTCGAGCGTTTACGAGCTTAAAGATCACATGAGGATTAACCATGATAAAGAATATAGTTTATCGACTTGCAACGTGTGCTTTAGCAAGTTTTACAGCAAGGAAACGATAGCTGATCATAAGAAAATCTGTCTTCCACCTCCAGACGTGAATGCTTGCAGCCACTGCGATAAGCTCTTCACCGATATATCCAGCCTAGAGTTCCACACGCGAATCTTCCATCCTCAAGCACAAATAGCAGACTCCAATATAACTTCTACGAATGAGAATGAAACTCCTGATACTAATTCGTACAAATGCGAGCATTGTGATCGTATTTACTACAGTGATAGATCACTGAAGCATCATATTAAGTTAAAACATACGACGGATGAAGCGATGGAATGCGAATACTGTGGGAAAATCTGCAGCAACAAATACTATTTGGCTTCGCACATTAAAATAGTGCACAGCAATGATTCCTGGTCTAAATGTGGTTACTGCGATAAACAGTTCAAATCGAAGAGGAACATTCGTCGCCACATTGAATACACTCATCTGGGGATGCAAAGGTACAAGTGTATTGAGTGTGAAACTCTGTTTAAAGAGAAACGGAGTCTTCGGAAGCATGTTAGGACTAAGCATCCTAACTCCACTGCCTTTCCCCAATGCCACATTTGCCATAAAAGATTCGAATCGGCTAAATCTTGCAAAATACACCTGAAATTGCTACACTCGTTCAACATGAATACTTTTCCCTGTGACTTGTGTTCTGTTTCATTCAGTTCCAATGAAGCGTTGTCTATACATTTGCAAACGAAGCATTTAGCGGAAGATGAAATATACAAATGTGAGGAGTGCAATCTAGTATTCAAAGGGCAAGAGAAATTTGAGCAGCACAATAATGTATGCCCAGTCAATCTTGAGCCTAATAGCAAGCAGAAGATGCTGCCTAGATGTATCATCTGTATGAAAGACTTCAGCACAAGGAAGACGTTGAAGAGGCACATAAAGAAATTTCATGAGGAATTTGATGTGGATGAATTGGCTACGTTCGGGTCGAGGCGAAGAGACTTCGTTGTAGAATGCGACGATTGTCTCAAGAAGTTTAACGATGATGCTCATTTCAACTTGTATCAGAAGCTGAAGCATTTGAGAGACGCTTCCATCTTTACTTGTGAGACGTGCTCAGCATCATACAATCCATTTGAATACTACATTCAGAGATACAAGCTGACTACTTTCGATATTAGCAAGAGTAAGATGATTCTGAGTGAGTTGTGTACAGCAGAGATGAGTGATGAGGAGTCTTCGTATATGGGATTCGGGTCTCTTCATGAGACTATGGAGGCGGAGAGTACTACCAGCGATATCAAGTTGGAACCTGTTGATGAGGTTTCGGAGTGA
- Protein Sequence
- MYQNLLDFICDYCNRTFTRKYNLQTHIENCHLNSSCYCEICDQRFGSPAGLQLHLNRGHNRYAQPYPECDICGRIFTRKQNLMSHMITVHFQGSGPQIKCQLCEKTFTTEKNLRRHTNQLHNPDVQYPTCDDCKKVFKGKHSLIAHIQAIHSSGKGMIKCNMCDKVYTNNRNLKRHVEIFHGDKGEFRCDLCPKVYTSNHSLKRHTKSHHCTDDTEQYTCDYCNKNIYGRDNLDSHISYFHKQDNSMDCSDVVSSKTNDFACDSCSKVFEEEPLLRQHVKADHSFKIFYEYCRNYLLLQTGTTPEPNIHSKVVLYKCEFCHYSFSSVYELKDHMRINHDKEYSLSTCNVCFSKFYSKETIADHKKICLPPPDVNACSHCDKLFTDISSLEFHTRIFHPQAQIADSNITSTNENETPDTNSYKCEHCDRIYYSDRSLKHHIKLKHTTDEAMECEYCGKICSNKYYLASHIKIVHSNDSWSKCGYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSTAFPQCHICHKRFESAKSCKIHLKLLHSFNMNTFPCDLCSVSFSSNEALSIHLQTKHLAEDEIYKCEECNLVFKGQEKFEQHNNVCPVNLEPNSKQKMLPRCIICMKDFSTRKTLKRHIKKFHEEFDVDELATFGSRRRDFVVECDDCLKKFNDDAHFNLYQKLKHLRDASIFTCETCSASYNPFEYYIQRYKLTTFDISKSKMILSELCTAEMSDEESSYMGFGSLHETMEAESTTSDIKLEPVDEVSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00365110;
- 90% Identity
- iTF_00408639;
- 80% Identity
- iTF_00408639;