Basic Information

Insect: Cyclophora punctaria
Gene Symbol: Prdm14
Assembly: GCA_951394245.1
Location: OX596178.1:8713396-8729173[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 2.6e-05 0.0019 18.9 1.8 1 23 448 470 448 470 0.97

2 20 0.0084 0.62 11.0 0.6 1 20 476 495 476 498 0.92

3 20 0.001 0.076 13.9 4.3 1 23 516 538 516 538 0.96

4 20 9.4e-05 0.007 17.2 4.1 1 23 544 566 544 566 0.99

5 20 3.6e-05 0.0026 18.5 5.3 1 23 572 594 572 594 0.97

6 20 4.9e-07 3.7e-05 24.3 5.9 1 23 600 622 600 622 0.98

7 20 2.4e-07 1.8e-05 25.3 2.3 1 23 628 650 628 650 0.98

8 20 9.8e-05 0.0073 17.1 6.7 1 23 656 678 656 678 0.97

9 20 9.7e-05 0.0072 17.1 6.5 1 23 684 706 684 706 0.97

10 20 4.7e-07 3.5e-05 24.4 1.9 1 23 712 734 712 734 0.98

11 20 4.8e-05 0.0036 18.1 7.9 1 23 740 762 740 762 0.98

12 20 2.4e-05 0.0018 19.0 6.6 1 23 768 790 768 790 0.98

13 20 3.2e-06 0.00024 21.8 5.8 1 23 796 818 796 818 0.98

14 20 4.7e-06 0.00035 21.3 5.5 1 23 824 846 824 846 0.96

15 20 2.2e-06 0.00016 22.3 5.0 1 23 852 874 852 874 0.98

16 20 2.3e-06 0.00017 22.2 3.8 2 23 881 902 880 902 0.98

17 20 3.8e-06 0.00028 21.5 7.1 1 23 908 930 908 930 0.97

18 20 2.3e-05 0.0017 19.1 5.0 1 23 936 958 936 958 0.98

19 20 0.00043 0.032 15.1 0.3 1 23 965 987 965 987 0.97

20 20 0.026 1.9 9.5 5.6 1 23 997 1019 997 1019 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	2.6e-05	0.0019	18.9	1.8	1	23	448	470	448	470	0.97
2	20	0.0084	0.62	11.0	0.6	1	20	476	495	476	498	0.92
3	20	0.001	0.076	13.9	4.3	1	23	516	538	516	538	0.96
4	20	9.4e-05	0.007	17.2	4.1	1	23	544	566	544	566	0.99
5	20	3.6e-05	0.0026	18.5	5.3	1	23	572	594	572	594	0.97
6	20	4.9e-07	3.7e-05	24.3	5.9	1	23	600	622	600	622	0.98
7	20	2.4e-07	1.8e-05	25.3	2.3	1	23	628	650	628	650	0.98
8	20	9.8e-05	0.0073	17.1	6.7	1	23	656	678	656	678	0.97
9	20	9.7e-05	0.0072	17.1	6.5	1	23	684	706	684	706	0.97
10	20	4.7e-07	3.5e-05	24.4	1.9	1	23	712	734	712	734	0.98
11	20	4.8e-05	0.0036	18.1	7.9	1	23	740	762	740	762	0.98
12	20	2.4e-05	0.0018	19.0	6.6	1	23	768	790	768	790	0.98
13	20	3.2e-06	0.00024	21.8	5.8	1	23	796	818	796	818	0.98
14	20	4.7e-06	0.00035	21.3	5.5	1	23	824	846	824	846	0.96
15	20	2.2e-06	0.00016	22.3	5.0	1	23	852	874	852	874	0.98
16	20	2.3e-06	0.00017	22.2	3.8	2	23	881	902	880	902	0.98
17	20	3.8e-06	0.00028	21.5	7.1	1	23	908	930	908	930	0.97
18	20	2.3e-05	0.0017	19.1	5.0	1	23	936	958	936	958	0.98
19	20	0.00043	0.032	15.1	0.3	1	23	965	987	965	987	0.97
20	20	0.026	1.9	9.5	5.6	1	23	997	1019	997	1019	0.99

Sequence Information

Coding Sequence: ATGAATCCTGAACATCATAATATCAATACGGGTGGCGGCCAGCCCCCTGGGACTTCAGAGTCACAGAGCCAGAGAGTGCAAGCTGGCCAGCAACAGCAACAGCAGCAGCAGCAAAACAACCTTCCTGCGACGTCGTCGGCGACAGATTTGAGAGTGAATTCGGCCGCTGTGAATGTCGCTTTGTCGAGTGTCGCAAAGTATTGGGTGTTTACAAATTTATTCCCCGGACCGATCCCACAAGTGTCCGTTTATGGATTACCGACTGGAACTAGAATTGAGAATGGAAAACCTGTGCAGGACCTTGGTCAAGCACATGCCAGTATACTCAATGGTGACCCGAACATCATCCTTGGTCATCATGGAGGTCAACCACAGGTCACGGTGTCGGCACCAAATGGCCAACAAATACCTGTGTCACAGATTATTGCATCACCTGCTACAGGACAGACACATGAAACCTTGGTGGCCCACAGTCAACAACAAGACCTTGGCCAGCAAGCGTCCAACAGCGGTCAAGTGTCGGTCACAACCGGGCAGGCAACACACCAGGTACCCAATAACCGGGTCGAATTTGTACAACACCATAACATTGATATGGTAAATCAAGTGGGCCATCATTCGCAGCAGCATATAATGCAGCAACAACTGATCTCAGGGCGACCGGAACCTAACCAACAGaTCCAAGTAACGGTTAGCGAAGATGGCATAGTCACTGTTGTGGAACCCGGCAATAGTAAACTGGTTGAGAAGGAGGAACTACATGAAACTATCAAGCTGCCCGCAGACCACACACTGACTGTACATCAGTTACAACAGATCGTTGGGCAACAGGTGCTAGACAGCGTGGTCCGCATCGAGCAGGCGACGGGCGAGCCGGCCAACATCCTGGTGACGCACAACGCCGACGGCACCACCTCCATCGAGGCGAGCGCGCAGGAGCCGCTGGCGCTgccgcacgcgcacgcgcacgcgcacacacacacacacgcgcacCAACACGCGCACGCGCAAGTCAAGGACGAGAAGACGCATTCCAAGATAGAGGCGGCGCAGTTCGCTATACCCGCAGAGATTAAAGATATTAAGGGGATTGATTTGAAGAGTGTCGGCGCCATGGGCATGGAAGGTGCAGTAGTCAAGATATCAACGGGTGCTTCGGATCATGACCTCCACGCGATGTACAAAGTTAACGTAGAGGATCTATCACAGCTGCTCGCTTATCACGAAGTGTTTGGCAAACTTAATACTGATGGCCAGCCGTCTAATGCTAAGAATGAAGTTGAAATAGACGTGCCGGGGCCGAGCGCGTCGATGTCCGAGGCGGAGTCGTCGCCGGGACACCATTCCTGTGATATTTGTGGGAAGATATTCGAGTTCCGCTACCAACTAATTGTACACAGACGGTACCACGGCGAAAATAAAGCGTTCGCGTGTCAAGTATGCGGTTCTTCCTTCGCGAACGCAGTCGAATTATCACGCCATGGGAAATGTCATCTGGCTGGCGATCCAGCAGAGAGACAAGCCAAGAGAATGGCCGAGAAACCGTACCTTTGCACTACTTGCCTTAAGACGTTCTTGCGTAAAGAACATCTGAACAATCACATGCGCAGCCATACGGGGGAGACACCTTATAGATGCGAGTTCTGCGCCAAGACGTTCACGCGCAAGGAGCACATGGTGAACCACGTGCGCAAGCACACGGGCGAGACGCCGCACCGCTGCGACATCTGCAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCACACGGGTGAAACGCCTCACCAATGTCAAATGTGCGGCAAGAAGTTTACTAGGAAGGAACATTTAGTGAATCATATGCGATCGCACACGAACGATACGCCGTACAGGTGCGATGTGTGTGGGAAGTCCTTTACGAGGAAAGAACACTTCAACAACCATATACTGTGGCATACTGGCGAAACCCCTCACCGCTGCGACTTCTGCTCGAAAACGTTCACGCGCAAGGAGCACCTGCTGAACCACGTGCGGCAGCACACGGGCGAGTCGCCGCACCGCTGCAACTTCTGCTCGAAGTCGTTCACGCGGCGCGAGCACCTCGTCAACCACGTGCGCCAGCACACCGGCGAGACGCCCTTCCAGTGCGGCTACTGTCCCAAGGCGTTCACCAGGAAGGATCATTTAGTAAACCACGTACGACAACACACCGGCGAATCACCCCACAAGTGTTCGTTCTGTACCAAATCCTTCACCCGTAAAGAACATCTGACGAACCATGTGCGACAACACACGGGCGAATCGCCGCATCGATGCACGTACTGCGCAAAATCATTCACTAGGAAGGAACATTTGACAAACCATGTTAGGCAGCATACGGGTGAAACGCCCCACAAGTGCACGTACTGCCCGCGCGCCTTCACCCGCAAGGAGCACCTCAACAACCACCTGCGCCAGCACACGGGCGTCACGCCGCACGCCTGCTCCTACTGCAACAAGAGCTTCACGCGCAAGGAGCACCTCGTCAACCACGTGCGAAAACATACCGGCGAGACTCCGTTCAAATGCACGTATTGTACGAAGTCGTTCTCCCGGAAGGAACACCTGAACAACCACGTGAACCTGCACACGGGGGAGACGCCGAACAAGTGTCCCTTCTGCACGAAGACTTTCTCTAGGAAGGAACATCTCACTAATCATGTCAGGATCCACACGGGCGAGTCGCCGCACCGCTGCGAGCTGTGCAACAAGACGTTCACGCGCAAGGAGCACCTCACCAACCACATGAAGCAGCACACGGGCGACGCCGCGCACACGTGCAAGGTCTGCCTCAAGCCCTTCACGCGCAAGGAGCACCTGGTCAACCACATGAGATACCACAGCTGCGGCGAGCGGCCGTTCAGCTGCGGCGAGTGCGGCAAGTCGTTCCCGCTGAAGGGGAACCTCATGTTCCACGAGCGCTCGCACAACaaggcgggcggcggcgcgcgcccctTCCGCTGCGACGTCTGCTCCAAGGACTTCATGTGCAAAGGGCACCTGATCACTCACCGCCGCACACACGAAgagggcgcggcgcgcgaTGACGCCGATTGCACCAACAAGTGCGTCAAGCAGGAGCTCGACGAGCGCAAGCTGCAGGACGTCAAGCCTGTTATAGTGACTGAGAATCGGCCGGCGGACAACACTGTAGTCGCACAGACATCGCCTAACGCAGCTGCCGCTGTTATGCAAGTCAATAATCAACAGGTCCGAGTGCCATCATCGACCTCGCCCGAAGTTGCTGCCTTCACACACACAGTGACAACACAGCACCACACTGGAACGGCTATAGCACACCATCCTGTTACGGTCAACTACTAG
Protein Sequence: MNPEHHNINTGGGQPPGTSESQSQRVQAGQQQQQQQQQNNLPATSSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKPVQDLGQAHASILNGDPNIILGHHGGQPQVTVSAPNGQQIPVSQIIASPATGQTHETLVAHSQQQDLGQQASNSGQVSVTTGQATHQVPNNRVEFVQHHNIDMVNQVGHHSQQHIMQQQLISGRPEPNQQIQVTVSEDGIVTVVEPGNSKLVEKEELHETIKLPADHTLTVHQLQQIVGQQVLDSVVRIEQATGEPANILVTHNADGTTSIEASAQEPLALPHAHAHAHTHTHAHQHAHAQVKDEKTHSKIEAAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISTGASDHDLHAMYKVNVEDLSQLLAYHEVFGKLNTDGQPSNAKNEVEIDVPGPSASMSEAESSPGHHSCDICGKIFEFRYQLIVHRRYHGENKAFACQVCGSSFANAVELSRHGKCHLAGDPAERQAKRMAEKPYLCTTCLKTFLRKEHLNNHMRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHQCQMCGKKFTRKEHLVNHMRSHTNDTPYRCDVCGKSFTRKEHFNNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFTRKEHLNNHLRQHTGVTPHACSYCNKSFTRKEHLVNHVRKHTGETPFKCTYCTKSFSRKEHLNNHVNLHTGETPNKCPFCTKTFSRKEHLTNHVRIHTGESPHRCELCNKTFTRKEHLTNHMKQHTGDAAHTCKVCLKPFTRKEHLVNHMRYHSCGERPFSCGECGKSFPLKGNLMFHERSHNKAGGGARPFRCDVCSKDFMCKGHLITHRRTHEEGAARDDADCTNKCVKQELDERKLQDVKPVIVTENRPADNTVVAQTSPNAAAAVMQVNNQQVRVPSSTSPEVAAFTHTVTTQHHTGTAIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00704247;
90% Identity: iTF_00406940;
80% Identity: -