Basic Information

Insect: Cyclophora albipunctata
Gene Symbol: Prdm14
Assembly: GCA_963082685.1
Location: OY720120.1:9119150-9135545[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 2.6e-05 0.002 18.9 1.8 1 23 444 466 444 466 0.97

2 20 0.0084 0.64 11.0 0.6 1 20 472 491 472 494 0.92

3 20 0.001 0.079 13.9 4.3 1 23 512 534 512 534 0.96

4 20 9.4e-05 0.0072 17.2 4.1 1 23 540 562 540 562 0.99

5 20 3.6e-05 0.0027 18.5 5.3 1 23 568 590 568 590 0.97

6 20 2.6e-07 1.9e-05 25.2 5.2 1 23 596 618 596 618 0.98

7 20 2.4e-07 1.9e-05 25.3 2.3 1 23 624 646 624 646 0.98

8 20 9.8e-05 0.0075 17.1 6.7 1 23 652 674 652 674 0.97

9 20 9.7e-05 0.0074 17.1 6.5 1 23 680 702 680 702 0.97

10 20 4.7e-07 3.6e-05 24.4 1.9 1 23 708 730 708 730 0.98

11 20 4.8e-05 0.0037 18.1 7.9 1 23 736 758 736 758 0.98

12 20 2.4e-05 0.0019 19.0 6.6 1 23 764 786 764 786 0.98

13 20 3.2e-06 0.00025 21.8 5.8 1 23 792 814 792 814 0.98

14 20 4.7e-06 0.00036 21.3 5.5 1 23 820 842 820 842 0.96

15 20 2.2e-06 0.00017 22.3 5.0 1 23 848 870 848 870 0.98

16 20 2.3e-06 0.00017 22.3 3.8 2 23 877 898 876 898 0.98

17 20 3.8e-06 0.00029 21.5 7.1 1 23 904 926 904 926 0.97

18 20 2.9e-05 0.0022 18.8 5.4 1 23 932 954 932 954 0.98

19 20 0.00043 0.033 15.1 0.3 1 23 961 983 961 983 0.97

20 20 0.026 2 9.5 5.4 1 23 993 1015 993 1015 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	2.6e-05	0.002	18.9	1.8	1	23	444	466	444	466	0.97
2	20	0.0084	0.64	11.0	0.6	1	20	472	491	472	494	0.92
3	20	0.001	0.079	13.9	4.3	1	23	512	534	512	534	0.96
4	20	9.4e-05	0.0072	17.2	4.1	1	23	540	562	540	562	0.99
5	20	3.6e-05	0.0027	18.5	5.3	1	23	568	590	568	590	0.97
6	20	2.6e-07	1.9e-05	25.2	5.2	1	23	596	618	596	618	0.98
7	20	2.4e-07	1.9e-05	25.3	2.3	1	23	624	646	624	646	0.98
8	20	9.8e-05	0.0075	17.1	6.7	1	23	652	674	652	674	0.97
9	20	9.7e-05	0.0074	17.1	6.5	1	23	680	702	680	702	0.97
10	20	4.7e-07	3.6e-05	24.4	1.9	1	23	708	730	708	730	0.98
11	20	4.8e-05	0.0037	18.1	7.9	1	23	736	758	736	758	0.98
12	20	2.4e-05	0.0019	19.0	6.6	1	23	764	786	764	786	0.98
13	20	3.2e-06	0.00025	21.8	5.8	1	23	792	814	792	814	0.98
14	20	4.7e-06	0.00036	21.3	5.5	1	23	820	842	820	842	0.96
15	20	2.2e-06	0.00017	22.3	5.0	1	23	848	870	848	870	0.98
16	20	2.3e-06	0.00017	22.3	3.8	2	23	877	898	876	898	0.98
17	20	3.8e-06	0.00029	21.5	7.1	1	23	904	926	904	926	0.97
18	20	2.9e-05	0.0022	18.8	5.4	1	23	932	954	932	954	0.98
19	20	0.00043	0.033	15.1	0.3	1	23	961	983	961	983	0.97
20	20	0.026	2	9.5	5.4	1	23	993	1015	993	1015	0.99

Sequence Information

Coding Sequence: ATGAATCCTGAACACCATAATATCAATACGGGTGGCGGCCAGCCCCCTGGGACTTCAGAGTCACAGAGCCAGAGAGTGCAAGCTGGCCAGCAACAGCAGCAGCAGCAAAACAACCTTCCTGCGACGTCGTCGGCGACAGATTTGAGAGTGAATTCGGCCGCTGTGAATGTCGCTTTGTCGAGTGTCGCAAAGTATTGGGTGTTTACAAATTTATTCCCCGGACCGATCCCACAAGTGTCCGTTTATGGATTACCGACTGGAACTAGAATTGAAAATGGAAAACCTGTGCAGGACCTTGGTCAAGCACATGCCAGTATACTCAATGGTGACCCGAACATCATCCTTGGTCATCACGGAGGTCAATCACAGGTCACAGTGTCGGCACCAAATGGCCAACAAATACCTGTGTCACAGATTATTGCAACACCTGCTACAGGACAGACACATGAAACCTTGGTGGCCCACAGTCAACAGCAGGACCTTGGCCAGCAAGCGTCCAATAGCGGTCAAGTGTCAGTCACAACCGGGCAGGCAACACACCAGGTACCCAATAACCGGGTCGAATTTGTACAACACCATAACATTGATATGGTAAATCAAGTGGGCCATCACTCGCAGCAGCATATAATGCAACAACAACTGATCGCAGGGCGACCGGAACCTAACCAACAGaTCCAAGTAACAGTTAGCGAAGATGGCATAGTCACTGTTGTGGAACCCGGCAATAGTAAACTGGTTGAGAAGGAGGAACTACATGAGACTATCAAGCTGCCCGCAGACCACACACTGACTGTACATCAGTTACAACAGATAGTTGGGCAACAGGTGCTCGACAGCGTGGTGCGCATCGAGCAGGCGACGGGCGAGCCGGCCAACATCCTGGTGACGCACAACGCCGACGGCACCACCTCCATCGAGGCGAGCGCGCAGGAGCCGCTGGCGCTGccgcacgcgcacgcgcacgcgcaccCGCACGCGCACCAGCACGCGCACGCGCAGGTCAAGGACGAGAAGTCGCATTCCAAGATAGAGGCGGCGCAGTTCGCTATCCCCGCAGAGATTAAAGATATTAAGGGGATTGATTTGAAGAGTGTCGGCGCCATGGGCATGGAAGGTGCAGTAGTCAAGATATCAACGGGTGCTTCGGATCATGACCTCCACGCGATGTACAAAGTTAACGTGGAGGATCTATCACAGCTGCTCGCTTATCACGAAGTTTTTGGCAAACTTAATACTGATGGCCAGCCGTCTAATGCTAAAAATGAAGTTGAAATAGACGTGCCGGGGCCGAGCGCGTCGATGTCCGAGGCCGAGTCGTCGCCGGGACACCATTCCTGTGATATTTGTGGGAAGATATTCGAGTTCCGCTACCAACTAATTGTACACAGACGGTACCACGGCGAAAATAAAGCGTTCGCGTGTCAAGTATGCGGTTCTTCCTTCGCGAACGCAGTCGAATTATCACGCCATGGGAAATGTCATCTGGCTGGCGATCCAGCAGAGAGACAAGCCAAGAGAATGGCCGAGAAACCGTACCTTTGCACTACTTGCCTTAAGACGTTCTTGCGTAAAGAACATCTGAACAATCACATGCGCAGCCATACGGGGGAGACACCTTATAGATGCGAGTTCTGCGCCAAGACGTTCACGCGCAAGGAGCACATGGTGAACCACGTGCGCAAGCACACGGGCGAGACGCCGCACCGCTGCGACATCTGCAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCACACCGGTGAAACGCCTCACCAATGTGAAATGTGCGGCAAGAAGTTTACTAGGAAGGAACATTTAGTGAATCATATGCGATCGCACACGAACGATACGCCGTACAGGTGCGATGTGTGTGGGAAATCCTTTACGAGGAAAGAACACTTCAACAACCATATACTGTGGCATACTGGCGAAACTCCTCACCGCTGCGACTTCTGCTCGAAAACGTTCACGCGCAAGGAGCACCTGCTGAACCACGTGCGGCAGCACACGGGCGAGTCGCCGCACCGCTGCAACTTCTGCTCCAAGTCGTTCACGCGGCGCGAGCACCTCGTCAACCACGTGCGCCAGCACACCGGCGAGACGCCCTTCCAGTGCGGGTACTGCCCCAAGGCGTTCACCAGGAAGGATCATTTAGTAAACCACGTACGACAACACACCGGCGAATCACCCCACAAGTGTTCGTTCTGTACCAAATCCTTCACCCGAAAAGAACATCTGACGAACCACGTGCGACAACACACGGGCGAATCGCCGCATAGATGCACGTACTGCGCGAAATCATTTACTAGGAAGGAACATTTGACTAACCATGTTAGGCAGCATACGGGTGAAACGCCCCACAAGTGCACGTACTGCCCGCGCGCCTTCACCCGCAAGGAGCACCTCAACAACCACCTGCGCCAGCACACGGGCGTCACGCCGCACGCCTGCTCCTACTGCAACAAGAGCTTCACGCGCAAGGAGCACCTCGTCAACCACGTGCGAAAACATACCGGCGAGACTCCGTTCAAATGCACGTACTGTACGAAGTCGTTCTCCCGGAAGGAACACCTGAACAACCACGTGAACCTGCACACGGGGGAGACGCCCAACAAGTGTCCCTTCTGCACGAAGACTTTCTCTAGGAAGGAACATCTCACTAATCATGTCAGAATCCACACGGGCGAGTCGCCGCACCGCTGCGAGCTGTGCAACAAGACGTTCACGCGCAAGGAGCACCTCACCAACCACATGAAGCAGCACACGGGCGACGCCGCGCACACCTGCAAGGTCTGCCTCAAGCCCTTCACGCGCAAGGAGCACTTGCTCAACCACATGAGATACCACAGCTGCGGCGAGCGGCCGTTCAGCTGCGGCGAGTGCGGCAAGTCGTTCCCGCTGAAGGGCAACCTCATGTTCCACGAGCGCTCGCACAACaaggcgggcggcggcgcgcggccctTCCGCTGCGACGTCTGCTCCAAGGACTTCATGTGCAAAGGGCACCTGATCAGCCACCGCCGCACGCACGAGgagggcgcggcgcgcgaCGACGCCGACTGCACCAACAAGTGCGTCAAGCAGGAGCTCGACGAGCGCAAGCTGCAGGACGTCAAGCCTGTTATAGTGACTGAAAACCGGCCAGCGGACAACACTGTAGTCGCACAGACATCGCCTAACCCAGCTGCCGCTGTTATGCAAGTCAATAATcaaCAGGTCCGAGTGCCATCATCGACCTCGCCCGAAGTTGCTGCCTTCACGCACACAGTAACAACACAGCACCACACGGGAACGGCTATAGCACACCATCCTGTTACGGTCAACTACTAG
Protein Sequence: MNPEHHNINTGGGQPPGTSESQSQRVQAGQQQQQQQNNLPATSSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKPVQDLGQAHASILNGDPNIILGHHGGQSQVTVSAPNGQQIPVSQIIATPATGQTHETLVAHSQQQDLGQQASNSGQVSVTTGQATHQVPNNRVEFVQHHNIDMVNQVGHHSQQHIMQQQLIAGRPEPNQQIQVTVSEDGIVTVVEPGNSKLVEKEELHETIKLPADHTLTVHQLQQIVGQQVLDSVVRIEQATGEPANILVTHNADGTTSIEASAQEPLALPHAHAHAHPHAHQHAHAQVKDEKSHSKIEAAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISTGASDHDLHAMYKVNVEDLSQLLAYHEVFGKLNTDGQPSNAKNEVEIDVPGPSASMSEAESSPGHHSCDICGKIFEFRYQLIVHRRYHGENKAFACQVCGSSFANAVELSRHGKCHLAGDPAERQAKRMAEKPYLCTTCLKTFLRKEHLNNHMRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHQCEMCGKKFTRKEHLVNHMRSHTNDTPYRCDVCGKSFTRKEHFNNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFTRKEHLNNHLRQHTGVTPHACSYCNKSFTRKEHLVNHVRKHTGETPFKCTYCTKSFSRKEHLNNHVNLHTGETPNKCPFCTKTFSRKEHLTNHVRIHTGESPHRCELCNKTFTRKEHLTNHMKQHTGDAAHTCKVCLKPFTRKEHLLNHMRYHSCGERPFSCGECGKSFPLKGNLMFHERSHNKAGGGARPFRCDVCSKDFMCKGHLISHRRTHEEGAARDDADCTNKCVKQELDERKLQDVKPVIVTENRPADNTVVAQTSPNPAAAVMQVNNQQVRVPSSTSPEVAAFTHTVTTQHHTGTAIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00704247;
90% Identity: iTF_00407769;
80% Identity: -